##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR2936633.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 324980 Sequences flagged as poor quality 0 Sequence length 51 %GC 45 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 31.217428764847067 31.0 31.0 33.0 28.0 34.0 2 31.241753338666996 31.0 31.0 34.0 28.0 34.0 3 30.99113483906702 31.0 31.0 34.0 28.0 34.0 4 34.94631361929965 35.0 35.0 37.0 32.0 37.0 5 35.22561388393132 35.0 35.0 37.0 33.0 37.0 6 35.22196135146778 36.0 35.0 37.0 33.0 37.0 7 30.649729214105484 35.0 35.0 37.0 0.0 37.0 8 32.88816234845221 36.0 35.0 37.0 17.0 37.0 9 36.22037356144993 39.0 35.0 39.0 32.0 39.0 10 36.19211951504708 37.0 35.0 39.0 32.0 39.0 11 36.49015016308696 38.0 35.0 39.0 32.0 39.0 12 36.54403347898332 38.0 35.0 39.0 32.0 39.0 13 36.428161733029725 39.0 35.0 39.0 32.0 39.0 14 37.49523662994646 39.0 36.0 41.0 32.0 41.0 15 37.72703858698997 39.0 36.0 41.0 33.0 41.0 16 37.64129177180134 39.0 36.0 41.0 33.0 41.0 17 37.55460643731922 39.0 36.0 41.0 33.0 41.0 18 37.458511293002644 39.0 36.0 40.0 33.0 41.0 19 37.19015016308696 39.0 36.0 40.0 32.0 41.0 20 37.11361929964921 39.0 35.0 40.0 32.0 41.0 21 37.11317619545818 39.0 35.0 40.0 32.0 41.0 22 37.163803926395474 39.0 35.0 40.0 32.0 41.0 23 37.22009662133054 39.0 35.0 40.0 32.0 41.0 24 37.16867191827189 39.0 35.0 40.0 32.0 41.0 25 36.84484275955443 39.0 35.0 40.0 31.0 41.0 26 36.794750446181304 39.0 35.0 40.0 31.0 41.0 27 36.81036986891501 39.0 35.0 40.0 31.0 41.0 28 36.78008800541572 39.0 35.0 40.0 31.0 41.0 29 36.74956612714629 39.0 35.0 40.0 31.0 41.0 30 36.54173179887993 38.0 35.0 40.0 31.0 41.0 31 36.454997230598806 38.0 35.0 40.0 30.0 41.0 32 36.24380577266293 38.0 35.0 40.0 30.0 41.0 33 36.070373561449934 38.0 35.0 40.0 30.0 41.0 34 35.91110529878762 38.0 35.0 40.0 29.0 41.0 35 35.81518554987999 38.0 35.0 40.0 29.0 41.0 36 35.6855160317558 38.0 35.0 40.0 28.0 41.0 37 35.529863376207764 38.0 35.0 40.0 27.0 41.0 38 35.40708966705643 38.0 35.0 40.0 26.0 41.0 39 35.39444888916241 38.0 35.0 40.0 26.0 41.0 40 35.23832235829897 38.0 34.0 40.0 25.0 41.0 41 35.09471967505693 38.0 34.0 40.0 24.0 41.0 42 35.07413686996123 38.0 34.0 40.0 24.0 41.0 43 35.008738999323036 38.0 34.0 40.0 24.0 41.0 44 34.818142654932615 38.0 34.0 40.0 24.0 41.0 45 34.75032309680596 38.0 34.0 40.0 23.0 41.0 46 34.661308388208504 38.0 34.0 40.0 23.0 41.0 47 34.575284632900484 37.0 34.0 40.0 23.0 41.0 48 34.48816542556465 37.0 34.0 40.0 23.0 41.0 49 34.36119453504831 37.0 33.0 40.0 23.0 41.0 50 34.19559665210167 37.0 33.0 40.0 23.0 41.0 51 32.47997415225552 35.0 31.0 39.0 18.0 40.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 7 1.0 8 11.0 9 21.0 10 18.0 11 22.0 12 10.0 13 16.0 14 6.0 15 30.0 16 41.0 17 80.0 18 177.0 19 320.0 20 547.0 21 776.0 22 1324.0 23 1869.0 24 2809.0 25 3854.0 26 5208.0 27 5876.0 28 5841.0 29 6491.0 30 7501.0 31 9289.0 32 12179.0 33 16737.0 34 25951.0 35 29077.0 36 31444.0 37 46615.0 38 61901.0 39 48937.0 40 1.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 40.36279155640347 19.716597944488893 23.233429749523047 16.68718074958459 2 35.09815988676227 25.024616899501506 23.600529263339283 16.276693950396947 3 32.063203889470124 23.266354852606312 29.78121730568035 14.889223952243217 4 30.064619361191458 24.072250600036927 28.210659117484155 17.652470921287463 5 26.074835374484586 28.52606314234722 26.41731798879931 18.981783494368884 6 25.061234537510003 34.0457874330728 26.73579912610007 14.157178903317128 7 64.11533017416457 19.4310419102714 12.652470921287465 3.8011569942765706 8 74.34088251584713 7.597698319896609 13.039263954704905 5.022155209551357 9 67.36229921841344 9.290417871869037 15.598498369130409 7.7487845405871125 10 38.808234352883254 25.563111576096993 22.590313250046158 13.038340820973598 11 30.339097790633268 24.87660779124869 27.332451227767862 17.451843190350175 12 29.40180934211336 22.302603237122284 31.162225367714935 17.13336205304942 13 23.442981106529633 26.178534063634686 31.691796418241125 18.68668841159456 14 18.689150101544712 29.532278909471355 31.247153670995136 20.531417317988797 15 18.45959751369315 25.748661456089607 36.81826573943012 18.973475290787125 16 20.24309188257739 25.65419410425257 33.730998830697274 20.37171518247277 17 20.352329374115328 25.352944796602866 31.112376146224385 23.182349683057417 18 22.301987814634746 25.76589328574066 31.74256877346298 20.18955012616161 19 24.294725829281802 25.716967197981415 29.269493507292754 20.71881346544403 20 24.691981044987386 24.950458489753217 31.57517385685273 18.78238660840667 21 23.559603667918026 26.79426426241615 31.26223152193981 18.383900547726014 22 22.1404394116561 24.630746507477383 30.356329620284324 22.87248446058219 23 21.057911256077297 27.163517754938766 30.92559542125669 20.852975567727245 24 22.02258600529263 23.650993907317375 32.581697335220625 21.744722752169366 25 20.497569081174227 27.885100621576715 30.193858083574376 21.42347221367469 26 19.706135762200752 28.50267708782079 29.364268570373564 22.426918579604898 27 21.2228444827374 28.28912548464521 30.058157425072313 20.42987260754508 28 18.364514739368577 27.106898886085297 34.37042279524894 20.158163579297188 29 20.132931257308144 26.477629392578006 32.67124130715736 20.71819804295649 30 21.6742568773463 27.197981414240875 31.33946704412579 19.788294664287033 31 23.30266477937104 26.010831435780663 30.290171702874026 20.396332081974275 32 23.0906517324143 26.98135269862761 30.500030771124376 19.427964797833713 33 23.32451227767863 26.78564834759062 29.247646008985168 20.642193365745584 34 20.910825281555788 27.339836297618312 31.297926026217 20.451412394608898 35 23.08880546495169 25.428641762570003 29.512585389870143 21.96996738260816 36 24.29749523047572 27.670010462182287 28.603914087020737 19.42858022032125 37 22.593082651240078 28.06018831928119 30.880054157178904 18.466674872299834 38 21.621330543418058 27.53400209243646 29.574435349867684 21.270232014277802 39 22.87740784048249 25.132315834820606 31.236999199950766 20.753277124746138 40 24.793833466674872 24.815680964982462 30.665887131515785 19.72459843682688 41 20.685272939873222 26.833343590374792 30.07662009969844 22.404763370053544 42 22.999569204258723 25.37294602744784 29.93291894885839 21.69456581943504 43 24.048864545510494 24.898147578312514 29.707366607175828 21.34562126900117 44 22.38691611791495 25.45356637331528 29.53350975444643 22.626007754323343 45 20.902824789217796 26.844728906394238 28.387593082651243 23.864853221736723 46 23.351590867130284 26.90319404271032 28.792541079451045 20.952674010708353 47 22.347221367468766 25.18893470367407 32.09982152747861 20.364022401378545 48 22.46384392885716 24.96522862945412 30.768970398178347 21.80195704351037 49 21.795495107391226 24.085174472275217 31.955197242907257 22.164133177426304 50 20.29386423779925 25.09262108437442 31.630869591974893 22.982645085851434 51 20.24832297372146 25.588959320573572 29.507969721213613 24.654747984491355 >>END_MODULE >>Per sequence GC content fail #GC Content Count 0 158.0 1 480.5 2 803.0 3 3397.5 4 5992.0 5 4212.5 6 2433.0 7 2232.0 8 2031.0 9 1948.5 10 1866.0 11 1789.5 12 1713.0 13 1714.5 14 1716.0 15 1583.5 16 1451.0 17 1416.5 18 1382.0 19 1362.5 20 1343.0 21 1531.0 22 1719.0 23 1844.5 24 1970.0 25 2280.5 26 2805.5 27 3020.0 28 4072.0 29 5124.0 30 5636.0 31 6148.0 32 7059.0 33 7970.0 34 8961.0 35 9952.0 36 10025.5 37 10099.0 38 11003.5 39 11908.0 40 13655.0 41 15402.0 42 17935.0 43 20468.0 44 21541.5 45 22615.0 46 26347.0 47 30079.0 48 29793.0 49 29507.0 50 27838.5 51 26170.0 52 23126.0 53 20082.0 54 17745.0 55 15408.0 56 14162.5 57 12917.0 58 12442.5 59 11968.0 60 11449.0 61 10930.0 62 10030.5 63 9131.0 64 7879.0 65 6627.0 66 5407.5 67 4188.0 68 3677.0 69 3166.0 70 2501.0 71 1836.0 72 1490.0 73 1144.0 74 989.0 75 639.0 76 444.0 77 367.5 78 291.0 79 236.0 80 181.0 81 142.5 82 104.0 83 74.5 84 45.0 85 36.5 86 28.0 87 19.5 88 11.0 89 8.5 90 6.0 91 7.0 92 8.0 93 4.5 94 1.0 95 0.5 96 0.0 97 0.0 98 0.0 99 0.0 100 0.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 44 0.0 45 0.0 46 0.0 47 0.0 48 0.0 49 0.0 50 0.0 51 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 51 324980.0 >>END_MODULE >>Sequence Duplication Levels fail #Total Deduplicated Percentage 31.900348036707577 #Duplication Level Percentage of deduplicated Percentage of total 1 73.34517331654597 23.39736555610454 2 9.387459617541182 5.98926457960203 3 3.8112554843191147 3.6474112921977073 4 2.1748583783000113 2.7751495679327913 5 1.4804609940672024 2.3613610482756915 6 1.1040668448114486 2.1132069963164897 7 0.8275470649430889 1.847932757190827 8 0.6378796620838791 1.6278866580810532 9 0.5480374100928865 1.5734325707189027 >10 6.46564346069744 45.979832532246554 >50 0.16570894153777702 3.3051318440102486 >100 0.04392285197386861 2.4835459342360466 >500 0.004991233178848706 1.1664609253887215 >1k 0.002994739907309223 1.7320177376984047 >5k 0.0 0.0 >10k+ 0.0 0.0 >>END_MODULE >>Overrepresented sequences fail #Sequence Count Percentage Possible Source CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 3400 1.0462182288140809 No Hit GAATGATACCTGTCTCTTATACACATCTGACGCAGTTGTGGTCGTATGCCG 1028 0.316327158594375 No Hit GAATGATACGGCTGTCTCTTATACACATCTGACGCAGTTGTGGTCGTATGC 1011 0.3110960674503046 No Hit GCTGTCTCTTATACACATCTGACGCAGTTGTGGTCGTATGCCGTCTTCTGC 939 0.28894085789894763 No Hit GAATCTGTCTCTTATACACATCTGACGCAGTTGTGGTCGTATGCCGTCTTC 809 0.2489383962089975 No Hit CCTGTCTCTTATACACATCTGACGCAGTTGTGGTCGTATGCCGTCTTCTGC 724 0.22278294048864544 No Hit GATACTGAAGCTACGAATATACTGACTATGAAGACCTATGCTTTGATTCAT 649 0.1997045972059819 No Hit TATGAAAACTATGCCCTCGTGTACTCCTGCACCACCTTCTTCTGGCTCTTC 542 0.16677949412271525 No Hit CTGTCTCTTATACACATCTGACGCAGTTGTGGTCGTATGCCGTCTTCTGCT 471 0.14493199581512708 Illumina Single End Adapter 2 (95% over 21bp) AAGGAAGGAAGGAAGGAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAG 464 0.14277801710874516 No Hit GCACAAGAGTGAGGAGAGCTAAAAGGACATGTAAGAAACCAATCAAGATCA 391 0.12031509631361931 No Hit >>END_MODULE >>Adapter Content fail #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.16616407163517755 0.0 2 0.0 0.0 0.0 0.9139023939934765 0.0 3 0.0 0.0 0.0 1.160686811496092 0.0 4 0.0 0.0 0.0 1.5096313619299648 0.0 5 0.0 0.0 0.0 2.569696596713644 0.0 6 0.0 0.0 0.0 3.049110714505508 0.0 7 0.0 0.0 0.0 3.544218105729583 0.0 8 0.0 0.0 0.0 4.33534371345929 0.0 9 0.0 0.0 0.0 4.59412886946889 0.0 10 0.0 0.0 0.0 5.572650624653825 0.0 11 0.0 0.0 0.0 6.490860976060065 0.0 12 0.0 0.0 0.0 7.624776909348268 0.0 13 0.0 0.0 0.0 8.026340082466612 0.0 14 0.0 0.0 0.0 8.238660840667118 0.0 15 0.0 0.0 0.0 8.556526555480337 0.0 16 0.0 0.0 0.0 9.16702566311773 0.0 17 0.0 0.0 0.0 9.79721829035633 0.0 18 0.0 0.0 0.0 10.522185980675735 0.0 19 0.0 0.0 0.0 10.944058095882824 0.0 20 0.0 0.0 0.0 11.357006585020617 0.0 21 0.0 0.0 0.0 11.855806511169918 0.0 22 0.0 0.0 0.0 12.383223582989723 0.0 23 0.0 0.0 0.0 12.882331220382794 0.0 24 0.0 0.0 0.0 13.279894147332143 0.0 25 0.0 0.0 0.0 13.672841405624961 0.0 26 0.0 0.0 0.0 13.998399901532402 0.0 27 0.0 0.0 0.0 14.3510369868915 0.0 28 0.0 0.0 0.0 14.715059388270047 0.0 29 0.0 0.0 0.0 15.078158655917287 0.0 30 0.0 0.0 0.0 15.502492461074528 0.0 31 0.0 0.0 0.0 15.880361868422671 0.0 32 0.0 0.0 0.0 16.287156132685087 0.0 33 0.0 0.0 0.0 16.655178780232628 0.0 34 0.0 0.0 0.0 17.026893962705397 0.0 35 0.0 0.0 0.0 17.411533017416456 0.0 36 0.0 0.0 0.0 17.8081728106345 0.0 37 0.0 0.0 0.0 18.161733029724907 0.0 38 0.0 0.0 0.0 18.514985537571544 0.0 39 0.0 0.0 0.0 18.87069973536833 0.0 >>END_MODULE >>Kmer Content warn #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position CACGACC 25 3.8846094E-5 45.000004 27 GCCTCGA 25 3.8846094E-5 45.000004 14 CTCGATC 25 3.8846094E-5 45.000004 16 TAGATCA 25 3.8846094E-5 45.000004 31 GAACCCG 25 3.8846094E-5 45.000004 1 TCGGTAC 25 3.8846094E-5 45.000004 22 CGGGTAA 20 7.02581E-4 45.0 28 CCCTCGT 85 0.0 45.0 14 ATCTAGA 20 7.02581E-4 45.0 21 TTGTCGG 20 7.02581E-4 45.0 29 GGCCGAT 45 3.8380676E-10 45.0 8 TCGATAG 20 7.02581E-4 45.0 1 TTATCCG 20 7.02581E-4 45.0 1 TCTACAC 20 7.02581E-4 45.0 17 CTACGAA 75 0.0 45.0 11 ATTGGCG 20 7.02581E-4 45.0 20 GCTACGA 75 0.0 45.0 10 TATACGG 35 1.2083365E-7 45.0 2 ACTCACG 20 7.02581E-4 45.0 24 CGAAGGC 20 7.02581E-4 45.0 4 >>END_MODULE