##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR2936642.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 719570 Sequences flagged as poor quality 0 Sequence length 51 %GC 47 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 31.201052017176924 31.0 31.0 33.0 28.0 34.0 2 31.222021485053574 31.0 31.0 34.0 28.0 34.0 3 31.024561891129423 31.0 31.0 34.0 28.0 34.0 4 34.9884667231819 35.0 35.0 37.0 32.0 37.0 5 35.2106744305627 35.0 35.0 37.0 33.0 37.0 6 35.183099628945065 36.0 35.0 37.0 32.0 37.0 7 31.062880609252748 35.0 35.0 37.0 0.0 37.0 8 33.078695609878125 36.0 35.0 37.0 17.0 37.0 9 36.31353586169518 39.0 35.0 39.0 32.0 39.0 10 36.116224967689035 37.0 35.0 39.0 32.0 39.0 11 36.40925969676334 38.0 35.0 39.0 32.0 39.0 12 36.48753422182693 38.0 35.0 39.0 32.0 39.0 13 36.42626012757619 39.0 35.0 39.0 32.0 39.0 14 37.56294314660144 39.0 36.0 41.0 33.0 41.0 15 37.69722334171797 39.0 36.0 41.0 33.0 41.0 16 37.66221493391887 39.0 36.0 41.0 33.0 41.0 17 37.52570840918882 39.0 36.0 41.0 32.0 41.0 18 37.433271259224256 39.0 36.0 40.0 32.0 41.0 19 37.25554011423489 39.0 36.0 40.0 32.0 41.0 20 37.24236002056784 39.0 35.0 40.0 32.0 41.0 21 37.291715885876286 39.0 35.0 40.0 32.0 41.0 22 37.37672776797254 39.0 35.0 40.0 32.0 41.0 23 37.42362938977445 39.0 35.0 41.0 32.0 41.0 24 37.36498047445002 39.0 35.0 41.0 32.0 41.0 25 37.08484511583307 39.0 35.0 40.0 32.0 41.0 26 37.044155537334795 39.0 35.0 40.0 32.0 41.0 27 37.06884806203705 39.0 35.0 40.0 32.0 41.0 28 37.05954389427019 39.0 35.0 40.0 32.0 41.0 29 37.04093972789305 39.0 35.0 41.0 32.0 41.0 30 36.87409286101422 39.0 35.0 40.0 31.0 41.0 31 36.910635518434624 39.0 35.0 40.0 31.0 41.0 32 36.78079964423197 39.0 35.0 40.0 31.0 41.0 33 36.63672887974763 39.0 35.0 40.0 31.0 41.0 34 36.610749475381134 39.0 35.0 40.0 30.0 41.0 35 36.548855566518895 39.0 35.0 40.0 30.0 41.0 36 36.4862431730061 39.0 35.0 40.0 30.0 41.0 37 36.45182261628472 39.0 35.0 40.0 30.0 41.0 38 36.356820045304836 39.0 35.0 40.0 30.0 41.0 39 36.31098572758731 39.0 35.0 40.0 30.0 41.0 40 36.194513389941214 39.0 35.0 40.0 30.0 41.0 41 36.0303709159637 38.0 35.0 40.0 29.0 41.0 42 36.07293939436052 38.0 35.0 40.0 30.0 41.0 43 36.02942729685785 38.0 35.0 40.0 30.0 41.0 44 35.88934502550134 38.0 35.0 40.0 29.0 41.0 45 35.83157580221521 38.0 35.0 40.0 29.0 41.0 46 35.7432341537307 38.0 35.0 40.0 29.0 41.0 47 35.704376224689746 38.0 35.0 40.0 29.0 41.0 48 35.624132468001726 38.0 35.0 40.0 28.0 41.0 49 35.50055032866851 38.0 34.0 40.0 28.0 41.0 50 35.35543032644496 38.0 34.0 40.0 27.0 41.0 51 33.71421126506108 36.0 32.0 39.0 23.0 40.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 7 5.0 8 21.0 9 74.0 10 95.0 11 67.0 12 29.0 13 31.0 14 35.0 15 50.0 16 84.0 17 163.0 18 302.0 19 608.0 20 1059.0 21 1599.0 22 2356.0 23 3109.0 24 4180.0 25 5581.0 26 7200.0 27 8500.0 28 9743.0 29 11679.0 30 14808.0 31 18938.0 32 25415.0 33 36056.0 34 55452.0 35 61211.0 36 71732.0 37 107861.0 38 148211.0 39 123310.0 40 6.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 44.59621718526342 20.35451728115402 23.234987562016205 11.814277971566352 2 32.90534624845394 25.843628833886907 24.312714537848994 16.938310379810165 3 32.99512208680184 25.268007282126824 25.93312672846283 15.803743902608502 4 29.307086176466502 24.65375154606223 27.381491724224187 18.657670553247076 5 27.19554734077296 30.04349820031408 23.561710465972734 19.19924399294023 6 26.093917200550326 36.2139889100435 24.173186764317578 13.518907125088594 7 67.90944591909057 18.353044179162556 10.224578567755744 3.512931333991134 8 78.91004349820031 7.788401406395486 9.14212654779938 4.159428547604819 9 71.83164945731478 8.77871506594216 11.363731117194991 8.025904359548065 10 40.34228775518713 26.543352279833787 18.704782022596827 14.409577942382256 11 32.34501160415248 27.99143933182317 22.988868351932403 16.674680712091945 12 30.195950359242325 23.824089386717066 27.442639354058674 18.537320899981935 13 25.674222104868182 24.124407632335977 29.920091165557206 20.281279097238627 14 20.56575454785497 29.40297677779785 27.511013521964507 22.520255152382674 15 19.87492530261128 27.766026932751505 33.607293244576624 18.751754520060594 16 22.43881762719402 26.730547410258904 30.900815764970744 19.929819197576332 17 22.135858915741345 25.81916978195311 29.176035687980324 22.868935614325224 18 23.408702419500536 27.03600761565935 28.35665744819823 21.198632516641883 19 25.757188320802705 28.34025876565171 25.638923245827367 20.26362966771822 20 27.804800088942006 26.499854079519714 27.766721792181443 17.928624039356837 21 25.906722070125216 28.349708853898857 26.4456550439846 19.29791403199133 22 23.113665105549146 25.803049043178568 27.976847283794488 23.1064385674778 23 23.814917242241897 27.736286949150184 27.776032908542604 20.672762900065315 24 24.070208596800867 25.509957335631 27.825923815612104 22.59391025195603 25 23.719443556568507 27.30422335561516 26.24956571285629 22.726767374960048 26 21.712550551023526 28.082326945258973 27.87998387926123 22.325138624456272 27 22.39587531442389 28.86376586016649 27.521158469641595 21.219200355768027 28 20.70333671498256 28.53426351849021 29.0032936336979 21.759106132829327 29 21.638756479564183 28.884194727406648 28.571230040162877 20.905818752866296 30 22.375446447183737 27.95099851300082 28.606389927317704 21.06716511249774 31 23.00165376544325 27.68681295773865 25.35333602012313 23.958197256694973 32 24.19611712550551 30.2826688160985 25.695067887766303 19.826146170629684 33 23.04848729102103 29.512208680184 25.574023375071224 21.86528065372375 34 22.34667926678433 27.65109718303987 27.853162305265645 22.149061244910154 35 22.273996970412885 28.082882832802923 27.037953222063177 22.605166974721016 36 21.10607724057423 29.96859235376683 27.618021874174854 21.307308531484082 37 21.980627319093347 30.94778826243451 26.644523812832666 20.42706060563948 38 22.4179718442959 29.9035535111247 24.639854357463488 23.038620287115915 39 22.848506747085064 26.570590769487335 27.3049182150451 23.27598426838251 40 23.622024264491294 26.735133482496494 28.568033686785167 21.074808566227052 41 20.198173909418124 27.61941159303473 28.766207596203287 23.41620690134386 42 22.11098294814959 27.778534402490372 28.421001431410424 21.68948121794961 43 22.68938393762942 27.190822296649387 27.355920897202495 22.763872868518696 44 21.508817766165905 27.72808760787693 27.216254151785098 23.546840474172075 45 21.604847339383245 26.251372347374126 26.274580652334034 25.8691996609086 46 21.973122837250024 28.342065400169545 26.362132940506132 23.322678822074295 47 20.803535444779524 27.069082924524366 30.155509540419974 21.971872090276136 48 21.86653140069764 26.347123976819493 28.08802479258446 23.698319829898413 49 20.554636796975974 26.051669747210138 29.85505232291508 23.538641132898814 50 19.799741512292062 26.465666995566796 29.249829759439667 24.484761732701475 51 19.575996775852246 26.465389051794823 27.132315132648664 26.826299039704267 >>END_MODULE >>Per sequence GC content warn #GC Content Count 0 266.0 1 652.5 2 1039.0 3 3170.5 4 5302.0 5 3684.5 6 2067.0 7 1931.0 8 1795.0 9 1781.0 10 1767.0 11 1775.5 12 1784.0 13 1745.0 14 1706.0 15 1592.0 16 1478.0 17 1677.0 18 1876.0 19 1939.0 20 2002.0 21 2699.0 22 3396.0 23 3482.5 24 3569.0 25 4389.0 26 6114.5 27 7020.0 28 9535.5 29 12051.0 30 12893.5 31 13736.0 32 15504.5 33 17273.0 34 19899.5 35 22526.0 36 23741.0 37 24956.0 38 27190.5 39 29425.0 40 33765.0 41 38105.0 42 41930.0 43 45755.0 44 58558.0 45 71361.0 46 65374.5 47 59388.0 48 57695.0 49 56002.0 50 49745.0 51 43488.0 52 40577.0 53 37666.0 54 35056.5 55 32447.0 56 32351.5 57 32256.0 58 32921.0 59 33586.0 60 34654.0 61 35722.0 62 31965.5 63 28209.0 64 23534.5 65 18860.0 66 14289.5 67 9719.0 68 8111.5 69 6504.0 70 5177.0 71 3850.0 72 3282.0 73 2714.0 74 2327.5 75 1350.5 76 760.0 77 615.0 78 470.0 79 354.5 80 239.0 81 173.5 82 108.0 83 86.5 84 65.0 85 67.5 86 70.0 87 46.5 88 23.0 89 16.5 90 10.0 91 7.0 92 4.0 93 3.0 94 2.0 95 2.5 96 3.0 97 1.5 98 0.0 99 0.0 100 0.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 44 0.0 45 0.0 46 0.0 47 0.0 48 0.0 49 0.0 50 0.0 51 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 51 719570.0 >>END_MODULE >>Sequence Duplication Levels fail #Total Deduplicated Percentage 29.679882968541637 #Duplication Level Percentage of deduplicated Percentage of total 1 73.62962002912425 21.853185054825968 2 9.009998585587491 5.3483140713392485 3 3.7696601312849554 3.356492145831443 4 2.1241096498366288 2.521733032780044 5 1.463722102856445 2.172155035562348 6 1.0785542078813166 1.9206817599087365 7 0.7994784627985678 1.6609899048211745 8 0.6511856441617352 1.5461690967611759 9 0.5060222146867118 1.351681210024547 >10 6.543380445095119 45.47692386511593 >50 0.3671107733690852 6.550999188791239 >100 0.05065199277750659 2.6623002512309766 >500 0.0037175774515601167 0.7526380599371828 >1k 0.0027881830886700874 2.825737323070002 >5k 0.0 0.0 >10k+ 0.0 0.0 >>END_MODULE >>Overrepresented sequences warn #Sequence Count Percentage Possible Source GAATCTGTCTCTTATACACATCTGACGCTACAACGTTCGTATGCCGTCTTC 4826 0.6706783217755048 No Hit GAATGATACGGCTGTCTCTTATACACATCTGACGCTACAACGTTCGTATGC 4497 0.6249565712856289 No Hit GAATGATACCTGTCTCTTATACACATCTGACGCTACAACGTTCGTATGCCG 4339 0.6029990132996095 No Hit CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 2732 0.37967119251775366 No Hit GCTGTCTCTTATACACATCTGACGCTACAACGTTCGTATGCCGTCTTCTGC 2224 0.3090734744361216 No Hit GAATGCTGTCTCTTATACACATCTGACGCTACAACGTTCGTATGCCGTCTT 1870 0.25987742679655906 No Hit GAACTGTCTCTTATACACATCTGACGCTACAACGTTCGTATGCCGTCTTCT 940 0.13063357282821686 No Hit GAATGACTGTCTCTTATACACATCTGACGCTACAACGTTCGTATGCCGTCT 891 0.12382395041483107 No Hit GAATGATCTGTCTCTTATACACATCTGACGCTACAACGTTCGTATGCCGTC 780 0.1083980710702225 No Hit >>END_MODULE >>Adapter Content fail #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.10172742054282419 0.0 2 0.0 0.0 0.0 0.6396875912003002 0.0 3 0.0 0.0 0.0 0.8070097419292077 0.0 4 0.0 0.0 0.0 1.1730616896201898 0.0 5 0.0 0.0 0.0 2.4263101574551467 0.0 6 0.0 0.0 0.0 3.0694720458051337 0.0 7 0.0 0.0 0.0 3.510985727587309 0.0 8 0.0 0.0 0.0 4.198479647567297 0.0 9 0.0 0.0 0.0 4.427922231332602 0.0 10 0.0 0.0 0.0 5.609322234112039 0.0 11 0.0 0.0 0.0 6.331837069360868 0.0 12 0.0 0.0 0.0 7.595230484872911 0.0 13 0.0 0.0 0.0 7.928207123698876 0.0 14 0.0 0.0 0.0 8.097474880831609 0.0 15 0.0 0.0 0.0 8.408216017899578 0.0 16 0.0 0.0 0.0 8.884194727406646 0.0 17 0.0 0.0 0.0 9.390747251830955 0.0 18 0.0 0.0 0.0 9.960254040607586 0.0 19 0.0 0.0 0.0 10.309490390094084 0.0 20 0.0 0.0 0.0 10.656920105062746 0.0 21 0.0 0.0 0.0 11.098294814958933 0.0 22 0.0 0.0 0.0 11.538279805995247 0.0 23 0.0 0.0 0.0 11.977014050057674 0.0 24 0.0 0.0 0.0 12.330141612351822 0.0 25 0.0 0.0 0.0 12.628514251566909 0.0 26 0.0 0.0 0.0 12.921328015342496 0.0 27 0.0 0.0 0.0 13.210111594424449 0.0 28 0.0 0.0 0.0 13.519324040746557 0.0 29 0.0 0.0 0.0 13.842433675667413 0.0 30 0.0 0.0 0.0 14.201120113401059 0.0 31 0.0 0.0 0.0 14.555359450783106 0.0 32 0.0 0.0 0.0 14.911822338340954 0.0 33 0.0 0.0 0.0 15.25133065580833 0.0 34 0.0 0.0 0.0 15.60487513376044 0.0 35 0.0 0.0 0.0 15.968425587503647 0.0 36 0.0 0.0 0.0 16.33114220993093 0.0 37 0.0 0.0 0.0 16.69191322595439 0.0 38 0.0 0.0 0.0 17.039620884695026 0.0 39 0.0 0.0 0.0 17.40942507330767 0.0 >>END_MODULE >>Kmer Content fail #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position TGCGACG 35 1.2110831E-7 45.000004 1 TCCGAAC 20 7.031526E-4 45.0 35 CGACCCT 20 7.031526E-4 45.0 12 CCCGTCG 20 7.031526E-4 45.0 15 TCGCTCG 20 7.031526E-4 45.0 13 GTCGTAG 25 3.889347E-5 45.0 1 GTCGTAC 20 7.031526E-4 45.0 22 TTACGCG 20 7.031526E-4 45.0 1 GACGATA 20 7.031526E-4 45.0 9 GCTCGAC 20 7.031526E-4 45.0 16 TCGCGCC 20 7.031526E-4 45.0 17 TCGACGG 75 0.0 42.0 2 ATAGCGG 55 6.002665E-11 40.909092 2 ACGGGTA 75 0.0 39.0 5 TACGGCT 630 0.0 38.928574 7 CGTTTTT 1410 0.0 38.617023 1 ATGGGCG 205 0.0 38.41463 5 ACGGCTG 690 0.0 38.152176 8 CGTATGG 65 9.094947E-12 38.076927 2 AGGACGT 30 1.13949754E-4 37.500004 5 >>END_MODULE