##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR2936621.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 1086868 Sequences flagged as poor quality 0 Sequence length 51 %GC 47 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 31.12705682750803 31.0 31.0 33.0 28.0 34.0 2 31.16117136579603 31.0 31.0 34.0 28.0 34.0 3 30.982512135788337 31.0 31.0 34.0 28.0 34.0 4 34.95163442110726 35.0 35.0 37.0 32.0 37.0 5 35.15746898427408 35.0 35.0 37.0 33.0 37.0 6 35.10467968511355 36.0 35.0 37.0 32.0 37.0 7 30.99103847017301 35.0 35.0 37.0 0.0 37.0 8 32.994979151102065 35.0 35.0 37.0 17.0 37.0 9 36.20374507299874 39.0 35.0 39.0 32.0 39.0 10 35.97772774614764 37.0 35.0 39.0 32.0 39.0 11 36.25207844926891 37.0 35.0 39.0 32.0 39.0 12 36.346387969836265 38.0 35.0 39.0 32.0 39.0 13 36.27773289856726 38.0 35.0 39.0 32.0 39.0 14 37.24508587979405 39.0 36.0 40.0 32.0 41.0 15 37.433115152898054 39.0 36.0 41.0 32.0 41.0 16 37.41480474169816 39.0 36.0 40.0 32.0 41.0 17 37.29768932381853 39.0 36.0 40.0 32.0 41.0 18 37.24337730064737 39.0 36.0 40.0 32.0 41.0 19 37.098033983887646 39.0 36.0 40.0 32.0 41.0 20 37.06449725265626 39.0 35.0 40.0 31.0 41.0 21 37.10209795485744 39.0 35.0 40.0 32.0 41.0 22 37.2195565606863 39.0 35.0 40.0 32.0 41.0 23 37.30089026450314 39.0 35.0 40.0 32.0 41.0 24 37.22178406209402 39.0 35.0 40.0 32.0 41.0 25 36.91822834051605 39.0 35.0 40.0 31.0 41.0 26 36.889071165955755 39.0 35.0 40.0 31.0 41.0 27 36.93231836800789 39.0 35.0 40.0 31.0 41.0 28 36.91711688999952 39.0 35.0 40.0 31.0 41.0 29 36.88817685312292 39.0 35.0 40.0 31.0 41.0 30 36.67607473952679 39.0 35.0 40.0 31.0 41.0 31 36.66110880070073 39.0 35.0 40.0 31.0 41.0 32 36.554780341310995 39.0 35.0 40.0 30.0 41.0 33 36.4720545641237 39.0 35.0 40.0 30.0 41.0 34 36.3906058509405 39.0 35.0 40.0 30.0 41.0 35 36.352184441900945 39.0 35.0 40.0 30.0 41.0 36 36.30243783053692 39.0 35.0 40.0 30.0 41.0 37 36.2396924005491 39.0 35.0 40.0 30.0 41.0 38 36.06322662917668 38.0 35.0 40.0 29.0 41.0 39 35.988135633766014 38.0 35.0 40.0 29.0 41.0 40 35.89144219905269 38.0 35.0 40.0 29.0 41.0 41 35.72335831030079 38.0 35.0 40.0 28.0 41.0 42 35.794331050320736 38.0 35.0 40.0 29.0 41.0 43 35.80449419800748 38.0 35.0 40.0 29.0 41.0 44 35.63374393210583 38.0 35.0 40.0 28.0 41.0 45 35.562324955744394 38.0 34.0 40.0 28.0 41.0 46 35.47099371772837 38.0 34.0 40.0 28.0 41.0 47 35.40525252376553 38.0 34.0 40.0 28.0 41.0 48 35.3185060191302 38.0 34.0 40.0 27.0 41.0 49 35.23539197032206 38.0 34.0 40.0 27.0 41.0 50 35.076691925790435 38.0 34.0 40.0 26.0 41.0 51 33.41477713945024 36.0 32.0 39.0 22.0 40.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 7 6.0 8 43.0 9 119.0 10 140.0 11 95.0 12 54.0 13 47.0 14 55.0 15 88.0 16 156.0 17 332.0 18 527.0 19 959.0 20 1713.0 21 2661.0 22 3695.0 23 5122.0 24 7083.0 25 9426.0 26 11928.0 27 14027.0 28 16302.0 29 19816.0 30 25023.0 31 31958.0 32 42287.0 33 58070.0 34 85080.0 35 90951.0 36 109538.0 37 162169.0 38 215702.0 39 171691.0 40 5.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 44.73431916295263 21.26974020764251 23.06094208312325 10.934998546281609 2 32.89884328179687 25.65150505857197 24.59682316527858 16.852828494352583 3 33.07770584836429 24.397166905272766 26.157730285554454 16.367396960808488 4 29.236024981874525 25.14058744944188 26.785589418402232 18.83779815028136 5 27.017724323468904 29.60423896922165 24.32126072347332 19.056775983836125 6 26.69974642734904 35.69789523658807 24.52652944055764 13.075828895505252 7 68.39018169639736 17.98148441209052 9.974716340898802 3.653617550613322 8 78.58553200572655 7.835450119057697 8.933927579062038 4.645090296153718 9 72.3613171056651 7.934726204102062 11.193631609358267 8.510325080874587 10 42.2588575613598 24.0076071795287 19.106460030104852 14.62707522900665 11 30.8468921708984 26.342021294214202 24.929154230320517 17.881932304566885 12 27.859776900230752 23.03462794009944 29.441569721438114 19.66402543823169 13 24.760228473006844 24.111391631734488 31.71268268087753 19.41569721438114 14 20.941733494775814 26.856987233040257 30.975518646238548 21.225760625945377 15 20.022210608831983 25.928999657732128 33.99189229970889 20.056897433727002 16 24.450715266251283 25.851621356043236 29.217899505735744 20.479763871969734 17 24.874593786918005 25.567778239859855 28.096880209924297 21.460747763297842 18 24.68662247853465 25.603017109713416 29.544158076233728 20.166202335518204 19 23.911919386714853 27.151319203435925 27.23302185730006 21.70373955254916 20 24.092898125623353 28.00303256697225 29.16738739202921 18.73668191537519 21 24.079097001659814 27.890875432895257 29.74924277833187 18.280784787113063 22 22.840860159651402 24.242226286908807 30.214800693368467 22.702112860071324 23 22.246031716823016 26.521251890753984 30.263748679692476 20.968967712730525 24 23.253053728695665 25.708825726767188 29.31137911871543 21.726741425821718 25 22.747564561657903 27.545847333806865 27.722593728033214 21.98399437650202 26 21.190889786064176 26.4824247286699 28.37741105635643 23.94927442890949 27 22.11124073944582 26.28874895571495 28.98576460066908 22.61424570417015 28 19.637435272728613 26.526956355325577 30.11810081813063 23.71750755381518 29 21.937530592491452 26.05909825296172 28.600437219607166 23.40293393493966 30 22.26185700563454 25.545604434025105 29.983677870725796 22.20886068961456 31 23.30218573000585 26.141076929305125 28.454697350552227 22.102039990136795 32 25.140035404483342 26.845118266431616 26.445253701461446 21.569592627623592 33 23.26326656042868 24.820677395967127 28.069830006955765 23.846226036648424 34 21.572720882388662 26.269335374672913 30.032993887022158 22.124949855916263 35 21.422932683637754 27.24240662159526 27.978650581303345 23.35601011346364 36 22.617557973921397 27.24305067404689 27.21278020882021 22.926611143211503 37 21.96770905022505 27.225937280332108 28.314293916096528 22.492059753346314 38 21.794642955722317 26.780160976309908 29.020451425564097 22.404744642403678 39 22.703676987453857 26.466507432365294 27.615036968610724 23.214778611570125 40 22.810497686931626 25.567134187408225 29.8695885792939 21.752779546366256 41 19.77250227258508 26.87060434201761 27.73299057475241 25.6239028106449 42 20.224903116109775 26.55584670815591 29.708483458892893 23.51076671684142 43 21.722601088632658 24.567472774982797 28.67339916162772 25.036526974756825 44 22.01067654949819 24.925657945583087 28.918231100740844 24.145434404177877 45 21.13826150001656 24.769613237302046 28.27638682894335 25.815738433738044 46 22.725666778302426 26.420503685820172 28.126966660164804 22.726862875712598 47 20.275507237309405 25.344108024157485 31.293956579823863 23.086428158709246 48 20.494485070864172 26.940622044259282 28.899369564657345 23.665523320219197 49 21.353835056326986 24.88048226647578 30.772826138960756 22.992856538236474 50 21.207543142313508 24.932926537537217 30.03649017175959 23.823040148389683 51 20.508746232293156 24.962184920339915 28.05556884552678 26.47350000184015 >>END_MODULE >>Per sequence GC content warn #GC Content Count 0 337.0 1 920.0 2 1503.0 3 3908.0 4 6313.0 5 4323.5 6 2334.0 7 2196.0 8 2058.0 9 2070.5 10 2083.0 11 2045.0 12 2007.0 13 2010.5 14 2014.0 15 2145.5 16 2277.0 17 2281.0 18 2285.0 19 2340.5 20 2396.0 21 3256.0 22 4116.0 23 4702.0 24 5288.0 25 7018.0 26 9950.5 27 11153.0 28 13746.5 29 16340.0 30 19528.5 31 22717.0 32 25744.0 33 28771.0 34 33159.5 35 37548.0 36 38661.0 37 39774.0 38 43407.0 39 47040.0 40 49655.0 41 52270.0 42 56439.0 43 60608.0 44 66746.0 45 72884.0 46 90281.5 47 107679.0 48 98195.0 49 88711.0 50 86522.0 51 84333.0 52 76751.5 53 69170.0 54 63941.5 55 58713.0 56 55538.5 57 52364.0 58 50155.5 59 47947.0 60 44615.5 61 41284.0 62 37188.5 63 33093.0 64 28234.5 65 23376.0 66 19948.5 67 16521.0 68 14355.0 69 12189.0 70 9931.5 71 7674.0 72 6060.0 73 4446.0 74 3706.0 75 2399.0 76 1832.0 77 1313.0 78 794.0 79 569.0 80 344.0 81 289.0 82 234.0 83 196.5 84 159.0 85 115.0 86 71.0 87 59.0 88 47.0 89 40.0 90 33.0 91 25.0 92 17.0 93 12.0 94 7.0 95 3.5 96 0.0 97 0.0 98 0.0 99 0.0 100 0.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 44 0.0 45 0.0 46 0.0 47 0.0 48 0.0 49 0.0 50 0.0 51 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 51 1086868.0 >>END_MODULE >>Sequence Duplication Levels fail #Total Deduplicated Percentage 30.21671221123493 #Duplication Level Percentage of deduplicated Percentage of total 1 73.15240877220205 22.104252834282466 2 9.285558695566207 5.611581096489081 3 3.9334211091218463 3.56565160979794 4 2.3691193259921537 2.863479874703191 5 1.6059226151421597 2.4262850747632214 6 1.1542619752411745 2.0926801153340486 7 0.8556246176851818 1.8097913983408738 8 0.6570310370692966 1.5882654208777727 9 0.5201129609769459 1.4144493293256277 >10 6.020116615725724 43.95050224141722 >50 0.4076292310794117 7.363180787861323 >100 0.032824883552250876 1.6912115707901916 >500 0.0029840803227665167 0.6085512311193246 >1k 0.0020888562259365616 1.1516396983043435 >5k 8.952240968299549E-4 1.7584777165934313 >10k+ 0.0 0.0 >>END_MODULE >>Overrepresented sequences warn #Sequence Count Percentage Possible Source GAATGATACCTGTCTCTTATACACATCTGACGCCCTGTAACTCGTATGCCG 6569 0.6043972221097687 No Hit GAATCTGTCTCTTATACACATCTGACGCCCTGTAACTCGTATGCCGTCTTC 6563 0.6038451771512272 Illumina PCR Primer Index 2 (95% over 21bp) GAATGATACGGCTGTCTCTTATACACATCTGACGCCCTGTAACTCGTATGC 6370 0.5860877309848114 No Hit CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 3640 0.33490727484846367 No Hit GCTGTCTCTTATACACATCTGACGCCCTGTAACTCGTATGCCGTCTTCTGC 2770 0.25486075585995727 Illumina PCR Primer Index 2 (95% over 24bp) GAACTGTCTCTTATACACATCTGACGCCCTGTAACTCGTATGCCGTCTTCT 1386 0.12752238542306887 Illumina PCR Primer Index 2 (95% over 22bp) GATACTGAAGCTACGAATATACTGACTATGAAGACCTATGCTTTGATTCAT 1373 0.12632628801289578 No Hit GAATGCTGTCTCTTATACACATCTGACGCCCTGTAACTCGTATGCCGTCTT 1307 0.1202537934689401 No Hit GAATGACTGTCTCTTATACACATCTGACGCCCTGTAACTCGTATGCCGTCT 1283 0.11804561363477442 No Hit >>END_MODULE >>Adapter Content fail #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 1.8401498618047453E-4 0.0 0.0 0.0784823916059724 0.0 2 1.8401498618047453E-4 0.0 0.0 0.5555412432788527 0.0 3 1.8401498618047453E-4 0.0 0.0 0.7129660639562486 0.0 4 1.8401498618047453E-4 0.0 0.0 1.0623185152198795 0.0 5 1.8401498618047453E-4 0.0 0.0 2.2570358129966106 0.0 6 1.8401498618047453E-4 0.0 0.0 2.7984079023395667 0.0 7 1.8401498618047453E-4 0.0 0.0 3.2781349713120638 0.0 8 1.8401498618047453E-4 0.0 0.0 3.996529477360636 0.0 9 1.8401498618047453E-4 0.0 0.0 4.225168097689876 0.0 10 1.8401498618047453E-4 0.0 0.0 5.385566600543949 0.0 11 1.8401498618047453E-4 0.0 0.0 6.115738065708071 0.0 12 1.8401498618047453E-4 0.0 0.0 7.345878248324544 0.0 13 1.8401498618047453E-4 0.0 0.0 7.64297044351292 0.0 14 1.8401498618047453E-4 0.0 0.0 7.798739129314692 0.0 15 1.8401498618047453E-4 0.0 0.0 8.100063669185218 0.0 16 1.8401498618047453E-4 0.0 0.0 8.53535111899513 0.0 17 1.8401498618047453E-4 0.0 0.0 8.989592112381633 0.0 18 1.8401498618047453E-4 0.0 0.0 9.499957676553178 0.0 19 1.8401498618047453E-4 0.0 0.0 9.8456298280932 0.0 20 1.8401498618047453E-4 0.0 0.0 10.185689522554718 0.0 21 1.8401498618047453E-4 0.0 0.0 10.598987181516062 0.0 22 1.8401498618047453E-4 0.0 0.0 11.022497672210426 0.0 23 1.8401498618047453E-4 0.0 0.0 11.432759083899793 0.0 24 1.8401498618047453E-4 0.0 0.0 11.79204834441717 0.0 25 1.8401498618047453E-4 0.0 0.0 12.119871042297685 0.0 26 1.8401498618047453E-4 0.0 0.0 12.445117530371673 0.0 27 1.8401498618047453E-4 0.0 0.0 12.789501577008432 0.0 28 1.8401498618047453E-4 0.0 0.0 13.100946941118885 0.0 29 1.8401498618047453E-4 0.0 0.0 13.443398830400747 0.0 30 1.8401498618047453E-4 0.0 0.0 13.87132568076344 0.0 31 1.8401498618047453E-4 0.0 0.0 14.229418843870645 0.0 32 1.8401498618047453E-4 0.0 0.0 14.569846568304524 0.0 33 2.7602247927071183E-4 0.0 0.0 14.918462959623431 0.0 34 2.7602247927071183E-4 0.0 0.0 15.284284752150215 0.0 35 2.7602247927071183E-4 0.0 0.0 15.66666789343324 0.0 36 2.7602247927071183E-4 0.0 0.0 16.02411700408881 0.0 37 2.7602247927071183E-4 0.0 0.0 16.388374669233063 0.0 38 2.7602247927071183E-4 0.0 0.0 16.804156530507843 0.0 39 2.7602247927071183E-4 0.0 0.0 17.42575915382549 0.0 >>END_MODULE >>Kmer Content warn #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position TGATCGA 25 3.8906655E-5 45.0 1 GCTATCG 20 7.033117E-4 45.0 1 CCAATCG 20 7.033117E-4 45.0 12 TAACGTA 20 7.033117E-4 45.0 11 TTACGCG 25 3.8906655E-5 45.0 1 GCTACGC 20 7.033117E-4 45.0 29 CGACTAG 20 7.033117E-4 45.0 2 TAATGCG 20 7.033117E-4 45.0 1 ATCGCGA 20 7.033117E-4 45.0 1 CGGACTA 20 7.033117E-4 45.0 6 CGAACTC 30 2.1653923E-6 44.999996 21 TTAGACG 55 6.184564E-11 40.909092 1 CGGTCTA 55 6.184564E-11 40.909092 31 TACGGCT 800 0.0 39.9375 7 CGAATAT 260 0.0 39.80769 14 CGTTTTT 1725 0.0 38.347828 1 CTACGAA 275 0.0 37.636364 11 GCTACGA 275 0.0 37.636364 10 TTTACGG 90 0.0 37.500004 2 GACGGTC 60 1.5643309E-10 37.499996 29 >>END_MODULE