##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR2936632.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 917702 Sequences flagged as poor quality 0 Sequence length 51 %GC 44 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 31.11949303804503 31.0 31.0 33.0 28.0 34.0 2 31.216723947425198 31.0 31.0 34.0 28.0 34.0 3 30.826038300014602 31.0 30.0 34.0 27.0 34.0 4 34.7725950254004 35.0 35.0 37.0 32.0 37.0 5 35.11121039291622 35.0 35.0 37.0 33.0 37.0 6 35.117170933483855 36.0 35.0 37.0 32.0 37.0 7 31.170775480493667 35.0 35.0 37.0 0.0 37.0 8 33.14480626608638 36.0 35.0 37.0 17.0 37.0 9 36.43419105548424 39.0 35.0 39.0 32.0 39.0 10 36.24110332112167 37.0 35.0 39.0 32.0 39.0 11 36.49885583773382 38.0 35.0 39.0 32.0 39.0 12 36.60377551754273 39.0 35.0 39.0 32.0 39.0 13 36.60787597716906 39.0 35.0 39.0 32.0 39.0 14 37.677178430470896 40.0 37.0 41.0 33.0 41.0 15 37.83326068811008 40.0 37.0 41.0 33.0 41.0 16 37.7589162930886 40.0 37.0 41.0 33.0 41.0 17 37.64210931217323 39.0 36.0 41.0 33.0 41.0 18 37.469942312428216 39.0 36.0 40.0 32.0 41.0 19 37.16932293925479 39.0 36.0 40.0 32.0 41.0 20 37.02627868305834 39.0 35.0 40.0 32.0 41.0 21 37.01015907124535 39.0 35.0 40.0 32.0 41.0 22 37.07954325042334 39.0 35.0 40.0 32.0 41.0 23 37.13209407846992 39.0 35.0 40.0 32.0 41.0 24 37.04813545137746 39.0 35.0 40.0 32.0 41.0 25 36.70065446081625 38.0 35.0 40.0 31.0 41.0 26 36.696520221161116 38.0 35.0 40.0 31.0 41.0 27 36.72103144593779 38.0 35.0 40.0 31.0 41.0 28 36.68868979254704 38.0 35.0 40.0 31.0 41.0 29 36.64037345456368 39.0 35.0 40.0 31.0 41.0 30 36.33794630500969 38.0 35.0 40.0 30.0 41.0 31 36.21497501367546 38.0 35.0 40.0 30.0 41.0 32 35.90415080276604 38.0 35.0 40.0 29.0 41.0 33 35.56673844014724 38.0 35.0 40.0 27.0 41.0 34 35.29253613918244 38.0 35.0 40.0 25.0 41.0 35 35.101479565261926 38.0 34.0 40.0 23.0 41.0 36 34.97375509697048 38.0 34.0 40.0 23.0 41.0 37 34.876499124988285 38.0 34.0 40.0 23.0 41.0 38 34.7298349573173 38.0 34.0 40.0 22.0 41.0 39 34.62956493502248 38.0 34.0 40.0 21.0 41.0 40 34.49157569668585 38.0 34.0 40.0 21.0 41.0 41 34.29534424028715 38.0 33.0 40.0 19.0 41.0 42 34.30078609396079 38.0 34.0 40.0 19.0 41.0 43 34.25052468012492 38.0 33.0 40.0 19.0 41.0 44 34.033553375714554 38.0 33.0 40.0 18.0 41.0 45 33.92991733700046 38.0 33.0 40.0 18.0 41.0 46 33.83737640323329 37.0 33.0 40.0 18.0 41.0 47 33.75676853706323 37.0 33.0 40.0 18.0 41.0 48 33.68435178304068 37.0 33.0 40.0 18.0 41.0 49 33.59433781336425 37.0 33.0 40.0 18.0 41.0 50 33.45700456139357 37.0 33.0 40.0 18.0 41.0 51 31.934481999603356 35.0 30.0 39.0 13.0 40.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 7 7.0 8 45.0 9 74.0 10 86.0 11 92.0 12 48.0 13 43.0 14 57.0 15 107.0 16 196.0 17 356.0 18 652.0 19 1251.0 20 1987.0 21 3062.0 22 4653.0 23 6965.0 24 10791.0 25 15257.0 26 19986.0 27 21082.0 28 20533.0 29 20193.0 30 21816.0 31 26389.0 32 33125.0 33 44576.0 34 63961.0 35 74228.0 36 86304.0 37 128832.0 38 170780.0 39 140157.0 40 11.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 39.83515345940186 19.64602888519367 21.34145942800604 19.177358227398436 2 39.931807928935534 21.957018727212102 22.36553914015661 15.745634203695753 3 30.623884441790473 22.096715491521213 32.41313629042979 14.866263776258522 4 26.481145295531665 23.217231737535716 32.425122752265985 17.876500214666635 5 23.859924027625524 26.900344556293877 31.22920076451833 18.010530651562274 6 24.345811603330926 31.630856203865743 31.196837317560604 12.826494875242725 7 63.75664431373147 16.808506465061644 15.892195941601958 3.5426532796049264 8 74.70268126254493 5.385735238672249 16.168756306513444 3.742827192269386 9 68.72655829452262 6.8333729249800035 18.06185450178816 6.37821427870921 10 36.37967444769653 24.75683827647755 25.20524091698612 13.658246358839799 11 26.627924969107617 24.302115501546254 32.12044868595688 16.94951084338925 12 23.96050133921469 22.456636250111693 35.418033304929054 18.164829105744566 13 22.633164142608383 22.57519325445515 36.86501718422756 17.926625418708905 14 19.301472591320493 24.685573312469625 36.193230482226255 19.819723613983626 15 18.469394204218798 24.88683690348283 37.9341006121813 18.709668280117075 16 22.65168867453705 25.561129865686244 34.07620338628444 17.710978073492267 17 22.77460439227549 24.628692102665134 33.66746503767018 18.929238467389194 18 23.243384017905594 24.015856999330936 34.34993058748918 18.390828395274283 19 21.92302076273126 26.224090173062713 32.60361206579042 19.249276998415606 20 22.994283547382484 25.637516317933272 33.67367620425803 17.694523930426218 21 22.94285072932172 25.76468178123182 34.35810317510477 16.934364314341693 22 22.578680225171134 22.795308280901644 34.6413105779436 19.98470091598362 23 20.760660868124948 24.643729663877817 35.599682685664845 18.995926782332393 24 21.02044018646576 24.379809567811773 35.045472277493126 19.55427796822934 25 21.097371477887158 26.65821802720273 33.09483906540468 19.14957142950544 26 20.831380992958497 25.7574899041301 32.63891764428976 20.772211458621644 27 20.624995913706194 25.28119149789365 33.732409867255384 20.36140272114477 28 19.328278678699622 26.141492554227842 34.029347217288404 20.500881549784133 29 20.370664987109105 26.70267690383153 33.12349760597667 19.8031605030827 30 21.141067579671834 25.948510518665103 33.76324776452487 19.1471741371382 31 22.73886294243665 25.660726466761542 32.449313611608126 19.15109697919368 32 22.642644344242466 26.517431584544877 31.869822665745524 18.970101405467137 33 21.76817746937459 26.312027215806438 31.704082588901407 20.215712725917566 34 21.485296970040384 26.533340888436552 33.03305430303083 18.948307838492234 35 21.53367868872466 28.073710202222507 31.11151550285387 19.28109560619896 36 22.665745525235863 28.158269242085122 29.520258210181517 19.655727022497498 37 21.482136902829023 28.207304767778645 30.28543034667027 20.02512798272206 38 22.200561838156613 27.447363087363875 30.313326112398144 20.038748962081375 39 22.210368943295318 26.59000416257129 29.98162802304016 21.21799887109323 40 23.74888580388841 25.5933843448091 31.19629247838623 19.46143737291626 41 20.748238534949255 26.44899978424369 30.732852276664975 22.069909404142084 42 21.33633793976694 26.742995002735093 30.891618412077122 21.029048645420843 43 21.752813004657284 26.320090835587152 30.184635099411356 21.742461060344205 44 21.94437845836666 26.000161272395616 30.347433044713863 21.708027224523864 45 21.167328827876588 25.96954131079588 29.897722790186794 22.96540707114074 46 21.449555520201546 27.017484978783962 29.707029079156417 21.825930421858075 47 20.4920551551593 26.6929787665277 31.68261592543113 21.132350152881873 48 20.659647685196283 26.94186130138106 31.369442368001817 21.029048645420843 49 21.11338974961371 26.07600288546827 31.35211648225677 21.458490882661255 50 19.7698163456111 26.801728665732448 32.14463954529902 21.28381544335743 51 19.751182845847563 25.892501051539607 30.967677960819522 23.388638141793304 >>END_MODULE >>Per sequence GC content fail #GC Content Count 0 301.0 1 798.5 2 1296.0 3 15341.0 4 29386.0 5 19769.0 6 10152.0 7 9440.5 8 8729.0 9 8542.5 10 8356.0 11 8151.5 12 7947.0 13 7548.5 14 7150.0 15 6821.5 16 6493.0 17 6191.0 18 5889.0 19 5543.5 20 5198.0 21 5329.0 22 5460.0 23 5609.0 24 5758.0 25 6525.0 26 8710.5 27 10129.0 28 11387.5 29 12646.0 30 14524.5 31 16403.0 32 19281.0 33 22159.0 34 25779.5 35 29400.0 36 31327.5 37 33255.0 38 35767.0 39 38279.0 40 41382.0 41 44485.0 42 46003.5 43 47522.0 44 50998.5 45 54475.0 46 64645.5 47 74816.0 48 72018.0 49 69220.0 50 67357.0 51 65494.0 52 61278.5 53 57063.0 54 52641.5 55 48220.0 56 44966.5 57 41713.0 58 39140.5 59 36568.0 60 33291.5 61 30015.0 62 26986.0 63 23957.0 64 20752.0 65 17547.0 66 14903.0 67 12259.0 68 10520.0 69 8781.0 70 7412.0 71 6043.0 72 4747.5 73 3452.0 74 2736.5 75 1604.5 76 1188.0 77 891.5 78 595.0 79 460.0 80 325.0 81 228.5 82 132.0 83 92.5 84 53.0 85 46.5 86 40.0 87 28.0 88 16.0 89 13.5 90 11.0 91 9.0 92 7.0 93 5.5 94 4.0 95 2.5 96 1.0 97 1.0 98 1.0 99 0.5 100 0.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 44 0.0 45 0.0 46 0.0 47 0.0 48 0.0 49 0.0 50 0.0 51 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 51 917702.0 >>END_MODULE >>Sequence Duplication Levels fail #Total Deduplicated Percentage 38.02581791263051 #Duplication Level Percentage of deduplicated Percentage of total 1 73.43858061810118 27.925620943459517 2 8.983015434635764 6.8317301844761795 3 4.248993068635485 4.847143102198863 4 2.4921185129368633 3.7905937915853074 5 1.6400948824401056 3.11829746795523 6 1.1082301237617225 2.528481413487314 7 0.8870237287508711 2.361086195556423 8 0.7255338054425966 2.2071213100174454 9 0.6284353496575256 2.150709135834362 >10 5.785642559997463 38.24762827522127 >50 0.04005052749367804 1.0130842624534417 >100 0.018332787716148224 1.3830845869797537 >500 0.0016922573273550315 0.4103351139346327 >1k 0.001974300215247537 1.317233630252263 >5k 0.0 0.0 >10k+ 2.8204288789250527E-4 1.867850586587967 >>END_MODULE >>Overrepresented sequences fail #Sequence Count Percentage Possible Source CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 17416 1.8977838121743225 No Hit GAATCTGTCTCTTATACACATCTGACGCAAGATGGCTCGTATGCCGTCTTC 3567 0.3886882669973477 No Hit GAATGATACCTGTCTCTTATACACATCTGACGCAAGATGGCTCGTATGCCG 2200 0.23972923672390384 No Hit GAATGATACGGCTGTCTCTTATACACATCTGACGCAAGATGGCTCGTATGC 2051 0.22349302932760307 No Hit CGTTTTATTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 1238 0.13490217957463316 No Hit GAACTGTCTCTTATACACATCTGACGCAAGATGGCTCGTATGCCGTCTTCT 1143 0.1245502352615555 No Hit GATACTGAAGCTACGAATATACTGACTATGAAGACCTATGCTTTGATTCAT 1043 0.11365345177410532 No Hit GCTGTCTCTTATACACATCTGACGCAAGATGGCTCGTATGCCGTCTTCTGC 1040 0.11332654826948182 Illumina Single End Adapter 2 (95% over 21bp) CGTTTCTGTCTCTTATACACATCTGACGCAAGATGGCTCGTATGCCGTCTT 922 0.10046834375429062 No Hit >>END_MODULE >>Adapter Content fail #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 2.1793566974900348E-4 0.0 0.0 0.04838171868427878 0.0 2 2.1793566974900348E-4 0.0 0.0 0.26566358142403523 0.0 3 2.1793566974900348E-4 0.0 0.0 0.42758978404754483 0.0 4 2.1793566974900348E-4 0.0 0.0 0.748826961257576 0.0 5 2.1793566974900348E-4 0.0 0.0 1.625146289318319 0.0 6 2.1793566974900348E-4 0.0 0.0 2.349673423398881 0.0 7 2.1793566974900348E-4 0.0 0.0 2.8208503413962265 0.0 8 2.1793566974900348E-4 0.0 0.0 3.462017081797795 0.0 9 2.1793566974900348E-4 0.0 0.0 3.863127681970836 0.0 10 2.1793566974900348E-4 0.0 0.0 4.64529880070001 0.0 11 2.1793566974900348E-4 0.0 0.0 5.129007019707923 0.0 12 2.1793566974900348E-4 0.0 0.0 5.740534509023626 0.0 13 2.1793566974900348E-4 0.0 0.0 5.979174067398786 0.0 14 2.1793566974900348E-4 0.0 0.0 6.141645109196667 0.0 15 2.1793566974900348E-4 0.0 0.0 6.298122920076452 0.0 16 2.1793566974900348E-4 0.0 0.0 6.504507999328758 0.0 17 2.1793566974900348E-4 0.0 0.0 6.729199674839981 0.0 18 2.1793566974900348E-4 0.0 0.0 6.9864727329786795 0.0 19 2.1793566974900348E-4 0.0 0.0 7.163327528979996 0.0 20 2.1793566974900348E-4 0.0 0.0 7.339528517972065 0.0 21 2.1793566974900348E-4 0.0 0.0 7.538176880948281 0.0 22 2.1793566974900348E-4 0.0 0.0 7.761778878110759 0.0 23 2.1793566974900348E-4 0.0 0.0 7.98232977589675 0.0 24 2.1793566974900348E-4 0.0 0.0 8.17160690507376 0.0 25 2.1793566974900348E-4 0.0 0.0 8.354890803332673 0.0 26 2.1793566974900348E-4 0.0 0.0 8.533271149022232 0.0 27 2.1793566974900348E-4 0.0 0.0 8.723855892217735 0.0 28 2.1793566974900348E-4 0.0 0.0 8.917927606129222 0.0 29 2.1793566974900348E-4 0.0 0.0 9.132485272997117 0.0 30 2.1793566974900348E-4 0.0 0.0 9.412750544294335 0.0 31 2.1793566974900348E-4 0.0 0.0 9.652370813183364 0.0 32 2.1793566974900348E-4 0.0 0.0 9.940372800756673 0.0 33 2.1793566974900348E-4 0.0 0.0 10.176179195425094 0.0 34 2.1793566974900348E-4 0.0 0.0 10.412421461433015 0.0 35 2.1793566974900348E-4 0.0 0.0 10.665553741846482 0.0 36 2.1793566974900348E-4 0.0 0.0 10.903321557542645 0.0 37 2.1793566974900348E-4 0.0 0.0 11.160812551351093 0.0 38 2.1793566974900348E-4 0.0 0.0 11.456987126539987 0.0 39 2.1793566974900348E-4 0.0 0.0 11.893839176551866 0.0 >>END_MODULE >>Kmer Content warn #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position CGGCTAG 25 3.890189E-5 45.0 2 TTACGCG 20 7.032544E-4 45.0 1 CGTTTTT 8450 0.0 44.068047 1 CGTTTTA 475 0.0 39.789474 1 CACAACG 215 0.0 39.767445 12 CGGTCTA 65 9.094947E-12 38.07692 31 ACACGAC 95 0.0 37.894737 26 GCGGTAT 30 1.13974245E-4 37.500004 1 CGCATAG 30 1.13974245E-4 37.500004 2 TAACGCG 30 1.13974245E-4 37.500004 1 GCGCATA 30 1.13974245E-4 37.500004 1 TCTACGG 30 1.13974245E-4 37.500004 2 ACAACGA 230 0.0 37.173912 13 GTTTTTT 10290 0.0 37.12828 2 ATTAGCG 55 2.748493E-9 36.81818 1 AGCGACT 215 0.0 36.62791 19 TACGGCT 295 0.0 36.61017 7 CGTTGAT 150 0.0 36.000004 25 GCTATCG 25 0.0021068878 36.0 1 CACGACC 100 0.0 36.0 27 >>END_MODULE