##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR2936636.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 1214409 Sequences flagged as poor quality 0 Sequence length 51 %GC 45 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 31.116607337396214 31.0 31.0 33.0 28.0 34.0 2 31.203922237071694 31.0 31.0 34.0 28.0 34.0 3 30.852757184770535 31.0 31.0 34.0 27.0 34.0 4 34.791038274584594 35.0 35.0 37.0 32.0 37.0 5 35.127573165218635 35.0 35.0 37.0 33.0 37.0 6 35.13619217248884 36.0 35.0 37.0 32.0 37.0 7 31.11217390516704 35.0 35.0 37.0 0.0 37.0 8 33.1314030116707 36.0 35.0 37.0 17.0 37.0 9 36.46817340780577 39.0 35.0 39.0 32.0 39.0 10 36.22517702026253 37.0 35.0 39.0 32.0 39.0 11 36.49257869465723 38.0 35.0 39.0 32.0 39.0 12 36.62130468400679 39.0 35.0 39.0 32.0 39.0 13 36.680264227290806 39.0 35.0 39.0 32.0 39.0 14 37.79650513130255 40.0 37.0 41.0 33.0 41.0 15 37.939161353382595 40.0 37.0 41.0 33.0 41.0 16 37.82939108652851 40.0 37.0 41.0 33.0 41.0 17 37.694418437281016 39.0 36.0 41.0 33.0 41.0 18 37.53181012327807 39.0 36.0 40.0 33.0 41.0 19 37.254163959588574 39.0 36.0 40.0 32.0 41.0 20 37.171608576682154 39.0 35.0 40.0 32.0 41.0 21 37.13205271041305 39.0 35.0 40.0 32.0 41.0 22 37.19265255774619 39.0 35.0 40.0 32.0 41.0 23 37.22900439637717 39.0 35.0 40.0 32.0 41.0 24 37.14233672510662 39.0 35.0 40.0 32.0 41.0 25 36.805166134308955 39.0 35.0 40.0 31.0 41.0 26 36.813860075147666 39.0 35.0 40.0 31.0 41.0 27 36.85379637337997 39.0 35.0 40.0 31.0 41.0 28 36.835037454432566 39.0 35.0 40.0 31.0 41.0 29 36.79679992490174 39.0 35.0 40.0 31.0 41.0 30 36.50803641936119 39.0 35.0 40.0 31.0 41.0 31 36.40908705386735 39.0 35.0 40.0 30.0 41.0 32 36.11752630291772 38.0 35.0 40.0 30.0 41.0 33 35.834889234187166 38.0 35.0 40.0 28.0 41.0 34 35.570027066663705 38.0 35.0 40.0 26.0 41.0 35 35.3899954628136 38.0 35.0 40.0 25.0 41.0 36 35.2851246985159 38.0 35.0 40.0 24.0 41.0 37 35.19720621306331 38.0 35.0 40.0 24.0 41.0 38 35.074731000840735 38.0 34.0 40.0 23.0 41.0 39 35.00946797989804 38.0 34.0 40.0 23.0 41.0 40 34.915003100273466 38.0 34.0 40.0 23.0 41.0 41 34.75127160618869 38.0 34.0 40.0 23.0 41.0 42 34.73989240857075 38.0 34.0 40.0 23.0 41.0 43 34.7029402779459 38.0 34.0 40.0 23.0 41.0 44 34.513153311610836 38.0 34.0 40.0 22.0 41.0 45 34.425396221536566 38.0 34.0 40.0 22.0 41.0 46 34.321532531461806 38.0 33.0 40.0 22.0 41.0 47 34.2838253010312 38.0 33.0 40.0 22.0 41.0 48 34.195964456785156 37.0 33.0 40.0 21.0 41.0 49 34.08126586677141 37.0 33.0 40.0 20.0 41.0 50 33.930861019640005 37.0 33.0 40.0 20.0 41.0 51 32.46008799341902 35.0 31.0 39.0 17.0 40.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 7 7.0 8 48.0 9 92.0 10 114.0 11 87.0 12 56.0 13 69.0 14 78.0 15 111.0 16 215.0 17 400.0 18 822.0 19 1395.0 20 2227.0 21 3735.0 22 5501.0 23 8147.0 24 12241.0 25 18024.0 26 23387.0 27 25052.0 28 24740.0 29 25037.0 30 27617.0 31 32908.0 32 42264.0 33 57070.0 34 83772.0 35 98793.0 36 118755.0 37 176968.0 38 235860.0 39 188805.0 40 12.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 40.04968672004242 19.823716721466987 21.427377432150124 18.699219126340466 2 38.99666422103262 21.560034551786096 23.412458241004472 16.030842986176815 3 31.452006696261307 21.549494445446303 31.675983955981877 15.322514902310507 4 27.048053827005564 23.951979934272554 31.061116971300446 17.938849267421435 5 23.819240470055806 28.494518732980406 30.093403457978322 17.592837338985465 6 24.522051467009877 32.35820880774105 29.71420666348817 13.405533061760904 7 65.68075500099225 17.213722889076084 13.744381011669052 3.3611410982626113 8 76.8988042743425 5.077449195452274 14.470989592468436 3.5527569377367922 9 70.97534685596038 7.248546412287787 16.322342802136678 5.453763929615146 10 36.480460866149706 26.365911319827173 23.130263362672707 14.023364451350409 11 27.126939935392443 25.530772581560246 30.01583486288392 17.326452620163387 12 24.31355498847588 23.326737532412885 33.43412310020759 18.925584378903647 13 22.645006748138393 23.262755793147118 34.901256495958116 19.190980962756367 14 19.459918363582617 25.590472402625476 34.8439446677355 20.10566456605641 15 19.37600923576818 25.606035528392823 36.33915756553188 18.67879767030712 16 22.440380464901033 25.307454078485915 34.496038813941595 17.756126642671454 17 22.39500860089146 25.093769891362793 33.22035656850369 19.29086493924205 18 23.34353582689193 24.81421003961598 32.920375260723524 18.921878872768566 19 22.810437010924655 26.601581510018452 31.462958525504998 19.12502295355189 20 24.653061695030257 25.49281172982084 31.925817414067254 17.928309161081646 21 23.881822351448317 26.051519710410574 32.27784049690014 17.788817441240965 22 23.596169000723812 23.256909327911764 32.6259110398556 20.521010631508823 23 22.278655708249858 25.727658474204322 32.92185746317756 19.071828354368257 24 21.519438673461742 24.20576593223535 33.98369083233079 20.29110456197212 25 22.134882070208636 26.29542435867982 31.653009817944366 19.916683753167177 26 21.46080933194665 26.293448088741105 31.969048318976554 20.276694260335688 27 21.424660060984397 25.87884312451571 32.243749840457376 20.45274697404252 28 19.855831107971035 26.63707202433447 32.54743665437262 20.95966021332187 29 21.172603299217975 26.372334197127984 31.99861002347644 20.4564524801776 30 21.466408763439667 24.6706834353171 32.497618183000945 21.36528961824229 31 21.656130677555915 25.334627790143188 31.161824393593925 21.847417138706977 32 22.11478999249841 25.881066428196757 30.879464826100595 21.124678753204236 33 21.90275269699088 25.71382458463335 30.1080607933571 22.27536192501867 34 20.968882806369187 26.751201613295027 31.65515077704464 20.62476480329115 35 20.677877057894005 27.189439472204175 30.8968395326451 21.235843937256725 36 21.211222907603617 29.754226129747064 28.497977205373147 20.536573757276173 37 21.221927703104967 28.381130245246865 29.184401630752077 21.21254042089609 38 21.16074567958571 28.700544874091015 29.056849875124442 21.08185957119883 39 21.57625643419968 26.746837350513708 29.759331493755397 21.917574721531214 40 23.003617397433647 26.34334890469356 30.705553071494034 19.94748062637876 41 20.355909747045683 27.677578147065773 30.685790372106926 21.28072173378162 42 21.6149583871661 27.818387380198928 29.461655834237067 21.104998398397903 43 21.49358247509694 27.18202845993401 29.187119001917804 22.137270063051247 44 21.910410743003386 26.560079841305523 29.457126882294187 22.072382533396905 45 21.827901473062205 25.69603815518495 29.413237220738647 23.062823151014197 46 21.44326993624059 26.778622358694644 28.975658118475735 22.80244958658903 47 20.701839330900874 27.31081538427334 30.854514418124374 21.132830866701415 48 21.14732351291863 26.74840189754852 30.052148823007734 22.052125766525116 49 21.40366219288559 26.589970924128526 29.911257245293797 22.09510963769208 50 19.649063865633405 26.77829298037152 31.232558388483618 22.340084765511453 51 20.255367013913762 25.38222295783381 30.61958532916011 23.742824699092317 >>END_MODULE >>Per sequence GC content fail #GC Content Count 0 377.0 1 892.5 2 1408.0 3 17915.5 4 34423.0 5 23192.0 6 11961.0 7 11051.5 8 10142.0 9 9958.0 10 9774.0 11 9525.0 12 9276.0 13 8788.5 14 8301.0 15 7889.5 16 7478.0 17 7154.0 18 6830.0 19 6770.5 20 6711.0 21 6800.5 22 6890.0 23 7362.0 24 7834.0 25 8948.0 26 11577.0 27 13092.0 28 14871.5 29 16651.0 30 19861.0 31 23071.0 32 25938.0 33 28805.0 34 32693.5 35 36582.0 36 38467.5 37 40353.0 38 45360.0 39 50367.0 40 52949.0 41 55531.0 42 59394.0 43 63257.0 44 67696.0 45 72135.0 46 81666.5 47 91198.0 48 91753.5 49 92309.0 50 90247.0 51 88185.0 52 82431.0 53 76677.0 54 70656.5 55 64636.0 56 60781.5 57 56927.0 58 54394.5 59 51862.0 60 49032.5 61 46203.0 62 42567.5 63 38932.0 64 33107.5 65 27283.0 66 22464.0 67 17645.0 68 14938.5 69 12232.0 70 10085.5 71 7939.0 72 6323.0 73 4707.0 74 3936.5 75 2395.5 76 1625.0 77 1197.0 78 769.0 79 566.5 80 364.0 81 267.0 82 170.0 83 145.0 84 120.0 85 95.5 86 71.0 87 57.5 88 44.0 89 29.0 90 14.0 91 12.0 92 10.0 93 8.5 94 7.0 95 4.5 96 2.0 97 1.5 98 1.0 99 0.5 100 0.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 44 0.0 45 0.0 46 0.0 47 0.0 48 0.0 49 0.0 50 0.0 51 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 51 1214409.0 >>END_MODULE >>Sequence Duplication Levels fail #Total Deduplicated Percentage 34.36810694851103 #Duplication Level Percentage of deduplicated Percentage of total 1 72.28650002028009 24.843501636305305 2 9.012321128851324 6.194728328213758 3 4.166438169197203 4.295777777799838 4 2.6367398052390456 3.6247902248740664 5 1.7880509921972778 3.072596386461365 6 1.2119765820724075 2.4992004475053213 7 0.9370061139488767 2.2542188434922594 8 0.7386690128660806 2.030932450698602 9 0.6016127029120064 1.8608660743736363 >10 6.529535337446088 43.46966124145303 >50 0.0590260109913529 1.3125021126545438 >100 0.028554777095726062 1.6947504402088964 >500 0.0016656952212165746 0.4151210195520869 >1k 0.0016656952212165746 0.804480982926296 >5k 0.0 0.0 >10k+ 2.3795646017379636E-4 1.6268720334810214 >>END_MODULE >>Overrepresented sequences fail #Sequence Count Percentage Possible Source CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 19893 1.638080745449021 No Hit GAATCTGTCTCTTATACACATCTGACGCACCCGTAATCGTATGCCGTCTTC 1867 0.1537373323155543 No Hit CGTTTCTGTCTCTTATACACATCTGACGCACCCGTAATCGTATGCCGTCTT 1666 0.1371860715788503 No Hit CGTTTTATTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 1530 0.1259872085928217 No Hit GAATGATACCTGTCTCTTATACACATCTGACGCACCCGTAATCGTATGCCG 1275 0.10498934049401809 No Hit GATACTGAAGCTACGAATATACTGACTATGAAGACCTATGCTTTGATTCAT 1263 0.10400120552466262 No Hit GAATGATACGGCTGTCTCTTATACACATCTGACGCACCCGTAATCGTATGC 1222 0.1006250777126981 No Hit >>END_MODULE >>Adapter Content fail #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.05105364008336565 0.0 2 0.0 0.0 0.0 0.22982372495592507 0.0 3 0.0 0.0 0.0 0.3894898670876122 0.0 4 0.0 0.0 0.0 0.6478871615740661 0.0 5 0.0 0.0 0.0 1.2817757444155964 0.0 6 0.0 0.0 0.0 1.9841750184657723 0.0 7 0.0 0.0 0.0 2.4658084714457815 0.0 8 0.0 0.0 0.0 3.1718309070502606 0.0 9 0.0 0.0 0.0 3.5882474520528094 0.0 10 0.0 0.0 0.0 4.229958770068404 0.0 11 0.0 0.0 0.0 4.736707320186198 0.0 12 0.0 0.0 0.0 5.24823185598921 0.0 13 0.0 0.0 0.0 5.476655723071881 0.0 14 0.0 0.0 0.0 5.614994618781646 0.0 15 0.0 0.0 0.0 5.776554686271265 0.0 16 8.234458077962202E-5 0.0 0.0 6.004484485869258 0.0 17 8.234458077962202E-5 0.0 0.0 6.273339542114724 0.0 18 8.234458077962202E-5 0.0 0.0 6.567145006336416 0.0 19 8.234458077962202E-5 0.0 0.0 6.7730064582854705 0.0 20 8.234458077962202E-5 0.0 0.0 6.9803501126885585 0.0 21 8.234458077962202E-5 0.0 0.0 7.231748117808745 0.0 22 8.234458077962202E-5 0.0 0.0 7.508672942970613 0.0 23 8.234458077962202E-5 0.0 0.0 7.781398194512722 0.0 24 8.234458077962202E-5 0.0 0.0 8.009492683272274 0.0 25 1.6468916155924405E-4 0.0 0.0 8.23470511170454 0.0 26 1.6468916155924405E-4 0.0 0.0 8.449048055473897 0.0 27 2.4703374233886607E-4 0.0 0.0 8.663308654662474 0.0 28 2.4703374233886607E-4 0.0 0.0 8.882839307020946 0.0 29 2.4703374233886607E-4 0.0 0.0 9.121803280443409 0.0 30 2.4703374233886607E-4 0.0 0.0 9.427136985974247 0.0 31 2.4703374233886607E-4 0.0 0.0 9.680922983937043 0.0 32 3.293783231184881E-4 0.0 0.0 9.97332859028548 0.0 33 3.293783231184881E-4 0.0 0.0 10.243418815242642 0.0 34 4.117229038981101E-4 0.0 0.0 10.495146198685946 0.0 35 4.117229038981101E-4 0.0 0.0 10.762024984992701 0.0 36 4.940674846777321E-4 0.0 0.0 11.027833291749321 0.0 37 4.940674846777321E-4 0.0 0.0 11.299488063741293 0.0 38 4.940674846777321E-4 0.0 0.0 11.59197601467051 0.0 39 4.940674846777321E-4 0.0 0.0 11.93189444412879 0.0 >>END_MODULE >>Kmer Content fail #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position ATATGCG 35 1.2120108E-7 45.000004 1 CGTATAG 25 3.890937E-5 45.0 2 CGTTTTT 10080 0.0 43.794643 1 CGTTGAT 85 0.0 42.352943 25 CGTGCGG 155 0.0 40.64516 2 TCGTTGA 90 0.0 39.999996 24 CAACGTT 45 1.9284926E-8 39.999996 8 TCGTAAG 45 1.9284926E-8 39.999996 1 CGTTTTA 665 0.0 39.92481 1 GCTACGA 195 0.0 39.23077 10 CGAATAT 190 0.0 39.078945 14 TCGACGT 35 6.2485797E-6 38.57143 26 ACACGAC 245 0.0 37.65306 26 TACCGCG 30 1.13996015E-4 37.499996 25 TACGGGA 295 0.0 37.372883 4 TACGAAT 205 0.0 37.317074 12 AAACACG 250 0.0 36.899998 40 ACGACCA 250 0.0 36.899998 28 ACAACGA 435 0.0 36.72414 13 GTTTTTT 12320 0.0 36.672077 2 >>END_MODULE