##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR2936623.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 434681 Sequences flagged as poor quality 0 Sequence length 51 %GC 47 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 31.141759129108472 31.0 31.0 33.0 28.0 34.0 2 31.212820436135924 31.0 31.0 34.0 28.0 34.0 3 30.944255672550675 31.0 31.0 34.0 27.0 34.0 4 34.90868475962832 35.0 35.0 37.0 32.0 37.0 5 35.163936311916096 35.0 35.0 37.0 33.0 37.0 6 35.141789036097734 36.0 35.0 37.0 32.0 37.0 7 30.826037945067764 35.0 35.0 37.0 0.0 37.0 8 32.98229736289371 35.0 35.0 37.0 17.0 37.0 9 36.28728193778886 39.0 35.0 39.0 32.0 39.0 10 36.200224992580765 37.0 35.0 39.0 32.0 39.0 11 36.36600863621828 38.0 35.0 39.0 32.0 39.0 12 36.29165525983422 38.0 35.0 39.0 32.0 39.0 13 36.06779684412247 38.0 35.0 39.0 31.0 39.0 14 36.85630611873995 39.0 35.0 40.0 31.0 41.0 15 37.14449676889489 39.0 35.0 41.0 31.0 41.0 16 37.20070120387135 39.0 35.0 40.0 32.0 41.0 17 37.14395844308815 39.0 35.0 40.0 32.0 41.0 18 37.06602312960539 39.0 35.0 40.0 32.0 41.0 19 36.83849075528951 38.0 35.0 40.0 31.0 41.0 20 36.77051907030673 38.0 35.0 40.0 31.0 41.0 21 36.76503918965862 38.0 35.0 40.0 31.0 41.0 22 36.91486860479294 39.0 35.0 40.0 32.0 41.0 23 36.9949204129005 39.0 35.0 40.0 32.0 41.0 24 36.92183233221604 39.0 35.0 40.0 32.0 41.0 25 36.62019503958075 38.0 35.0 40.0 31.0 41.0 26 36.576638960525074 38.0 35.0 40.0 31.0 41.0 27 36.60641711968087 38.0 35.0 40.0 31.0 41.0 28 36.59514218472857 38.0 35.0 40.0 31.0 41.0 29 36.54626266158401 38.0 35.0 40.0 31.0 41.0 30 36.318350698558255 38.0 35.0 40.0 30.0 41.0 31 36.20285220656067 38.0 35.0 40.0 30.0 41.0 32 36.00949661935994 38.0 35.0 40.0 30.0 41.0 33 35.84000220851613 38.0 35.0 40.0 29.0 41.0 34 35.66705469068121 38.0 35.0 40.0 29.0 41.0 35 35.549695063736394 38.0 34.0 40.0 28.0 41.0 36 35.44801590131614 38.0 34.0 40.0 27.0 41.0 37 35.31435926576041 38.0 34.0 40.0 27.0 41.0 38 35.15068521513478 38.0 34.0 40.0 26.0 41.0 39 35.074969920470416 38.0 34.0 40.0 25.0 41.0 40 34.93703198437475 38.0 34.0 40.0 24.0 41.0 41 34.755629990728835 38.0 34.0 40.0 24.0 41.0 42 34.764314520303394 38.0 34.0 40.0 24.0 41.0 43 34.74921839233829 37.0 34.0 40.0 24.0 41.0 44 34.547088554595206 37.0 34.0 40.0 23.0 41.0 45 34.479004143268284 37.0 33.0 40.0 23.0 41.0 46 34.45329333465231 37.0 33.0 40.0 23.0 41.0 47 34.36033090933351 37.0 33.0 40.0 23.0 41.0 48 34.26244533347443 37.0 33.0 40.0 23.0 41.0 49 34.1804587732153 36.0 33.0 40.0 23.0 41.0 50 34.019540766677174 36.0 33.0 40.0 23.0 41.0 51 32.340877563086494 35.0 31.0 39.0 18.0 40.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 8 20.0 9 40.0 10 31.0 11 45.0 12 23.0 13 28.0 14 26.0 15 24.0 16 75.0 17 143.0 18 276.0 19 498.0 20 820.0 21 1234.0 22 1856.0 23 2677.0 24 3928.0 25 5372.0 26 6899.0 27 7602.0 28 8262.0 29 9361.0 30 11119.0 31 13927.0 32 18215.0 33 25440.0 34 38794.0 35 38899.0 36 42888.0 37 61807.0 38 76834.0 39 57515.0 40 3.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 42.08028416240875 19.865372537562028 24.369135066865127 13.68520823316409 2 35.8041874386044 23.102228990915176 24.32588495931499 16.76769861116543 3 32.28781566252033 22.96235630266793 28.773744424071907 15.97608361073983 4 28.891762004780517 24.46023635723669 28.540930015344586 18.10707162263821 5 25.832507056899196 28.468002972294627 27.19419528343774 18.505294687368437 6 26.169535820521254 32.81739942624591 27.30301071360377 13.71005403962906 7 66.4687437454133 18.166425493637863 11.68328038262542 3.6815503783234145 8 77.76622396654098 6.439664949698745 11.403074898603803 4.391036185156471 9 71.73421428587861 6.856062261750571 13.96403339460432 7.445690057766501 10 45.01899093818225 22.454167538953854 19.627266892272726 12.899574630591168 11 34.703610233711615 23.344015496421513 25.402766626560624 16.549607643306242 12 31.096827328546684 20.95881807578431 29.48000947821506 18.46434511745395 13 26.74743087459539 23.637794152493438 32.224320823776516 17.39045414913465 14 20.767183290735044 26.582482326119617 32.755745017610614 19.894589365534728 15 18.917781085439668 23.648146571853843 38.421048999151104 19.01302334355539 16 24.710074744467782 23.477676733052512 32.537423995987865 19.27482452649184 17 25.255992325406446 23.175386087728704 29.28676431682084 22.281857270044007 18 26.829790121951504 22.393433345372813 31.280410231871187 19.4963663008045 19 26.07360340111484 24.289076357144666 28.234728456040177 21.402591785700317 20 25.51434270188943 26.264548024873413 29.852696575189626 18.368412698047536 21 23.774216034287214 26.075673884986923 31.60915706000492 18.540953020720945 22 23.70589006650854 21.761705710624575 32.39663109268636 22.13577313018052 23 22.00188183978596 25.188586572682038 31.48492802768007 21.324603559851937 24 23.47077512014558 24.025894851626823 30.764859747723044 21.738470280504554 25 23.073242216706046 26.00159657311914 29.277332112514692 21.647829097660125 26 21.630345011629217 25.306604153390648 29.54603490835808 23.51701592662205 27 21.72420694716355 25.694704852524037 31.13869711351543 21.442391086796984 28 19.91644447307336 25.561043615893038 31.79849130741854 22.724020603615063 29 22.02925823765014 25.749457648252395 30.7729116294478 21.448372484649664 30 24.516369475546433 24.480711142193933 30.6282078121657 20.374711570093933 31 26.062560820463744 24.37235581955503 29.550866037392936 20.01421732258829 32 26.70671135844447 25.289580174886872 27.914723670921894 20.088984795746768 33 26.312169153931276 24.607470765917995 27.14013264900007 21.94022743115066 34 22.608993721832793 24.27918404531139 31.876019425739795 21.235802807116023 35 22.93935092631148 25.89646200317014 29.604928671830606 21.55925839868777 36 27.23836560604213 25.05492533605104 28.336872327062835 19.369836730843996 37 24.299888884032196 26.961610928473984 28.466392595949674 20.272107591544145 38 24.968885228477895 26.808855229467127 26.43547797120187 21.78678157085311 39 23.410731087855233 23.83472017410469 28.752119370296835 24.002429367743243 40 25.685042594454323 23.41326167925444 29.254096682394675 21.64759904389656 41 23.247392915724404 23.077383184450206 28.554963294922025 25.120260604903365 42 24.35418157223343 23.218636195278837 29.62931437076845 22.797867861719283 43 25.002012970431192 23.15100038879086 28.931791359640748 22.9151952811372 44 23.471235227672707 24.00795065806879 28.792838886447765 23.727975227810738 45 21.710863828876807 24.48370184112027 27.782442756872282 26.02299157313064 46 23.736487217062628 25.298322217902324 27.74816474610116 23.217025818933884 47 21.605039097637118 24.73123969071572 31.48124716746303 22.182474044184126 48 23.69553764714814 25.583358830958797 28.624209477754953 22.096894044138114 49 23.794690819244458 23.42798512012257 30.459118295945764 22.318205764687207 50 21.60043802236583 24.793584260641712 29.50738587607924 24.098591840913222 51 21.632875603028427 24.806467271401324 28.040102972064574 25.520554153505675 >>END_MODULE >>Per sequence GC content warn #GC Content Count 0 132.0 1 541.0 2 950.0 3 3784.0 4 6618.0 5 4403.5 6 2189.0 7 2055.5 8 1922.0 9 1897.0 10 1872.0 11 1765.5 12 1659.0 13 1762.0 14 1865.0 15 1718.5 16 1572.0 17 1448.0 18 1324.0 19 1425.0 20 1526.0 21 1642.5 22 1759.0 23 1769.0 24 1779.0 25 2327.5 26 3416.5 27 3957.0 28 4391.0 29 4825.0 30 5842.5 31 6860.0 32 7669.5 33 8479.0 34 9472.0 35 10465.0 36 11172.0 37 11879.0 38 13055.0 39 14231.0 40 16211.0 41 18191.0 42 20088.5 43 21986.0 44 23327.0 45 24668.0 46 26883.5 47 29099.0 48 33699.0 49 38299.0 50 37049.0 51 35799.0 52 35123.0 53 34447.0 54 31760.5 55 29074.0 56 26982.0 57 24890.0 58 23886.5 59 22883.0 60 20615.5 61 18348.0 62 16445.5 63 14543.0 64 12728.0 65 10913.0 66 9415.0 67 7917.0 68 6814.0 69 5711.0 70 4922.5 71 4134.0 72 3256.5 73 2379.0 74 1806.0 75 958.5 76 684.0 77 531.5 78 379.0 79 287.5 80 196.0 81 121.5 82 47.0 83 33.5 84 20.0 85 43.0 86 66.0 87 41.0 88 16.0 89 10.5 90 5.0 91 7.0 92 9.0 93 6.5 94 4.0 95 2.5 96 1.0 97 1.0 98 1.0 99 0.5 100 0.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 44 0.0 45 0.0 46 0.0 47 0.0 48 0.0 49 0.0 50 0.0 51 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 51 434681.0 >>END_MODULE >>Sequence Duplication Levels fail #Total Deduplicated Percentage 33.4192835568809 #Duplication Level Percentage of deduplicated Percentage of total 1 75.30138333421618 25.165182818715557 2 8.996903946001346 6.013401682108793 3 3.566671852713265 3.5758685400051107 4 2.0217443191676145 2.702609867271025 5 1.4380924684804364 2.4030009992581256 6 1.0092785246837153 2.02376191225653 7 0.7671804601900437 1.7947034936872615 8 0.5922783245217783 1.583481381743011 9 0.43923933313504016 1.321115744103766 >10 5.568499602121147 43.86168781147457 >50 0.26431218560247105 5.27618131234365 >100 0.029597458283610035 1.7496026098306579 >500 0.002064938950019305 0.5106649742077387 >1k 0.002753251933359073 2.018736852994196 >5k 0.0 0.0 >10k+ 0.0 0.0 >>END_MODULE >>Overrepresented sequences warn #Sequence Count Percentage Possible Source CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 3799 0.8739742477817065 No Hit GAATGATACCTGTCTCTTATACACATCTGACGCTGGACTGGTCGTATGCCG 1926 0.4430835486253138 No Hit GAATGATACGGCTGTCTCTTATACACATCTGACGCTGGACTGGTCGTATGC 1699 0.39086134429616204 No Hit GAATCTGTCTCTTATACACATCTGACGCTGGACTGGTCGTATGCCGTCTTC 1352 0.3110326883392649 No Hit GCTGTCTCTTATACACATCTGACGCTGGACTGGTCGTATGCCGTCTTCTGC 970 0.22315215065760868 No Hit GGGGTTGGGGATTTAGCTCAGTGGTAGAGCGCTTGCCTAGCAAGCGCAAGG 705 0.16218790331300426 No Hit CCTGTCTCTTATACACATCTGACGCTGGACTGGTCGTATGCCGTCTTCTGC 545 0.12537930114267704 No Hit >>END_MODULE >>Adapter Content fail #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.10352419360404526 0.0 2 0.0 0.0 0.0 0.6066517745197052 0.0 3 0.0 0.0 0.0 0.7640085487978541 0.0 4 0.0 0.0 0.0 1.0587074199240363 0.0 5 0.0 0.0 0.0 1.9849038720348946 0.0 6 0.0 0.0 0.0 2.362882205571442 0.0 7 0.0 0.0 0.0 2.8151679047393374 0.0 8 0.0 0.0 0.0 3.524883765335959 0.0 9 0.0 0.0 0.0 3.7749522063306196 0.0 10 0.0 0.0 0.0 4.815945486460186 0.0 11 0.0 0.0 0.0 5.717986293396767 0.0 12 0.0 0.0 0.0 6.848010380025812 0.0 13 0.0 0.0 0.0 7.164334304927062 0.0 14 0.0 0.0 0.0 7.32215118673234 0.0 15 0.0 0.0 0.0 7.633874036362298 0.0 16 0.0 0.0 0.0 8.116986939847843 0.0 17 0.0 0.0 0.0 8.63667839174015 0.0 18 0.0 0.0 0.0 9.266795650143438 0.0 19 0.0 0.0 0.0 9.65466629551326 0.0 20 0.0 0.0 0.0 10.056110112933393 0.0 21 0.0 0.0 0.0 10.534391887384082 0.0 22 0.0 0.0 0.0 10.999100489784462 0.0 23 0.0 0.0 0.0 11.433902102921452 0.0 24 0.0 0.0 0.0 11.786804576229464 0.0 25 0.0 0.0 0.0 12.12820436135925 0.0 26 0.0 0.0 0.0 12.460401995946453 0.0 27 0.0 0.0 0.0 12.865066566056488 0.0 28 0.0 0.0 0.0 13.215668501728855 0.0 29 0.0 0.0 0.0 13.614811781513339 0.0 30 0.0 0.0 0.0 14.112188018339886 0.0 31 0.0 0.0 0.0 14.512481566942194 0.0 32 0.0 0.0 0.0 14.878957212300515 0.0 33 0.0 0.0 0.0 15.257165599600627 0.0 34 0.0 0.0 0.0 15.675633395524533 0.0 35 0.0 0.0 0.0 16.13712124523501 0.0 36 0.0 0.0 0.0 16.52315146049632 0.0 37 0.0 0.0 0.0 16.91815377253664 0.0 38 0.0 0.0 0.0 17.42473215990577 0.0 39 0.0 0.0 0.0 18.31504022490056 0.0 >>END_MODULE >>Kmer Content warn #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position TTACGTA 20 7.02844E-4 45.000004 1 ACCGTCT 20 7.02844E-4 45.000004 35 CGCGTTT 20 7.02844E-4 45.000004 20 TTGCACG 40 6.7975634E-9 45.000004 1 CGTTTTA 80 0.0 45.000004 1 TAGCTAG 45 3.8380676E-10 45.000004 1 TGTAACG 20 7.02844E-4 45.000004 1 AATGTCG 20 7.02844E-4 45.000004 15 ATCGAAA 20 7.02844E-4 45.000004 17 CTATGAG 25 3.88679E-5 45.0 1 GTTAGAT 25 3.88679E-5 45.0 24 TACGCTC 25 3.88679E-5 45.0 20 TACCTAG 25 3.88679E-5 45.0 25 GCCACGA 25 3.88679E-5 45.0 43 AATCGCT 25 3.88679E-5 45.0 37 CGCATCG 30 2.1623746E-6 44.999996 21 CCGCTAG 30 2.1623746E-6 44.999996 10 CGTTTTT 1755 0.0 42.051285 1 TACGGGT 50 1.0786607E-9 40.5 4 TTCACGG 45 1.9235813E-8 40.000004 2 >>END_MODULE