##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR2936620.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 159070 Sequences flagged as poor quality 0 Sequence length 51 %GC 45 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 31.000050292324133 31.0 31.0 33.0 28.0 34.0 2 31.067919783743005 31.0 31.0 34.0 28.0 34.0 3 30.769334255359276 31.0 30.0 34.0 27.0 34.0 4 34.71741371723141 35.0 35.0 37.0 32.0 37.0 5 35.04025271892878 35.0 35.0 37.0 32.0 37.0 6 35.051926824668385 35.0 35.0 37.0 32.0 37.0 7 31.023649965424028 35.0 35.0 37.0 0.0 37.0 8 33.0991010247061 35.0 35.0 37.0 17.0 37.0 9 36.307229521594266 39.0 35.0 39.0 32.0 39.0 10 36.09092223549381 37.0 35.0 39.0 32.0 39.0 11 36.29372603256428 37.0 35.0 39.0 32.0 39.0 12 36.2322688124725 37.0 35.0 39.0 32.0 39.0 13 35.90917206261394 38.0 35.0 39.0 31.0 39.0 14 36.93207392971647 39.0 35.0 40.0 31.0 41.0 15 37.255736468221535 39.0 35.0 40.0 32.0 41.0 16 37.22752247438235 39.0 35.0 40.0 32.0 41.0 17 37.21716225561074 39.0 35.0 40.0 32.0 41.0 18 37.079612749104164 39.0 35.0 40.0 32.0 41.0 19 36.810498522662975 38.0 35.0 40.0 32.0 41.0 20 36.72873577670208 38.0 35.0 40.0 32.0 41.0 21 36.672125479348715 38.0 35.0 40.0 31.0 41.0 22 36.737379769912614 38.0 35.0 40.0 32.0 41.0 23 36.88756522285786 38.0 35.0 40.0 32.0 41.0 24 36.81365436600239 38.0 35.0 40.0 32.0 41.0 25 36.486087885836426 38.0 35.0 40.0 31.0 41.0 26 36.499509649839695 38.0 35.0 40.0 31.0 41.0 27 36.484145344816746 38.0 35.0 40.0 31.0 41.0 28 36.507330106242534 38.0 35.0 40.0 31.0 41.0 29 36.51886590809078 38.0 35.0 40.0 31.0 41.0 30 36.27868234110769 38.0 35.0 40.0 31.0 41.0 31 36.17261582950902 38.0 35.0 40.0 30.0 41.0 32 35.88988495630854 38.0 35.0 40.0 30.0 41.0 33 35.608449110454515 38.0 35.0 40.0 29.0 41.0 34 35.45559816433017 38.0 35.0 40.0 27.0 41.0 35 35.292915068837615 38.0 34.0 40.0 26.0 41.0 36 35.168152385742125 38.0 34.0 40.0 25.0 41.0 37 35.0711824982712 38.0 34.0 40.0 25.0 41.0 38 34.91826240020117 38.0 34.0 40.0 25.0 41.0 39 34.884308794870186 38.0 34.0 40.0 24.0 41.0 40 34.76028163701515 38.0 34.0 40.0 24.0 41.0 41 34.571653988809956 38.0 34.0 40.0 23.0 41.0 42 34.62261268623876 38.0 34.0 40.0 23.0 41.0 43 34.494970767586594 37.0 34.0 40.0 23.0 41.0 44 34.2792858489973 37.0 33.0 40.0 23.0 41.0 45 34.20635569246244 37.0 33.0 40.0 23.0 41.0 46 34.12859747281071 37.0 33.0 40.0 22.0 41.0 47 34.058628276859245 37.0 33.0 40.0 22.0 41.0 48 33.99029358144213 37.0 33.0 40.0 22.0 41.0 49 33.82788709373232 37.0 33.0 40.0 20.0 41.0 50 33.63323693971208 36.0 33.0 40.0 20.0 41.0 51 31.91024706104231 35.0 30.0 39.0 15.0 40.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 7 1.0 8 1.0 9 9.0 10 16.0 11 12.0 12 8.0 13 3.0 14 8.0 15 7.0 16 26.0 17 37.0 18 104.0 19 149.0 20 309.0 21 462.0 22 726.0 23 1065.0 24 1492.0 25 2262.0 26 2850.0 27 3227.0 28 3303.0 29 3582.0 30 4172.0 31 5089.0 32 6670.0 33 9222.0 34 14792.0 35 15608.0 36 14433.0 37 20858.0 38 27596.0 39 20970.0 40 1.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 38.52832086502798 19.8290060979443 24.76519771169925 16.877475325328472 2 34.31633871880304 23.799585088325895 25.020431256679448 16.863644936191612 3 29.28019111083171 22.239265732067643 32.45363676368894 16.026906393411704 4 27.475953982523414 24.52379455585591 30.803419878041115 17.196831583579556 5 24.875840824794114 28.13289746652417 29.74790972527818 17.24335198340353 6 24.546426101716225 31.26359464386748 29.532910039605202 14.657069214811088 7 65.17570880744327 17.596655560445086 13.22939586345634 3.9982397686553086 8 74.96322373797699 5.146162067014521 14.042245552272584 5.8483686427359025 9 70.34701703652479 6.471364807946187 16.45753441880933 6.724083736719683 10 42.25875400766958 22.276356321116488 22.767963789526625 12.696925881687307 11 32.24932419689445 23.885710693405418 27.763877538190734 16.1010875715094 12 29.789400892688754 21.696737285471805 31.626328031684164 16.887533790155278 13 22.74784685987301 28.264914817375995 31.481108945747156 17.506129377003834 14 16.43175960269064 32.09216068397561 32.56616583893883 18.90991387439492 15 15.35676117432577 25.744640724209468 42.51964543911485 16.378952662349906 16 16.75551643930345 23.90959954736908 40.099327340164706 19.23555667316276 17 18.547180486578235 22.554850066008676 32.51901678506318 26.37895266234991 18 20.89457471553404 23.56949770541271 35.22537247752562 20.31055510152763 19 22.407745017916643 26.984975168164958 31.03476456905765 19.572515244860753 20 26.394669013641792 25.798704972653546 30.237002577481615 17.569623436223047 21 22.163198591814925 26.367636889419753 32.28955805620167 19.17960646256365 22 18.753379015527756 24.93179103539322 31.30822908153643 25.006600867542588 23 18.29068963349469 26.073426793235683 32.104733765009115 23.531149808260515 24 20.736782548563525 23.136355063808388 35.0141447161627 21.112717671465393 25 17.394857609857294 25.698120324385492 32.819513421764 24.08750864399321 26 17.679637895266236 29.051361036021877 31.486138178160562 21.78286289055133 27 18.557867605456718 27.760105613880683 32.47815427170428 21.20387250895832 28 15.617652605771044 26.014961966429873 36.83724146602125 21.530143961777835 29 17.919783743006224 25.174451499339913 34.696674420066635 22.209090337587227 30 18.706229961652102 24.770226944112654 34.01961400641227 22.50392908782297 31 21.24473502231722 25.9684415666059 30.04463443766895 22.742188973407934 32 22.57559564971396 27.240208713145158 29.318539007983908 20.865656629156977 33 21.920538127868234 25.98478657194946 30.670773873137612 21.423901427044697 34 17.862576224303766 26.664361601810523 31.821210787703524 23.651851386182184 35 20.89897529389577 24.36411642673037 30.06475136732256 24.6721569120513 36 21.252907524989 24.265417740617337 31.67724900986987 22.804425724523796 37 18.842647890865656 27.56899478217137 32.518388131011505 21.06996919595147 38 20.03646193499717 28.389388319607722 28.55661029735337 23.01753944804174 39 19.453070975042433 24.983969321682277 32.80191110831709 22.761048594958194 40 22.991764631923054 23.85427799082165 31.56723455082668 21.586722826428616 41 18.151757088074433 24.41315144276105 31.124662098447224 26.31042937071729 42 21.516313572640975 23.837304331426417 29.677500471490536 24.96888162444207 43 22.943986923995723 25.12038725089583 28.888539636637955 23.047086188470484 44 19.70578990381593 26.578864650782673 29.906959200352045 23.80838624504935 45 18.957062928270574 27.01326460049035 28.753379015527752 25.276293455711325 46 21.478594329540453 26.196642987364054 29.41660904004526 22.90815364305023 47 18.474256616583894 25.458603130697178 31.72125479348714 24.345885459231784 48 19.870497265354874 22.781165524611808 33.059030615452315 24.289306594581003 49 18.880995788017856 23.21430816621613 34.720563274030305 23.18413277173571 50 18.233482114792228 25.12730244546426 32.57873891997234 24.06047651977117 51 17.8386873703401 24.933676997548247 29.431696737285474 27.79593889482618 >>END_MODULE >>Per sequence GC content fail #GC Content Count 0 111.0 1 171.0 2 231.0 3 1807.0 4 3383.0 5 2288.5 6 1194.0 7 1116.0 8 1038.0 9 1010.0 10 982.0 11 981.5 12 981.0 13 944.0 14 907.0 15 831.5 16 756.0 17 786.0 18 816.0 19 718.5 20 621.0 21 702.0 22 783.0 23 844.5 24 906.0 25 1021.5 26 1231.5 27 1326.0 28 1526.5 29 1727.0 30 2024.0 31 2321.0 32 2570.5 33 2820.0 34 3368.5 35 3917.0 36 4505.5 37 5094.0 38 5786.0 39 6478.0 40 6991.5 41 7505.0 42 9504.0 43 11503.0 44 12547.0 45 13591.0 46 15081.0 47 16571.0 48 16496.5 49 16422.0 50 15276.5 51 14131.0 52 11943.0 53 9755.0 54 8666.0 55 7577.0 56 6553.0 57 5529.0 58 5297.0 59 5065.0 60 4830.0 61 4595.0 62 4337.5 63 4080.0 64 3129.5 65 2179.0 66 1618.0 67 1057.0 68 887.0 69 717.0 70 589.0 71 461.0 72 407.0 73 353.0 74 261.5 75 136.0 76 102.0 77 89.5 78 77.0 79 59.5 80 42.0 81 37.0 82 32.0 83 23.5 84 15.0 85 9.0 86 3.0 87 4.0 88 5.0 89 3.5 90 2.0 91 2.0 92 2.0 93 1.0 94 0.0 95 0.0 96 0.0 97 0.0 98 0.0 99 0.0 100 0.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 44 0.0 45 0.0 46 0.0 47 0.0 48 0.0 49 0.0 50 0.0 51 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 51 159070.0 >>END_MODULE >>Sequence Duplication Levels fail #Total Deduplicated Percentage 39.66429873640536 #Duplication Level Percentage of deduplicated Percentage of total 1 77.44634989063937 30.71855158106494 2 8.932703585126953 7.086188470484692 3 3.4107839097220016 4.058590557616144 4 1.9241132278822075 3.0527440749355628 5 1.1887025707674264 2.3574526937826112 6 0.7369955938758044 1.753944804174263 7 0.6006910324278062 1.6678191990947382 8 0.4659714077408311 1.4785943295404538 9 0.35502583446920466 1.267366568177532 >10 4.832472184359844 40.832966618469854 >50 0.07449202776809205 1.7916640472747845 >100 0.028528861698418236 2.309674985855284 >500 0.0015849367610232352 0.40925378764066134 >1k 0.0015849367610232352 1.215188281888477 >5k 0.0 0.0 >10k+ 0.0 0.0 >>END_MODULE >>Overrepresented sequences fail #Sequence Count Percentage Possible Source CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 1933 1.215188281888477 No Hit GCTGTCTCTTATACACATCTGACGCCCTATCGTTCGTATGCCGTCTTCTGC 651 0.40925378764066134 No Hit CCTGTCTCTTATACACATCTGACGCCCTATCGTTCGTATGCCGTCTTCTGC 411 0.2583768152385742 No Hit GGGGGAGGGCTTATTAATACACCTAATCGGAGGAGCTACTCTAGTATTAAT 401 0.2520902747218206 No Hit CTGTCTCTTATACACATCTGACGCCCTATCGTTCGTATGCCGTCTTCTGCT 330 0.20745583705286982 Illumina Single End Adapter 1 (95% over 21bp) GAATCTGTCTCTTATACACATCTGACGCCCTATCGTTCGTATGCCGTCTTC 310 0.19488275601936253 No Hit GAATGATACCTGTCTCTTATACACATCTGACGCCCTATCGTTCGTATGCCG 299 0.18796756145093355 No Hit GAATGATACGGCTGTCTCTTATACACATCTGACGCCCTATCGTTCGTATGC 293 0.18419563714088136 No Hit TCTGTCTCTTATACACATCTGACGCCCTATCGTTCGTATGCCGTCTTCTGC 280 0.17602313446910164 No Hit ACTGTCTCTTATACACATCTGACGCCCTATCGTTCGTATGCCGTCTTCTGC 177 0.11127176714653926 No Hit >>END_MODULE >>Adapter Content fail #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.2596341233419249 0.0 2 0.0 0.0 0.0 1.4402464323882567 0.0 3 0.0 0.0 0.0 1.8539007983906457 0.0 4 0.0 0.0 0.0 2.4699817690325014 0.0 5 0.0 0.0 0.0 3.9611491796064624 0.0 6 0.0 0.0 0.0 4.707990192996794 0.0 7 0.0 0.0 0.0 5.536556233104922 0.0 8 0.0 0.0 0.0 6.853586471364808 0.0 9 0.0 0.0 0.0 7.302445464261017 0.0 10 0.0 0.0 0.0 8.400075438486201 0.0 11 0.0 0.0 0.0 9.820204941220846 0.0 12 0.0 0.0 0.0 11.122147482240523 0.0 13 0.0 0.0 0.0 11.823725403910228 0.0 14 0.0 0.0 0.0 12.091532029923933 0.0 15 0.0 0.0 0.0 12.46620984472245 0.0 16 0.0 0.0 0.0 13.249512793109952 0.0 17 0.0 0.0 0.0 14.14031558433394 0.0 18 0.0 0.0 0.0 15.258062488212737 0.0 19 0.0 0.0 0.0 15.85151191299428 0.0 20 0.0 0.0 0.0 16.428616332432263 0.0 21 0.0 0.0 0.0 17.126422329791914 0.0 22 0.0 0.0 0.0 17.831772175771672 0.0 23 0.0 0.0 0.0 18.507575281322687 0.0 24 0.0 0.0 0.0 19.071477965675488 0.0 25 0.0 0.0 0.0 19.491418872194632 0.0 26 0.0 0.0 0.0 19.87929842207833 0.0 27 0.0 0.0 0.0 20.29546740428742 0.0 28 0.0 0.0 0.0 20.674545797447664 0.0 29 0.0 0.0 0.0 21.15106556861759 0.0 30 0.0 0.0 0.0 21.66593323693971 0.0 31 0.0 0.0 0.0 22.12862261897278 0.0 32 0.0 0.0 0.0 22.583139498334067 0.0 33 0.0 0.0 0.0 22.998679826491482 0.0 34 0.0 0.0 0.0 23.429307851889106 0.0 35 0.0 0.0 0.0 23.871251650216884 0.0 36 0.0 0.0 0.0 24.318853335009745 0.0 37 0.0 0.0 0.0 24.711762117306847 0.0 38 0.0 0.0 0.0 25.101527629345572 0.0 39 0.0 0.0 0.0 25.535298925001573 0.0 >>END_MODULE >>Kmer Content fail #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position TAATACA 80 0.0 45.0 15 CGAACTT 20 7.0149486E-4 45.0 27 GTTCTCG 20 7.0149486E-4 45.0 43 CGAAAGG 20 7.0149486E-4 45.0 2 ACGTTGT 20 7.0149486E-4 45.0 38 TTAGCGG 20 7.0149486E-4 45.0 2 GCGAAAG 20 7.0149486E-4 45.0 1 CTTTTCG 25 3.875613E-5 45.0 12 CTTTTCA 20 7.0149486E-4 45.0 11 AGCCACT 25 3.875613E-5 45.0 36 GGCCGGT 20 7.0149486E-4 45.0 9 GCACGTT 20 7.0149486E-4 45.0 36 AAGACCC 20 7.0149486E-4 45.0 21 ACCGACT 20 7.0149486E-4 45.0 41 TCTAGTA 75 0.0 45.0 40 CGACAAT 20 7.0149486E-4 45.0 20 TATTGGG 45 3.8016879E-10 45.0 3 AAACGAC 20 7.0149486E-4 45.0 37 TCGGAGG 80 0.0 45.0 27 CCCCGCA 20 7.0149486E-4 45.0 25 >>END_MODULE