##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR2936635.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 857865 Sequences flagged as poor quality 0 Sequence length 51 %GC 43 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 30.979324252650475 31.0 30.0 33.0 28.0 34.0 2 31.05671754879847 31.0 31.0 34.0 28.0 34.0 3 30.63947007979111 31.0 30.0 34.0 27.0 34.0 4 34.595744085607876 35.0 35.0 37.0 32.0 37.0 5 34.93064060195952 35.0 35.0 37.0 32.0 37.0 6 34.88938236202666 35.0 35.0 37.0 32.0 37.0 7 31.08649262995926 35.0 35.0 37.0 0.0 37.0 8 32.86111334533989 35.0 33.0 37.0 17.0 37.0 9 36.05308061291695 38.0 35.0 39.0 32.0 39.0 10 35.96531272403001 37.0 35.0 39.0 32.0 39.0 11 36.2500335134316 37.0 35.0 39.0 32.0 39.0 12 36.42443274874252 38.0 35.0 39.0 32.0 39.0 13 36.377705116772454 38.0 35.0 39.0 32.0 39.0 14 37.5828166436444 39.0 36.0 41.0 32.0 41.0 15 37.58913698542312 39.0 36.0 41.0 32.0 41.0 16 37.60237216811503 39.0 36.0 41.0 32.0 41.0 17 37.35847948103723 39.0 36.0 41.0 32.0 41.0 18 37.10597471630152 39.0 36.0 40.0 32.0 41.0 19 36.828922965734705 38.0 36.0 40.0 31.0 41.0 20 36.57504852162054 38.0 35.0 40.0 31.0 41.0 21 36.70840516864541 38.0 35.0 40.0 31.0 41.0 22 36.78797946063774 38.0 35.0 40.0 31.0 41.0 23 36.88583052111929 38.0 35.0 40.0 32.0 41.0 24 36.70512726361374 38.0 35.0 40.0 31.0 41.0 25 36.46988861883863 38.0 35.0 40.0 31.0 41.0 26 36.35387735832561 38.0 35.0 40.0 31.0 41.0 27 36.44924784202642 38.0 35.0 40.0 31.0 41.0 28 36.39461104019863 38.0 35.0 40.0 31.0 41.0 29 36.28780169373969 38.0 35.0 40.0 30.0 41.0 30 36.01608644716826 38.0 35.0 40.0 30.0 41.0 31 35.9664690831308 38.0 35.0 40.0 30.0 41.0 32 35.552125334405765 38.0 35.0 40.0 27.0 41.0 33 35.12814020854097 38.0 34.0 40.0 25.0 41.0 34 34.87041317689846 38.0 34.0 40.0 23.0 41.0 35 34.64180611168424 38.0 34.0 40.0 21.0 41.0 36 34.49902373916642 38.0 34.0 40.0 20.0 41.0 37 34.373379261305686 38.0 34.0 40.0 18.0 41.0 38 34.150311529203314 38.0 33.0 40.0 18.0 41.0 39 33.839813956741445 38.0 33.0 40.0 16.0 41.0 40 33.564298578447655 38.0 33.0 40.0 15.0 41.0 41 33.367064747949854 38.0 33.0 40.0 15.0 41.0 42 33.44846566767498 38.0 33.0 40.0 15.0 41.0 43 33.36582096250576 38.0 33.0 40.0 15.0 41.0 44 33.20649053172702 37.0 32.0 40.0 14.0 41.0 45 33.181985510540706 37.0 32.0 40.0 15.0 41.0 46 32.948424285872484 37.0 31.0 40.0 13.0 41.0 47 32.80632617020161 37.0 31.0 40.0 13.0 41.0 48 32.76563212160421 37.0 31.0 40.0 12.0 41.0 49 32.669486457659424 37.0 31.0 40.0 12.0 41.0 50 32.559522768734006 36.0 31.0 40.0 12.0 41.0 51 30.92308580021332 35.0 27.0 39.0 9.0 40.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 6 1.0 7 1.0 8 27.0 9 55.0 10 47.0 11 43.0 12 35.0 13 33.0 14 39.0 15 64.0 16 144.0 17 365.0 18 706.0 19 1372.0 20 2433.0 21 3641.0 22 5248.0 23 7782.0 24 11827.0 25 16986.0 26 21832.0 27 23426.0 28 22981.0 29 22904.0 30 24360.0 31 28392.0 32 35012.0 33 44559.0 34 60783.0 35 70742.0 36 79698.0 37 112622.0 38 146485.0 39 113217.0 40 3.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 41.97373712647095 17.2065534786942 19.06512096891702 21.75458842591783 2 37.97019344535562 27.30709377349583 20.596830503634024 14.125882277514526 3 26.291432801198322 27.456767673235298 33.13446754442715 13.117331981139223 4 23.355539624532998 20.845471023995618 39.72874519883665 16.07024415263474 5 25.464029888152567 23.877766315212767 32.718900992580416 17.93930280405425 6 21.676370990773606 32.172428062690514 33.56588740652667 12.585313540009208 7 58.432737085671995 16.054274273924218 21.8997161558054 3.613272484598393 8 66.9628671177866 7.740145594003718 20.549969983622134 4.747017304587551 9 62.055801320720626 5.4596002867584055 20.97964131885553 11.504957073665437 10 33.88761634989188 20.68227518315819 29.75281658536017 15.677291881589762 11 25.9159657988145 23.554405413439177 32.65338951932997 17.87623926841636 12 22.134718166611297 20.645789255885248 37.98791185093226 19.231580726571195 13 20.488305269477134 21.092246449033354 41.32223601615639 17.097212265333123 14 18.424810430545598 25.688773874677253 36.83458353004261 19.051832164734545 15 17.731344675444273 23.86331182645288 41.475057264254865 16.930286233847983 16 20.34970537322306 25.31960156901144 34.51708602169339 19.81360703607211 17 20.274751854895584 24.994142434998516 35.78092124052153 18.950184469584375 18 20.139532443916 25.365412972903663 35.227570771624904 19.26748381155543 19 19.34966457426285 26.42944985516369 33.32867059502369 20.892214975549766 20 21.01496156155106 26.28886829512802 36.282748451096616 16.4134216922243 21 20.93930863247714 26.64533463890006 35.820904221526696 16.594452507096104 22 20.132888041824764 21.519819552027418 36.796815349734516 21.550477056413307 23 20.336999411329288 24.841204618442294 37.00850366899221 17.81329230123621 24 22.204775809713652 23.312875568999782 34.772487512603966 19.709861108682603 25 19.688295944000515 28.450746912392976 32.80003263916817 19.060924504438344 26 19.484883985242433 23.37757106304605 34.641697703018544 22.495847248692975 27 21.844462706836158 24.391133803104218 32.88745898247393 20.876944507585694 28 18.08326484936441 23.94560915761804 35.33994276488725 22.6311832281303 29 20.002098232239337 23.732288879951973 32.730907543727746 23.534705344080944 30 18.983289911582823 26.575976406544154 34.53748550179807 19.903248180074954 31 19.88692859599121 22.856743193859174 32.393674995482975 24.862653214666643 32 20.57713043427579 23.79348732026601 33.24066140942922 22.38872083602898 33 18.95682887167561 22.613814527926888 35.40627021734189 23.023086383055606 34 19.145436636300584 23.023552656886572 37.42710100074021 20.403909706072636 35 18.007262214917265 25.35725318086179 35.217779021174664 21.417705583046285 36 18.83641365482914 25.267029194570238 31.483858182814313 24.412698967786305 37 18.59558322113619 25.791470685947086 33.74878331672233 21.86416277619439 38 19.730610294160503 25.259452244817076 31.24699107668456 23.762946384337862 39 21.884795393214553 23.848857337692994 32.186299709161695 22.080047559930758 40 20.51325091943371 24.353948465084834 35.62308754874019 19.50971306674127 41 18.67892966842102 27.184347187494534 31.953978772883847 22.182744371200595 42 20.080898509672267 25.25374039038776 34.73168855239461 19.93367254754536 43 22.48407383446113 24.417594843011432 29.676114540166576 23.42221678236086 44 21.151230088650312 23.85981477272065 30.942397696607276 24.04655744202176 45 20.484458510371677 23.633905101618552 30.253011837526884 25.628624550482886 46 23.567461080706174 24.94809789419081 30.095644419576505 21.38879660552651 47 19.26643469543576 23.92147948686565 35.74140453334732 21.070681284351267 48 20.20212970572293 24.659008118993082 31.154319152780445 23.98454302250354 49 19.203954002086576 23.160986868563235 35.59709278266394 22.03796634668625 50 19.32332010281338 23.123218688255147 34.83671673281927 22.716744476112208 51 19.406083707809504 22.807201599319242 32.157390731641925 25.629323961229332 >>END_MODULE >>Per sequence GC content fail #GC Content Count 0 169.0 1 482.5 2 796.0 3 16243.0 4 31690.0 5 21477.0 6 11264.0 7 10484.0 8 9704.0 9 9606.0 10 9508.0 11 9168.5 12 8829.0 13 8487.0 14 8145.0 15 7640.0 16 7135.0 17 6714.0 18 6293.0 19 5909.5 20 5526.0 21 5499.0 22 5472.0 23 5540.0 24 5608.0 25 5927.0 26 7066.5 27 7887.0 28 9400.5 29 10914.0 30 12768.5 31 14623.0 32 16482.5 33 18342.0 34 20057.5 35 21773.0 36 23777.0 37 25781.0 38 28812.5 39 31844.0 40 33251.5 41 34659.0 42 37710.0 43 40761.0 44 45217.5 45 49674.0 46 82128.0 47 114582.0 48 89663.5 49 64745.0 50 63339.5 51 61934.0 52 55080.0 53 48226.0 54 44970.5 55 41715.0 56 38946.0 57 36177.0 58 33147.5 59 30118.0 60 28092.0 61 26066.0 62 23563.0 63 21060.0 64 18124.0 65 15188.0 66 12530.0 67 9872.0 68 8094.0 69 6316.0 70 5010.0 71 3704.0 72 3020.0 73 2336.0 74 1964.0 75 1192.5 76 793.0 77 578.5 78 364.0 79 281.5 80 199.0 81 145.5 82 92.0 83 71.5 84 51.0 85 51.0 86 51.0 87 34.0 88 17.0 89 13.0 90 9.0 91 8.5 92 8.0 93 7.0 94 6.0 95 3.0 96 0.0 97 0.5 98 1.0 99 0.5 100 0.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 44 0.0 45 0.0 46 0.0 47 0.0 48 0.0 49 0.0 50 0.0 51 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 51 857865.0 >>END_MODULE >>Sequence Duplication Levels fail #Total Deduplicated Percentage 41.66486052565919 #Duplication Level Percentage of deduplicated Percentage of total 1 73.1436058360406 30.475181355024233 2 9.892248746628903 8.243183286268405 3 4.4870159096803715 5.608526761597394 4 2.608609970783467 4.347494823941482 5 1.7639261219330782 3.6746867923954305 6 1.373496508647957 3.433592427917819 7 1.1226813132814353 3.2743452232844423 8 0.9399449092083358 3.1330138835174965 9 0.8073181727007143 3.027311915886477 >10 3.8034954839911594 22.603209970581638 >50 0.036415092373408835 1.0451623204877318 >100 0.015448679804597482 1.3565283907442802 >500 0.0019310849753190224 0.5102211088051889 >1k 0.002482823539695886 1.9558284269946147 >5k 5.517385643768636E-4 1.7615788946943738 >10k+ 8.276078465652952E-4 5.550134417859013 >>END_MODULE >>Overrepresented sequences fail #Sequence Count Percentage Possible Source GAATCTGTCTCTTATACACATCTGACGCCACCTTTCTCGTATGCCGTCTTC 20301 2.3664562606004442 TruSeq Adapter, Index 27 (95% over 22bp) CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 17816 2.07678364311401 No Hit GAATGATACCTGTCTCTTATACACATCTGACGCCACCTTTCTCGTATGCCG 10170 1.185501215226172 No Hit GAATGATACGGCTGTCTCTTATACACATCTGACGCCACCTTTCTCGTATGC 8702 1.0143787192623548 No Hit GAACTGTCTCTTATACACATCTGACGCCACCTTTCTCGTATGCCGTCTTCT 6624 0.7721494640765155 TruSeq Adapter, Index 27 (100% over 22bp) GCTGTCTCTTATACACATCTGACGCCACCTTTCTCGTATGCCGTCTTCTGC 3475 0.40507539065004394 TruSeq Adapter, Index 27 (96% over 25bp) GAATGCTGTCTCTTATACACATCTGACGCCACCTTTCTCGTATGCCGTCTT 2871 0.33466804217446805 No Hit GAATGACTGTCTCTTATACACATCTGACGCCACCTTTCTCGTATGCCGTCT 2120 0.2471251304109621 No Hit GAATGATCTGTCTCTTATACACATCTGACGCCACCTTTCTCGTATGCCGTC 1906 0.22217948045438388 No Hit CGTTTCTGTCTCTTATACACATCTGACGCCACCTTTCTCGTATGCCGTCTT 1765 0.20574332791290004 TruSeq Adapter, Index 27 (95% over 21bp) CGTTTTATTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 1412 0.16459466233032005 No Hit GAATCTATCTCTTATACACATCTGACGCCACCTTTCTCGTATGCCGTCTTC 1335 0.15561889108426152 TruSeq Adapter, Index 27 (100% over 21bp) CGTTCTGTCTCTTATACACATCTGACGCCACCTTTCTCGTATGCCGTCTTC 1104 0.1286915773460859 TruSeq Adapter, Index 27 (100% over 21bp) CGTTTTCTGTCTCTTATACACATCTGACGCCACCTTTCTCGTATGCCGTCT 1028 0.1198323745577684 No Hit >>END_MODULE >>Adapter Content fail #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 1.1656845774101985E-4 0.0 0.0 0.058983639616956046 0.0 2 1.1656845774101985E-4 0.0 0.0 0.6889195852494273 0.0 3 1.1656845774101985E-4 0.0 0.0 0.9303328612310795 0.0 4 1.1656845774101985E-4 0.0 0.0 2.049506624002611 0.0 5 1.1656845774101985E-4 0.0 0.0 5.331724688616507 0.0 6 1.1656845774101985E-4 0.0 0.0 6.513728850110448 0.0 7 1.1656845774101985E-4 0.0 0.0 7.319566598474119 0.0 8 1.1656845774101985E-4 0.0 0.0 8.182406322673147 0.0 9 1.1656845774101985E-4 0.0 0.0 8.582236132724846 0.0 10 1.1656845774101985E-4 0.0 0.0 10.47659013947416 0.0 11 1.1656845774101985E-4 0.0 0.0 10.927710070931907 0.0 12 1.1656845774101985E-4 0.0 0.0 12.458720194902462 0.0 13 1.1656845774101985E-4 0.0 0.0 12.703980229989567 0.0 14 1.1656845774101985E-4 0.0 0.0 12.869390871524073 0.0 15 1.1656845774101985E-4 0.0 0.0 13.110104736759281 0.0 16 1.1656845774101985E-4 0.0 0.0 13.344057631445507 0.0 17 1.1656845774101985E-4 0.0 0.0 13.579409347624626 0.0 18 1.1656845774101985E-4 0.0 0.0 13.805668724099945 0.0 19 1.1656845774101985E-4 0.0 0.0 14.01537537957604 0.0 20 1.1656845774101985E-4 0.0 0.0 14.193258846088836 0.0 21 1.1656845774101985E-4 0.0 0.0 14.367878395784885 0.0 22 1.1656845774101985E-4 0.0 0.0 14.574670839817454 0.0 23 1.1656845774101985E-4 0.0 0.0 14.770622417280109 0.0 24 1.1656845774101985E-4 0.0 0.0 14.94361000856778 0.0 25 1.1656845774101985E-4 0.0 0.0 15.107738397067138 0.0 26 1.1656845774101985E-4 0.0 0.0 15.270701100989083 0.0 27 1.1656845774101985E-4 0.0 0.0 15.454063285015708 0.0 28 1.1656845774101985E-4 0.0 0.0 15.62576862326823 0.0 29 1.1656845774101985E-4 0.0 0.0 15.809363944210336 0.0 30 1.1656845774101985E-4 0.0 0.0 16.02000314734836 0.0 31 1.1656845774101985E-4 0.0 0.0 16.204880721325615 0.0 32 2.331369154820397E-4 0.0 0.0 16.415170219090417 0.0 33 2.331369154820397E-4 0.0 0.0 16.624993443024252 0.0 34 2.331369154820397E-4 0.0 0.0 16.818380514416603 0.0 35 2.331369154820397E-4 0.0 0.0 17.018411987900194 0.0 36 2.331369154820397E-4 0.0 0.0 17.222873062777943 0.0 37 2.331369154820397E-4 0.0 0.0 17.4304814860147 0.0 38 2.331369154820397E-4 0.0 0.0 17.678888869460813 0.0 39 2.331369154820397E-4 0.0 0.0 17.95737091500411 0.0 >>END_MODULE >>Kmer Content warn #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position CCCCGAT 20 7.0322864E-4 45.0 40 CGTTTTT 9540 0.0 44.103775 1 CGTTTTA 610 0.0 42.786884 1 ACGGGTC 90 0.0 42.5 5 TACGGCT 1075 0.0 41.232555 7 TGATACC 1345 0.0 40.98513 4 GCGATAT 55 6.002665E-11 40.909092 9 GAATCTG 2715 0.0 40.359116 1 ACGGCTG 1175 0.0 39.82979 8 CGCACGG 40 3.456862E-7 39.375 2 ATACGGT 40 3.456862E-7 39.375 28 GATACCT 1420 0.0 38.820423 5 AACCCGC 70 0.0 38.571426 21 ATACGGC 2170 0.0 38.364056 6 AATCTGT 2855 0.0 38.301228 2 GTTTTTT 11150 0.0 38.139015 2 GAATGAT 3955 0.0 37.71808 1 CGGCTGT 1225 0.0 37.653065 9 GTCGACG 30 1.13968075E-4 37.499996 1 ATGATAC 3735 0.0 37.46988 3 >>END_MODULE