##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR2936634.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 919039 Sequences flagged as poor quality 0 Sequence length 51 %GC 45 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 31.122395241115992 31.0 31.0 33.0 28.0 34.0 2 31.18593008566557 31.0 31.0 34.0 28.0 34.0 3 30.875146756557665 31.0 31.0 34.0 27.0 34.0 4 34.84247458486528 35.0 35.0 37.0 32.0 37.0 5 35.117408510411416 35.0 35.0 37.0 33.0 37.0 6 35.097721641845446 36.0 35.0 37.0 32.0 37.0 7 31.029800693985784 35.0 35.0 37.0 0.0 37.0 8 33.03838683668484 35.0 35.0 37.0 17.0 37.0 9 36.36368206354681 39.0 35.0 39.0 32.0 39.0 10 36.113763398506485 37.0 35.0 39.0 32.0 39.0 11 36.39477976451489 38.0 35.0 39.0 32.0 39.0 12 36.5085660129766 38.0 35.0 39.0 32.0 39.0 13 36.48835141925424 39.0 35.0 39.0 32.0 39.0 14 37.551595742944535 39.0 36.0 41.0 32.0 41.0 15 37.69918033946329 40.0 37.0 41.0 33.0 41.0 16 37.658913277891365 39.0 36.0 41.0 33.0 41.0 17 37.5164111642705 39.0 36.0 41.0 32.0 41.0 18 37.40151397274762 39.0 36.0 40.0 32.0 41.0 19 37.15824464467776 39.0 36.0 40.0 32.0 41.0 20 37.06014652261765 39.0 35.0 40.0 32.0 41.0 21 37.08229248160307 39.0 35.0 40.0 32.0 41.0 22 37.184713597573115 39.0 35.0 40.0 32.0 41.0 23 37.235247905692795 39.0 35.0 40.0 32.0 41.0 24 37.140384684436675 39.0 35.0 40.0 32.0 41.0 25 36.8289659089549 39.0 35.0 40.0 31.0 41.0 26 36.81737010072478 39.0 35.0 40.0 31.0 41.0 27 36.86657584716209 39.0 35.0 40.0 31.0 41.0 28 36.842812981821226 39.0 35.0 40.0 31.0 41.0 29 36.80473298739226 39.0 35.0 40.0 31.0 41.0 30 36.54655025521224 39.0 35.0 40.0 31.0 41.0 31 36.48247789266832 39.0 35.0 40.0 30.0 41.0 32 36.257500497802596 39.0 35.0 40.0 30.0 41.0 33 36.018586806435856 39.0 35.0 40.0 29.0 41.0 34 35.85899836677225 39.0 35.0 40.0 28.0 41.0 35 35.708967736951315 39.0 35.0 40.0 27.0 41.0 36 35.62941289760282 39.0 35.0 40.0 27.0 41.0 37 35.5306717125171 38.0 35.0 40.0 26.0 41.0 38 35.39186693927026 38.0 35.0 40.0 25.0 41.0 39 35.33353753213955 38.0 35.0 40.0 25.0 41.0 40 35.23597366379446 38.0 35.0 40.0 24.0 41.0 41 35.07934483737905 38.0 34.0 40.0 24.0 41.0 42 35.093928549278104 38.0 34.0 40.0 24.0 41.0 43 35.062482658516124 38.0 34.0 40.0 24.0 41.0 44 34.88501249674932 38.0 34.0 40.0 23.0 41.0 45 34.781891736912144 38.0 34.0 40.0 23.0 41.0 46 34.723951867113364 38.0 34.0 40.0 23.0 41.0 47 34.65837031943149 38.0 34.0 40.0 23.0 41.0 48 34.596974665928215 38.0 34.0 40.0 23.0 41.0 49 34.5081830042033 38.0 34.0 40.0 23.0 41.0 50 34.372367222718516 37.0 34.0 40.0 23.0 41.0 51 32.88480575905919 36.0 31.0 39.0 18.0 40.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 7 5.0 8 30.0 9 77.0 10 86.0 11 64.0 12 43.0 13 29.0 14 48.0 15 84.0 16 166.0 17 330.0 18 599.0 19 1059.0 20 1807.0 21 2655.0 22 4036.0 23 5703.0 24 8533.0 25 12135.0 26 15150.0 27 16780.0 28 17225.0 29 18427.0 30 20790.0 31 25834.0 32 33202.0 33 44885.0 34 65764.0 35 74452.0 36 89068.0 37 133815.0 38 179697.0 39 146460.0 40 1.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 41.61749392572023 19.94855495795064 22.57455885985252 15.859392256476601 2 36.161577473861286 24.005945340730918 23.785280058844073 16.047197126563724 3 31.32979122757576 23.74687037220401 29.845305803126966 15.07803259709327 4 27.165114864548727 24.517784337770216 30.71033982235792 17.606760975323134 5 25.69401298530313 28.022967469280413 28.63447579482481 17.64854375059165 6 25.023421204105595 33.74144078760531 28.213710190753606 13.021427817535491 7 66.05671794124079 17.479018844684504 13.080076035946245 3.384187178128458 8 77.40454975251322 6.409521249914313 12.628190969044839 3.557738028527625 9 72.05842189504472 6.6866585640000045 14.438560278725928 6.8163592622293505 10 37.60417131373097 24.604505358314498 22.72917689020814 15.062146437746385 11 29.129340539411274 26.471999556058012 27.598502348648967 16.800157555881743 12 25.483793397233413 23.846213272777327 31.757738246146243 18.912255083843014 13 23.381162279293914 24.063179038103932 33.64938811084187 18.906270571760285 14 20.53394904895222 26.249919753133437 33.26964361686501 19.946487581049336 15 20.51360170787094 25.765500702364104 35.53320370517464 18.187693884590317 16 24.260776746144614 25.481073164468537 31.24383187220564 19.01431821718121 17 23.870586558350627 25.698800594969313 31.224028577677338 19.20658426900273 18 24.337922547356534 24.873808402037344 32.10984517523195 18.67842387537417 19 23.380727042051536 26.657410621312046 30.46388673386004 19.49797560277638 20 24.27154886789353 27.072191713300526 30.92491178285143 17.731347635954513 21 24.107899664758513 27.349764264628597 31.615850905130248 16.926485165482642 22 23.266368456616096 23.572993093873055 32.47631493331621 20.684323516194635 23 22.04367823345908 26.007057371885196 33.066496633983974 18.882767760671744 24 21.810935118096186 25.62317812410572 32.38948510346133 20.176401654336757 25 21.800924661521435 27.663352697763642 30.796952033591612 19.73877060712331 26 21.164390194540168 26.15231780152964 30.99683473715479 21.686457266775403 27 21.787867544250027 26.48930023644263 31.07136911491242 20.651463104394917 28 19.871517966049318 26.816272214780874 32.23791373380237 21.074296085367433 29 21.27309069582466 26.03436850884456 31.498663277619336 21.193877517711435 30 21.987967866434396 26.810940558561715 31.464605963403073 19.736485611600813 31 23.005987776362048 26.060047506145008 30.269770923758404 20.66419379373454 32 23.186937659881682 26.846303584505122 29.63780644782213 20.328952307791074 33 21.978175028480837 27.627010388024882 29.097241792785727 21.297572790708553 34 21.826930086753663 27.423101739969685 30.334403654251886 20.415564519024766 35 21.64641544047641 28.734797979193484 28.723264192270403 20.8955223880597 36 22.67760127698607 29.58623083460005 27.788918642190374 19.9472492462235 37 21.481895762856638 29.24533126450564 28.526536958714484 20.746236013923237 38 22.527335619054252 29.234667952067323 27.835053789882693 20.402942638995732 39 22.39067112494682 27.55704600131224 28.20957543695099 21.84270743678995 40 23.719559235244642 27.132145643438417 29.21595275064497 19.932342370671975 41 20.983440311020534 28.681590226312487 28.54362002047791 21.79134944218907 42 22.290240131267552 26.910501077756223 30.035069240804795 20.76418955017143 43 22.081435064235578 27.14313538380852 28.80563284039089 21.969796711565014 44 22.442790784721865 26.444906037719836 29.184942097125365 21.92736108043293 45 21.668068493284835 26.314443674316323 28.80291260762601 23.214575224772833 46 22.582284320904773 26.930630800216314 28.648294577270388 21.83879030160853 47 20.77311191364023 27.07654408572433 31.39518562324341 20.755158377392036 48 21.552404196122254 27.736472554483544 29.090277996907638 21.620845252486564 49 21.46960031075939 26.494958320593575 30.355295041886144 21.680146326760887 50 20.94231039161559 26.76175875017274 30.21873935708931 22.077191501122368 51 20.764515978103216 26.304868454983954 29.30680852499187 23.623807041920962 >>END_MODULE >>Per sequence GC content fail #GC Content Count 0 256.0 1 717.5 2 1179.0 3 10330.0 4 19481.0 5 13164.5 6 6848.0 7 6295.5 8 5743.0 9 5615.5 10 5488.0 11 5375.0 12 5262.0 13 5172.0 14 5082.0 15 4910.5 16 4739.0 17 4623.0 18 4507.0 19 4480.0 20 4453.0 21 4572.5 22 4692.0 23 5008.0 24 5324.0 25 6074.5 26 8361.0 27 9897.0 28 11390.5 29 12884.0 30 15017.0 31 17150.0 32 19579.5 33 22009.0 34 25458.5 35 28908.0 36 31344.5 37 33781.0 38 36241.0 39 38701.0 40 41808.5 41 44916.0 42 47635.0 43 50354.0 44 54593.0 45 58832.0 46 71638.0 47 84444.0 48 78284.5 49 72125.0 50 71205.5 51 70286.0 52 63844.0 53 57402.0 54 53801.5 55 50201.0 56 47134.5 57 44068.0 58 41324.5 59 38581.0 60 34993.0 61 31405.0 62 27475.0 63 23545.0 64 20328.0 65 17111.0 66 14587.5 67 12064.0 68 10202.5 69 8341.0 70 6755.0 71 5169.0 72 4178.5 73 3188.0 74 2539.5 75 1429.5 76 968.0 77 756.0 78 544.0 79 359.0 80 174.0 81 134.5 82 95.0 83 74.5 84 54.0 85 42.5 86 31.0 87 22.5 88 14.0 89 14.0 90 14.0 91 9.0 92 4.0 93 3.5 94 3.0 95 3.5 96 4.0 97 3.0 98 2.0 99 1.0 100 0.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 44 0.0 45 0.0 46 0.0 47 0.0 48 0.0 49 0.0 50 0.0 51 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 51 919039.0 >>END_MODULE >>Sequence Duplication Levels fail #Total Deduplicated Percentage 34.351514870166895 #Duplication Level Percentage of deduplicated Percentage of total 1 72.17642866911574 24.793696627026694 2 9.210779099347368 6.328084303941071 3 4.221641716929433 4.35059364646855 4 2.6115633328430756 3.588446266501661 5 1.725219238478233 2.9631947162441516 6 1.1877696277235137 2.4481011617446127 7 0.8828568985402829 2.1229230314905165 8 0.693245192259195 1.9051218024450756 9 0.5748763214782144 1.7773085255189156 >10 6.643478133061017 43.6583429826099 >50 0.04613365001855482 1.0349862648575985 >100 0.02074457206875506 1.268973103698957 >500 0.0034058252649025954 0.8047146511100285 >1k 0.0012384819145100346 1.2182397057645078 >5k 3.0962047862750865E-4 0.5362637154238388 >10k+ 3.0962047862750865E-4 1.2010094951539045 >>END_MODULE >>Overrepresented sequences fail #Sequence Count Percentage Possible Source CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 11292 1.2286747352397451 No Hit GAATCTGTCTCTTATACACATCTGACGCCAGCAAGATCGTATGCCGTCTTC 5042 0.5486165440204387 No Hit GAATGATACCTGTCTCTTATACACATCTGACGCCAGCAAGATCGTATGCCG 4332 0.4713619334979256 No Hit GAATGATACGGCTGTCTCTTATACACATCTGACGCCAGCAAGATCGTATGC 4311 0.4690769379754287 No Hit GCTGTCTCTTATACACATCTGACGCCAGCAAGATCGTATGCCGTCTTCTGC 1465 0.1594056400218054 Illumina Single End Adapter 1 (95% over 21bp) GAACTGTCTCTTATACACATCTGACGCCAGCAAGATCGTATGCCGTCTTCT 1346 0.1464573320609898 No Hit CGTTTCTGTCTCTTATACACATCTGACGCCAGCAAGATCGTATGCCGTCTT 935 0.10173670540640821 No Hit >>END_MODULE >>Adapter Content fail #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 3.26427931785267E-4 0.0 0.0 0.05745131599420699 0.0 2 3.26427931785267E-4 0.0 0.0 0.33393577421632814 0.0 3 3.26427931785267E-4 0.0 0.0 0.4993259263208634 0.0 4 3.26427931785267E-4 0.0 0.0 0.8112822197969836 0.0 5 3.26427931785267E-4 0.0 0.0 1.781099605131012 0.0 6 3.26427931785267E-4 0.0 0.0 2.3120890408350463 0.0 7 3.26427931785267E-4 0.0 0.0 2.7292639376566172 0.0 8 3.26427931785267E-4 0.0 0.0 3.3103056562343927 0.0 9 3.26427931785267E-4 0.0 0.0 3.5903808217061517 0.0 10 3.26427931785267E-4 0.0 0.0 4.550514178397217 0.0 11 3.26427931785267E-4 0.0 0.0 5.013388985668725 0.0 12 3.26427931785267E-4 0.0 0.0 5.896485350458468 0.0 13 3.26427931785267E-4 0.0 0.0 6.095062342294505 0.0 14 3.26427931785267E-4 0.0 0.0 6.217908053956361 0.0 15 3.26427931785267E-4 0.0 0.0 6.410282915088478 0.0 16 3.26427931785267E-4 0.0 0.0 6.6487929239129135 0.0 17 3.26427931785267E-4 0.0 0.0 6.914178832454335 0.0 18 3.26427931785267E-4 0.0 0.0 7.211554678310714 0.0 19 3.26427931785267E-4 0.0 0.0 7.413504758775199 0.0 20 3.26427931785267E-4 0.0 0.0 7.6158900764820645 0.0 21 3.26427931785267E-4 0.0 0.0 7.836120121126524 0.0 22 3.26427931785267E-4 0.0 0.0 8.086490344805824 0.0 23 3.26427931785267E-4 0.0 0.0 8.327285349152756 0.0 24 3.26427931785267E-4 0.0 0.0 8.537396127911872 0.0 25 3.26427931785267E-4 0.0 0.0 8.729444561112205 0.0 26 3.26427931785267E-4 0.0 0.0 8.914964435676833 0.0 27 3.26427931785267E-4 0.0 0.0 9.120722842012146 0.0 28 3.26427931785267E-4 0.0 0.0 9.305045814160225 0.0 29 3.26427931785267E-4 0.0 0.0 9.528322519501348 0.0 30 3.26427931785267E-4 0.0 0.0 9.802848410132759 0.0 31 3.26427931785267E-4 0.0 0.0 10.035047478942678 0.0 32 3.26427931785267E-4 0.0 0.0 10.271272492244616 0.0 33 3.26427931785267E-4 0.0 0.0 10.498357523456567 0.0 34 3.26427931785267E-4 0.0 0.0 10.735670629864456 0.0 35 3.26427931785267E-4 0.0 0.0 10.980709197324597 0.0 36 3.26427931785267E-4 0.0 0.0 11.212255410270947 0.0 37 3.26427931785267E-4 0.0 0.0 11.466107531889289 0.0 38 3.26427931785267E-4 0.0 0.0 11.739980566657128 0.0 39 3.26427931785267E-4 0.0 0.0 12.12919147065576 0.0 >>END_MODULE >>Kmer Content warn #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position CCTCACG 20 7.0325466E-4 45.000004 42 TTACCCG 20 7.0325466E-4 45.000004 12 CGTTTTT 5600 0.0 43.433037 1 CGAATAT 95 0.0 42.63158 14 CGCACGG 55 6.002665E-11 40.909092 2 AATAGCG 50 1.0804797E-9 40.500004 1 GACCGAT 340 0.0 39.705883 9 CGTTTTA 370 0.0 38.918922 1 ACGGGTA 105 0.0 38.57143 5 GTATGCG 35 6.2469226E-6 38.571426 1 TATCCGG 35 6.2469226E-6 38.571426 2 TACGGCT 480 0.0 38.437496 7 CACGACC 230 0.0 38.152172 27 TACGGGT 95 0.0 37.894737 4 TCTAGCG 30 1.139744E-4 37.499996 1 AGTTGCG 30 1.139744E-4 37.499996 1 GCGTACG 30 1.139744E-4 37.499996 1 CACGTGA 230 0.0 37.173912 43 TCAAGCG 255 0.0 37.058823 17 AGCGACT 225 0.0 37.0 19 >>END_MODULE