##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR2936628.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 777772 Sequences flagged as poor quality 0 Sequence length 51 %GC 45 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 31.124699783484107 31.0 31.0 33.0 28.0 34.0 2 31.16954068801654 31.0 31.0 34.0 28.0 34.0 3 30.933429076901714 31.0 31.0 34.0 27.0 34.0 4 34.92155927444033 35.0 35.0 37.0 32.0 37.0 5 35.168827111287115 35.0 35.0 37.0 33.0 37.0 6 35.13937760680508 36.0 35.0 37.0 32.0 37.0 7 31.005717613902274 35.0 35.0 37.0 0.0 37.0 8 33.08377647948242 36.0 35.0 37.0 17.0 37.0 9 36.42352771763447 39.0 35.0 39.0 32.0 39.0 10 35.98961520857012 37.0 35.0 39.0 32.0 39.0 11 36.32382369126171 37.0 35.0 39.0 32.0 39.0 12 36.472052220959355 38.0 35.0 39.0 32.0 39.0 13 36.48732404869293 39.0 35.0 39.0 32.0 39.0 14 37.55459697700611 39.0 36.0 40.0 33.0 41.0 15 37.73915363371271 39.0 37.0 41.0 33.0 41.0 16 37.65712188147683 39.0 36.0 41.0 33.0 41.0 17 37.532924816012915 39.0 36.0 41.0 32.0 41.0 18 37.46688103968772 39.0 36.0 40.0 32.0 41.0 19 37.27351974614668 39.0 36.0 40.0 32.0 41.0 20 37.29478947557896 39.0 36.0 40.0 32.0 41.0 21 37.30267353414625 39.0 36.0 40.0 32.0 41.0 22 37.38864860138961 39.0 36.0 40.0 32.0 41.0 23 37.42705060094732 39.0 36.0 40.0 32.0 41.0 24 37.385844437701536 39.0 36.0 41.0 32.0 41.0 25 37.05738699773198 39.0 35.0 40.0 31.0 41.0 26 37.08333419048256 39.0 35.0 40.0 32.0 41.0 27 37.13020396722947 39.0 35.0 40.0 32.0 41.0 28 37.148915106226504 39.0 35.0 40.0 32.0 41.0 29 37.13912046203772 39.0 35.0 40.0 32.0 41.0 30 36.93826982714729 39.0 35.0 40.0 31.0 41.0 31 36.935339662523205 39.0 35.0 40.0 31.0 41.0 32 36.814410907052455 39.0 35.0 40.0 31.0 41.0 33 36.70387337163076 39.0 35.0 40.0 31.0 41.0 34 36.64975982678728 39.0 35.0 40.0 30.0 41.0 35 36.59236382898845 39.0 35.0 40.0 30.0 41.0 36 36.559023724176235 39.0 35.0 40.0 30.0 41.0 37 36.52185473377802 39.0 35.0 40.0 30.0 41.0 38 36.41355950072772 39.0 35.0 40.0 30.0 41.0 39 36.37734708886409 39.0 35.0 40.0 30.0 41.0 40 36.30581455747957 39.0 35.0 40.0 30.0 41.0 41 36.169324686411954 39.0 35.0 40.0 30.0 41.0 42 36.20791825882135 39.0 35.0 40.0 30.0 41.0 43 36.16535179975622 39.0 35.0 40.0 30.0 41.0 44 35.99973642661345 39.0 35.0 40.0 29.0 41.0 45 35.89202876935657 38.0 35.0 40.0 29.0 41.0 46 35.78939972125507 38.0 35.0 40.0 28.0 41.0 47 35.77276116908297 38.0 35.0 40.0 28.0 41.0 48 35.71454359375241 38.0 35.0 40.0 28.0 41.0 49 35.61732744300386 38.0 35.0 40.0 28.0 41.0 50 35.45990727359689 38.0 34.0 40.0 27.0 41.0 51 33.91736781473234 37.0 32.0 40.0 23.0 41.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 6 1.0 7 2.0 8 33.0 9 50.0 10 60.0 11 56.0 12 32.0 13 27.0 14 35.0 15 43.0 16 99.0 17 171.0 18 349.0 19 611.0 20 1000.0 21 1515.0 22 2227.0 23 3277.0 24 4719.0 25 6465.0 26 8046.0 27 9599.0 28 10676.0 29 12783.0 30 16067.0 31 20614.0 32 26741.0 33 37266.0 34 55966.0 35 63657.0 36 78037.0 37 119695.0 38 164257.0 39 133593.0 40 3.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 42.11041282020952 21.87710537278277 25.298416502522592 10.71406530448512 2 33.85979438704402 24.67034040824303 24.297737640336756 17.17212756437619 3 32.14695309165154 24.390824046121484 27.28858842951405 16.17363443271293 4 28.056808422005417 26.198551760670224 26.479353846628573 19.265285970695782 5 26.039379149673685 30.11216654752292 25.377359946102455 18.471094356700934 6 25.805120266607695 34.827173001856586 25.78956300818235 13.578143723353373 7 70.51668098105873 17.597573581975183 8.606635363576986 3.2791100733891168 8 82.88804431118632 5.348482588727802 8.109445955884244 3.6540271442016428 9 76.83279932936644 7.396383515991833 9.85571607103367 5.915101083608049 10 36.82313068611367 30.642784774972615 18.446537031417947 14.08754750749577 11 27.674177008172062 27.66324835555921 26.71926991457651 17.94330472169222 12 24.9642568773368 24.745812397463524 30.81237174904728 19.477558976152395 13 23.643175635019002 26.850413745930684 31.301846813719187 18.204563805331127 14 20.937241248077843 29.73454945665311 29.557119567173928 19.771089728095124 15 19.800918521109015 28.652741420364837 33.18221792504744 18.364122133478705 16 23.364044990048498 27.524904470718926 30.417911675915306 18.693138863317273 17 22.922398852105758 27.246545260050503 28.700698919477684 21.13035696836605 18 24.8279701506354 26.153937143533067 29.469690346271143 19.548402359560384 19 23.103557340711674 29.03652998565132 28.047936927531463 19.811975746105542 20 24.69091198963192 27.21581646035085 29.840750245573254 18.252521304443974 21 23.087357220367924 28.74274208894123 29.947979613562843 18.221921077128002 22 22.96817062069604 24.781812664894083 30.125666647809386 22.124350066600496 23 20.709668128963244 29.009015495543682 29.978194123727775 20.3031222517653 24 21.451016493265378 26.08875094500702 31.451247923556004 21.008984638171597 25 20.377437089532666 30.246524688469112 28.72127050086658 20.65476772113164 26 21.071085099489313 28.810114017989847 29.02508704350375 21.093713839017088 27 21.148871391616055 29.025729905422153 28.948715047597496 20.876683655364296 28 19.759389641180192 28.2971102071044 30.709128124951786 21.234372026763626 29 20.203735799180222 27.4324609268526 30.201010064646194 22.162793209320984 30 21.204286088982375 27.722648796819634 29.79446418744825 21.278600926749743 31 21.725775677190747 28.272295737054048 28.16455207952973 21.837376506225475 32 21.553488683058788 28.84457141681624 28.56274075178844 21.03919914833653 33 21.266129405532727 28.613012553807543 28.47068292507316 21.650175115586574 34 19.70873212201005 28.954757949630483 28.996286829559303 22.340223098800163 35 19.61101711041282 29.212417006526337 29.784306969137486 21.39225891392336 36 20.91204106087645 29.443204435232946 28.62676979886136 21.01798470502924 37 20.595624424638583 28.53972629510962 29.524333609335386 21.340315670916414 38 19.56280246653261 30.266453407939604 28.074037121418616 22.096707004109174 39 20.425394588645513 27.986350755748475 29.79446418744825 21.793790468157763 40 21.54526005050323 28.713427585462064 28.961700858349232 20.779611505685473 41 19.29858621806905 28.501926014307532 28.86771444587874 23.331773321744677 42 21.199400338402512 27.756334761343943 29.159573756833623 21.884691143419925 43 21.75701876642512 26.735341462536578 29.250088714944738 22.25755105609356 44 21.11904259860216 27.41484651028836 28.215209598699875 23.2509012924096 45 20.443266149977113 27.62184804801407 28.668427251173867 23.266458550834948 46 21.503088308656007 29.205345525423905 27.15487315048626 22.136693015433828 47 19.137742166084664 29.012872667054097 29.691349135736438 22.1580360311248 48 20.413951646497946 28.089980096995003 29.328903586140925 22.167164670366123 49 20.994455958815696 26.918814254048744 30.254881893408353 21.83184789372721 50 19.134270711725286 27.64871967620331 29.982822729540278 23.234186882531127 51 19.2691431422062 27.230345139706753 28.694141727909976 24.80636999017707 >>END_MODULE >>Per sequence GC content warn #GC Content Count 0 325.0 1 693.0 2 1061.0 3 2960.0 4 4859.0 5 3597.5 6 2336.0 7 2240.5 8 2145.0 9 2122.0 10 2099.0 11 2019.5 12 1940.0 13 1950.0 14 1960.0 15 1968.0 16 1976.0 17 2151.5 18 2327.0 19 2622.0 20 2917.0 21 2949.5 22 2982.0 23 3466.5 24 3951.0 25 4859.5 26 6919.5 27 8071.0 28 10024.5 29 11978.0 30 13904.5 31 15831.0 32 18380.5 33 20930.0 34 25015.0 35 29100.0 36 31629.0 37 34158.0 38 36711.5 39 39265.0 40 42993.0 41 46721.0 42 51953.0 43 57185.0 44 66306.0 45 75427.0 46 73661.5 47 71896.0 48 70816.5 49 69737.0 50 64887.5 51 60038.0 52 54139.0 53 48240.0 54 43987.5 55 39735.0 56 35958.0 57 32181.0 58 28276.5 59 24372.0 60 21916.5 61 19461.0 62 16820.5 63 14180.0 64 11602.5 65 9025.0 66 7228.5 67 5432.0 68 4558.0 69 3684.0 70 2759.5 71 1835.0 72 1539.5 73 1244.0 74 999.0 75 551.5 76 349.0 77 237.0 78 125.0 79 111.0 80 97.0 81 57.5 82 18.0 83 19.5 84 21.0 85 15.5 86 10.0 87 10.5 88 11.0 89 8.0 90 5.0 91 4.0 92 3.0 93 3.0 94 3.0 95 2.5 96 2.0 97 2.0 98 2.0 99 1.0 100 0.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 44 0.0 45 0.0 46 0.0 47 0.0 48 0.0 49 0.0 50 0.0 51 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 51 777772.0 >>END_MODULE >>Sequence Duplication Levels fail #Total Deduplicated Percentage 32.75299631378682 #Duplication Level Percentage of deduplicated Percentage of total 1 74.50532219378614 24.40272543170576 2 9.270309826783159 6.07260847168581 3 3.7057531863639532 3.64123561358347 4 2.1057512887735124 2.7587865679580275 5 1.4769208998319996 2.4186792393976093 6 1.081523837429358 2.12538877563578 7 0.832785851473705 1.9093362346444451 8 0.6290353661872558 1.6482234423978182 9 0.495970201540145 1.4620059164513226 >10 5.451713170271435 42.07113753966738 >50 0.40748055747673656 8.053830591203209 >100 0.03470408528493133 1.9652771706512175 >500 7.798670850546366E-4 0.13908154658429786 >1k 0.001949667712636591 1.3316834584338604 >5k 0.0 0.0 >10k+ 0.0 0.0 >>END_MODULE >>Overrepresented sequences warn #Sequence Count Percentage Possible Source GAATGATACCTGTCTCTTATACACATCTGACGCCGCTAAATTCGTATGCCG 2377 0.30561655600870175 No Hit GAATCTGTCTCTTATACACATCTGACGCCGCTAAATTCGTATGCCGTCTTC 2330 0.2995736539757152 No Hit GAATGATACGGCTGTCTCTTATACACATCTGACGCCGCTAAATTCGTATGC 2224 0.28594498130557544 No Hit CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 2202 0.283116388864603 No Hit GCTGTCTCTTATACACATCTGACGCCGCTAAATTCGTATGCCGTCTTCTGC 1294 0.16637266448265045 No Hit >>END_MODULE >>Adapter Content fail #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 1.2857238368056448E-4 0.0 0.0 0.0821577531718807 0.0 2 1.2857238368056448E-4 0.0 0.0 0.44010326933857224 0.0 3 1.2857238368056448E-4 0.0 0.0 0.5838471942934433 0.0 4 1.2857238368056448E-4 0.0 0.0 0.8944780732656871 0.0 5 1.2857238368056448E-4 0.0 0.0 1.7805989415921375 0.0 6 1.2857238368056448E-4 0.0 0.0 2.2423023713890444 0.0 7 1.2857238368056448E-4 0.0 0.0 2.6384338855088636 0.0 8 1.2857238368056448E-4 0.0 0.0 3.3478962986582186 0.0 9 1.2857238368056448E-4 0.0 0.0 3.5584978631269832 0.0 10 1.2857238368056448E-4 0.0 0.0 4.442690145698225 0.0 11 1.2857238368056448E-4 0.0 0.0 5.300525089614951 0.0 12 1.2857238368056448E-4 0.0 0.0 6.2694465730316855 0.0 13 1.2857238368056448E-4 0.0 0.0 6.587791795024763 0.0 14 1.2857238368056448E-4 0.0 0.0 6.741178648755676 0.0 15 1.2857238368056448E-4 0.0 0.0 6.998966278035208 0.0 16 1.2857238368056448E-4 0.0 0.0 7.4957699685769095 0.0 17 1.2857238368056448E-4 0.0 0.0 8.13130326110994 0.0 18 1.2857238368056448E-4 0.0 0.0 8.816208348976307 0.0 19 1.2857238368056448E-4 0.0 0.0 9.248468702910364 0.0 20 1.2857238368056448E-4 0.0 0.0 9.65051454667949 0.0 21 1.2857238368056448E-4 0.0 0.0 10.187432820929526 0.0 22 1.2857238368056448E-4 0.0 0.0 10.726279680934773 0.0 23 1.2857238368056448E-4 0.0 0.0 11.295598195872312 0.0 24 1.2857238368056448E-4 0.0 0.0 11.701244066384493 0.0 25 1.2857238368056448E-4 0.0 0.0 12.102261331084174 0.0 26 1.2857238368056448E-4 0.0 0.0 12.479364132419269 0.0 27 1.2857238368056448E-4 0.0 0.0 12.880638541886311 0.0 28 1.2857238368056448E-4 0.0 0.0 13.275870049320366 0.0 29 1.2857238368056448E-4 0.0 0.0 13.692316000061714 0.0 30 1.2857238368056448E-4 0.0 0.0 14.179991051362096 0.0 31 1.2857238368056448E-4 0.0 0.0 14.618037162561778 0.0 32 1.2857238368056448E-4 0.0 0.0 15.043997469695489 0.0 33 2.5714476736112896E-4 0.0 0.0 15.475872106478505 0.0 34 2.5714476736112896E-4 0.0 0.0 15.881260832223326 0.0 35 2.5714476736112896E-4 0.0 0.0 16.322006963480302 0.0 36 2.5714476736112896E-4 0.0 0.0 16.731638577886578 0.0 37 3.8571715104169347E-4 0.0 0.0 17.1694275443189 0.0 38 3.8571715104169347E-4 0.0 0.0 17.62765951975643 0.0 39 3.8571715104169347E-4 0.0 0.0 18.093220121063755 0.0 >>END_MODULE >>Kmer Content warn #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position CCGGCTA 20 7.0318783E-4 45.0 44 TAACGCC 20 7.0318783E-4 45.0 12 CTTATCG 20 7.0318783E-4 45.0 32 TGTTACG 20 7.0318783E-4 45.0 1 GAACCGG 25 3.889638E-5 45.0 2 ATACGTC 25 3.889638E-5 45.0 42 TGTCGTA 20 7.0318783E-4 45.0 44 CGATAAT 20 7.0318783E-4 45.0 36 TCGGTAA 20 7.0318783E-4 45.0 41 TACGTCC 20 7.0318783E-4 45.0 12 TATCGCG 30 2.1645938E-6 44.999996 1 CGTTTTA 120 0.0 43.124996 1 CGAACGG 65 0.0 41.538464 2 GCGAACG 50 1.0804797E-9 40.5 1 CGTTTTT 1595 0.0 40.485893 1 CGCCGGT 145 0.0 40.344826 28 CTACGGG 190 0.0 40.26316 3 ACAACGT 45 1.9268555E-8 40.0 22 GGCTACG 45 1.9268555E-8 40.0 1 TTGCGCG 85 0.0 39.705883 1 >>END_MODULE