##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR2936625.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 835004 Sequences flagged as poor quality 0 Sequence length 51 %GC 47 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 31.1856649788504 31.0 31.0 33.0 28.0 34.0 2 31.22255222729472 31.0 31.0 34.0 28.0 34.0 3 31.045774631019732 31.0 31.0 34.0 28.0 34.0 4 35.00548620126371 35.0 35.0 37.0 32.0 37.0 5 35.207422958452895 35.0 35.0 37.0 33.0 37.0 6 35.18039913581252 36.0 35.0 37.0 32.0 37.0 7 31.046487202456515 35.0 35.0 37.0 0.0 37.0 8 33.05431710506776 35.0 35.0 37.0 17.0 37.0 9 36.30338657060325 39.0 35.0 39.0 32.0 39.0 10 36.10435279351955 37.0 35.0 39.0 32.0 39.0 11 36.39730588116943 37.0 35.0 39.0 32.0 39.0 12 36.48078811598507 38.0 35.0 39.0 32.0 39.0 13 36.423314139812504 39.0 35.0 39.0 32.0 39.0 14 37.51519393919071 39.0 36.0 40.0 32.0 41.0 15 37.66571776901667 39.0 36.0 41.0 33.0 41.0 16 37.633022117259316 39.0 36.0 41.0 33.0 41.0 17 37.517956800206946 39.0 36.0 41.0 32.0 41.0 18 37.45157627987411 39.0 36.0 40.0 32.0 41.0 19 37.261059827258315 39.0 36.0 40.0 32.0 41.0 20 37.239032387868804 39.0 35.0 40.0 32.0 41.0 21 37.28793754281416 39.0 35.0 40.0 32.0 41.0 22 37.3764640648428 39.0 36.0 40.0 32.0 41.0 23 37.453397828034355 39.0 36.0 41.0 33.0 41.0 24 37.39658253134117 39.0 35.0 41.0 32.0 41.0 25 37.10458991813213 39.0 35.0 40.0 32.0 41.0 26 37.05475662392036 39.0 35.0 40.0 32.0 41.0 27 37.082963674425514 39.0 35.0 40.0 32.0 41.0 28 37.06159850731254 39.0 35.0 40.0 32.0 41.0 29 37.048885993360514 39.0 35.0 40.0 31.0 41.0 30 36.876671249479045 39.0 35.0 40.0 31.0 41.0 31 36.8886220904331 39.0 35.0 40.0 31.0 41.0 32 36.76915799205752 39.0 35.0 40.0 31.0 41.0 33 36.65650104670157 39.0 35.0 40.0 31.0 41.0 34 36.57915051903943 39.0 35.0 40.0 30.0 41.0 35 36.56951104425847 39.0 35.0 40.0 30.0 41.0 36 36.5014191548783 39.0 35.0 40.0 30.0 41.0 37 36.42203510402345 39.0 35.0 40.0 30.0 41.0 38 36.33409061513478 39.0 35.0 40.0 30.0 41.0 39 36.259663426762025 39.0 35.0 40.0 30.0 41.0 40 36.16148186116474 39.0 35.0 40.0 30.0 41.0 41 35.97481688710473 38.0 35.0 40.0 29.0 41.0 42 35.97812106289311 38.0 35.0 40.0 29.0 41.0 43 35.92934524864552 38.0 35.0 40.0 29.0 41.0 44 35.7700274489703 38.0 35.0 40.0 29.0 41.0 45 35.72874261680184 38.0 35.0 40.0 28.0 41.0 46 35.60970366609022 38.0 35.0 40.0 28.0 41.0 47 35.54126447298456 38.0 34.0 40.0 28.0 41.0 48 35.45130442488898 38.0 34.0 40.0 27.0 41.0 49 35.36316233215649 38.0 34.0 40.0 27.0 41.0 50 35.2205654104651 38.0 34.0 40.0 27.0 41.0 51 33.60210130729913 36.0 32.0 39.0 22.0 40.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 7 4.0 8 35.0 9 71.0 10 73.0 11 68.0 12 44.0 13 31.0 14 36.0 15 44.0 16 102.0 17 189.0 18 323.0 19 683.0 20 1233.0 21 2020.0 22 2780.0 23 3760.0 24 5191.0 25 6926.0 26 8437.0 27 10104.0 28 11637.0 29 13857.0 30 17344.0 31 22539.0 32 29707.0 33 41366.0 34 62822.0 35 70000.0 36 84097.0 37 126906.0 38 171900.0 39 140671.0 40 4.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 44.24757246671872 20.628284415403996 23.904675905744163 11.219467212133114 2 32.37541377047295 26.297359054567405 24.75784547139894 16.5693817035607 3 32.674334494206015 25.06215539087238 26.66645908283074 15.597051032090864 4 28.683694928407526 25.22790309986539 27.532802238073113 18.55559973365397 5 27.478790520763972 29.569319428409923 24.47329593630689 18.47859411451921 6 25.989695857744394 35.96258221517502 24.37221857619844 13.67550335088215 7 68.92829255907756 17.97931506914937 9.555044047693183 3.5373483240798844 8 80.43266858601875 7.621759895760978 8.238643168176441 3.7069283500438326 9 73.63377899986108 8.164511786769884 10.329890635254442 7.871818578114596 10 40.16304113513229 27.376156281886075 17.804585367255726 14.656217215725913 11 30.402369329967282 26.407777687292516 25.342273809466782 17.84757917327342 12 28.01375801792566 24.405751349694132 28.220224094734874 19.36026653764533 13 25.696763129278423 24.438805083568464 30.65446393071171 19.209967856441406 14 21.327322982883913 28.21172114145561 29.121058102715676 21.3398977729448 15 19.551523106476136 26.810650008862236 34.10917792010577 19.52864896455586 16 23.14611666530939 26.430891349023476 29.928958424151265 20.494033561515874 17 23.33761275395088 25.417602789926757 28.990879085609173 22.253905370513195 18 24.061681141647227 26.233167745304215 29.092435485338992 20.61271562770957 19 24.54287644131046 27.093403145374158 27.4172339294183 20.946486483897083 20 26.168257876608976 26.760710128334715 28.2446551154246 18.826376879631717 21 25.059999712576225 27.97519532840561 28.337469042064466 18.62733591695369 22 23.756532902836394 25.09053848843838 29.08680676978793 22.0661218389373 23 22.74779522014266 26.80921288999813 29.60357076133767 20.83942112852154 24 22.75749577247534 25.696763129278423 29.5486009647858 21.997140133460437 25 22.343366019803497 28.19950563111075 27.76717237282696 21.689955976258794 26 21.28840101364784 27.63651431609909 28.902256755656257 22.172827914596816 27 22.212468443264942 27.749567666741715 28.621300017724465 21.416663872268877 28 19.923976412089043 27.344180387159824 30.605601889332267 22.126241311418866 29 22.26037240540165 26.49807665592021 29.726324664312987 21.515226274365155 30 21.623608988699456 26.68274642995722 30.415542919554877 21.278101661788444 31 22.857734813246402 26.315802079990036 27.744897030433386 23.081566076330173 32 23.628389804120697 28.567288300415328 26.80214705558297 21.002174839881008 33 22.95833313373349 26.56430388357421 26.898194499667067 23.57916848302523 34 21.501932924872218 26.316161359706065 29.290278848963595 22.891626866458125 35 20.810798511144856 26.55532189067358 28.94608888101135 23.687790717170216 36 22.249354494110207 27.364779090878606 28.396510675397963 21.989355739613224 37 21.53869921581214 28.55686918865059 28.632796968637276 21.271634626899992 38 21.117264108914448 27.870405411231562 26.693764341248666 24.318566138605323 39 22.7180947636179 26.667417162073477 27.49891018486139 23.115577889447238 40 23.148631623321563 24.669941700878077 28.640102322863125 23.54132435293723 41 20.80421171635106 25.83412774070543 28.342139678372796 25.01952086457071 42 21.68887813711072 26.150533410618394 28.674712935506896 23.48587551676399 43 23.025518440630226 25.845864211428925 27.47388036464496 23.654736983295887 44 21.65055496740135 26.12801854841414 28.16920637505928 24.052220109125226 45 21.411633956244522 25.245627565855973 27.662981255179613 25.67975722271989 46 21.74217129498781 27.649568145781338 26.829093034284867 23.779167524945986 47 20.642176564423643 25.629458062476346 30.57793735119832 23.150428021901693 48 20.9949892455605 25.71628399384913 29.380697577496633 23.908029183093735 49 20.56409310614081 25.238082691819443 30.225483949777487 23.972340252262264 50 19.769725654008845 25.503949681678172 30.25398680724883 24.472337857064158 51 20.52085978031243 24.9294614157537 28.55339615139568 25.996282652538195 >>END_MODULE >>Per sequence GC content warn #GC Content Count 0 252.0 1 748.0 2 1244.0 3 3319.0 4 5394.0 5 3743.0 6 2092.0 7 1984.5 8 1877.0 9 1885.0 10 1893.0 11 1833.0 12 1773.0 13 1807.0 14 1841.0 15 1801.0 16 1761.0 17 1903.5 18 2046.0 19 2242.5 20 2439.0 21 2867.0 22 3295.0 23 3696.5 24 4098.0 25 4894.5 26 7344.5 27 8998.0 28 10638.0 29 12278.0 30 14442.5 31 16607.0 32 19139.0 33 21671.0 34 24775.5 35 27880.0 36 29634.5 37 31389.0 38 34173.0 39 36957.0 40 40325.0 41 43693.0 42 46350.0 43 49007.0 44 50675.5 45 52344.0 46 55241.0 47 58138.0 48 70615.5 49 83093.0 50 74151.5 51 65210.0 52 62532.5 53 59855.0 54 55044.5 55 50234.0 56 46408.0 57 42582.0 58 39662.5 59 36743.0 60 34092.5 61 31442.0 62 28160.0 63 24878.0 64 20730.0 65 16582.0 66 14187.5 67 11793.0 68 9442.0 69 7091.0 70 5708.5 71 4326.0 72 3594.5 73 2863.0 74 2335.0 75 1372.5 76 938.0 77 703.0 78 468.0 79 329.0 80 190.0 81 149.5 82 109.0 83 84.0 84 59.0 85 52.0 86 45.0 87 33.0 88 21.0 89 15.5 90 10.0 91 8.5 92 7.0 93 3.5 94 0.0 95 0.0 96 0.0 97 0.0 98 0.0 99 0.0 100 0.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 44 0.0 45 0.0 46 0.0 47 0.0 48 0.0 49 0.0 50 0.0 51 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 51 835004.0 >>END_MODULE >>Sequence Duplication Levels fail #Total Deduplicated Percentage 29.71658454663404 #Duplication Level Percentage of deduplicated Percentage of total 1 72.91523470948371 21.667917369820376 2 8.930584342813148 5.307729293481062 3 3.786347246626979 3.375519242319168 4 2.3352778626853548 2.7758592818548875 5 1.5628726964814845 2.3221619310308976 6 1.142005452422568 2.036190094777938 7 0.8640158494516227 1.797292002790268 8 0.6877469150418137 1.6349991478021435 9 0.5427474918534535 1.4515741556223047 >10 6.885614073976902 47.63629919332884 >50 0.31471997780453764 5.615011305536973 >100 0.02802849628157932 1.4381996323160606 >500 0.002402442538421083 0.49046569739445695 >1k 0.002002035448684236 1.8332375060059187 >5k 4.004070897368472E-4 0.6175441459187848 >10k+ 0.0 0.0 >>END_MODULE >>Overrepresented sequences warn #Sequence Count Percentage Possible Source GAATGATACGGCTGTCTCTTATACACATCTGACGCTTCACCCGTCGTATGC 5190 0.6215539087237906 No Hit GAATGATACCTGTCTCTTATACACATCTGACGCTTCACCCGTCGTATGCCG 4907 0.5876618555120694 No Hit GAATCTGTCTCTTATACACATCTGACGCTTCACCCGTCGTATGCCGTCTTC 4267 0.5110155160933361 No Hit CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 2802 0.3355672547676418 No Hit GCTGTCTCTTATACACATCTGACGCTTCACCCGTCGTATGCCGTCTTCTGC 1805 0.21616662914189633 No Hit GAATGCTGTCTCTTATACACATCTGACGCTTCACCCGTCGTATGCCGTCTT 1626 0.19472960608571935 No Hit GAATGACTGTCTCTTATACACATCTGACGCTTCACCCGTCGTATGCCGTCT 862 0.10323303840460644 No Hit GAACTGTCTCTTATACACATCTGACGCTTCACCCGTCGTATGCCGTCTTCT 859 0.10287375868858113 No Hit >>END_MODULE >>Adapter Content fail #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 4.790396213670833E-4 0.0 0.0 0.08622713184607499 0.0 2 4.790396213670833E-4 0.0 0.0 0.47939890108310856 0.0 3 4.790396213670833E-4 0.0 0.0 0.6001168856676136 0.0 4 4.790396213670833E-4 0.0 0.0 0.8651455561889524 0.0 5 4.790396213670833E-4 0.0 0.0 1.8324463116344354 0.0 6 4.790396213670833E-4 0.0 0.0 2.335198394259189 0.0 7 4.790396213670833E-4 0.0 0.0 2.673280607039008 0.0 8 4.790396213670833E-4 0.0 0.0 3.1622603005494585 0.0 9 4.790396213670833E-4 0.0 0.0 3.3048943478115076 0.0 10 4.790396213670833E-4 0.0 0.0 4.349799521918458 0.0 11 4.790396213670833E-4 0.0 0.0 4.941533214212147 0.0 12 4.790396213670833E-4 0.0 0.0 6.155539374661679 0.0 13 4.790396213670833E-4 0.0 0.0 6.444040986630005 0.0 14 4.790396213670833E-4 0.0 0.0 6.597932464994179 0.0 15 4.790396213670833E-4 0.0 0.0 6.8588892987338985 0.0 16 4.790396213670833E-4 0.0 0.0 7.249546109958755 0.0 17 4.790396213670833E-4 0.0 0.0 7.694693678114117 0.0 18 4.790396213670833E-4 0.0 0.0 8.163194427811124 0.0 19 4.790396213670833E-4 0.0 0.0 8.47948033781874 0.0 20 4.790396213670833E-4 0.0 0.0 8.790736331802004 0.0 21 4.790396213670833E-4 0.0 0.0 9.161992038361493 0.0 22 4.790396213670833E-4 0.0 0.0 9.571810434441032 0.0 23 4.790396213670833E-4 0.0 0.0 9.95372477257594 0.0 24 4.790396213670833E-4 0.0 0.0 10.271328041542317 0.0 25 4.790396213670833E-4 0.0 0.0 10.557793735119832 0.0 26 4.790396213670833E-4 0.0 0.0 10.844977988129399 0.0 27 4.790396213670833E-4 0.0 0.0 11.141743033566307 0.0 28 4.790396213670833E-4 0.0 0.0 11.43144224458805 0.0 29 4.790396213670833E-4 0.0 0.0 11.73838688197901 0.0 30 4.790396213670833E-4 0.0 0.0 12.102696514028676 0.0 31 4.790396213670833E-4 0.0 0.0 12.429401535801025 0.0 32 4.790396213670833E-4 0.0 0.0 12.747244324578086 0.0 33 4.790396213670833E-4 0.0 0.0 13.068919430326082 0.0 34 4.790396213670833E-4 0.0 0.0 13.401851967176205 0.0 35 5.987995267088541E-4 0.0 0.0 13.74975449219405 0.0 36 5.987995267088541E-4 0.0 0.0 14.088914544121945 0.0 37 5.987995267088541E-4 0.0 0.0 14.440050586584016 0.0 38 7.185594320506249E-4 0.0 0.0 14.79130638895143 0.0 39 8.383193373923957E-4 0.0 0.0 15.227711484016844 0.0 >>END_MODULE >>Kmer Content warn #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position CGCGAAT 25 3.8898856E-5 45.0 27 TCGCGCA 25 3.8898856E-5 45.0 34 TAGTACG 25 3.8898856E-5 45.0 1 ATTAGCG 30 2.1647866E-6 44.999996 1 CGACGGT 100 0.0 42.75 28 TTAGCGG 130 0.0 41.53846 2 ACGTGCG 65 0.0 41.53846 1 TACGGCT 640 0.0 41.484375 7 CGCATAG 55 6.002665E-11 40.909092 2 CGGTCTA 55 6.002665E-11 40.909092 31 GCTTGCG 45 1.9272193E-8 40.0 1 GTTAGCG 40 3.4567165E-7 39.375 1 CGGGATA 195 0.0 39.23077 6 CGTTTTT 1485 0.0 38.939396 1 TACGGGA 215 0.0 38.720932 4 CTATCGA 35 6.246235E-6 38.57143 14 ACGGAAC 35 6.246235E-6 38.57143 40 TCTATCG 35 6.246235E-6 38.57143 13 TCACGAC 65 9.094947E-12 38.07692 25 CGCTCAT 65 9.094947E-12 38.07692 13 >>END_MODULE