##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR2936618.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 809725 Sequences flagged as poor quality 0 Sequence length 51 %GC 46 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 31.17198184568835 31.0 31.0 33.0 28.0 34.0 2 31.218607551946647 31.0 31.0 34.0 28.0 34.0 3 30.97816913149526 31.0 31.0 34.0 28.0 34.0 4 34.96309117292908 35.0 35.0 37.0 32.0 37.0 5 35.203802525548795 35.0 35.0 37.0 33.0 37.0 6 35.19181450492451 36.0 35.0 37.0 33.0 37.0 7 31.34831578622372 35.0 35.0 37.0 0.0 37.0 8 33.25875945537065 36.0 35.0 37.0 17.0 37.0 9 36.55224057550403 39.0 35.0 39.0 32.0 39.0 10 36.1406366358949 37.0 35.0 39.0 32.0 39.0 11 36.40028775201457 38.0 35.0 39.0 32.0 39.0 12 36.56411127234555 38.0 35.0 39.0 32.0 39.0 13 36.58503936521659 39.0 35.0 39.0 32.0 39.0 14 37.68529562505789 39.0 37.0 41.0 33.0 41.0 15 37.849543980981196 39.0 37.0 41.0 33.0 41.0 16 37.75751150081818 39.0 37.0 41.0 33.0 41.0 17 37.64236994041187 39.0 36.0 41.0 33.0 41.0 18 37.57794312884004 39.0 36.0 40.0 33.0 41.0 19 37.3895816480904 39.0 36.0 40.0 32.0 41.0 20 37.39833029732316 39.0 36.0 40.0 32.0 41.0 21 37.415049553860875 39.0 36.0 40.0 32.0 41.0 22 37.49301059001513 39.0 36.0 40.0 33.0 41.0 23 37.53498533452716 39.0 36.0 40.0 33.0 41.0 24 37.4843249251289 39.0 36.0 41.0 33.0 41.0 25 37.17446540492142 39.0 35.0 40.0 32.0 41.0 26 37.16391490938282 39.0 35.0 40.0 32.0 41.0 27 37.22090462811448 39.0 35.0 40.0 32.0 41.0 28 37.23039426965945 39.0 36.0 40.0 32.0 41.0 29 37.218444533637964 39.0 36.0 41.0 32.0 41.0 30 37.014390070703016 39.0 35.0 40.0 31.0 41.0 31 36.99270246071197 39.0 35.0 40.0 31.0 41.0 32 36.83384235388558 39.0 35.0 40.0 31.0 41.0 33 36.70922720676773 39.0 35.0 40.0 31.0 41.0 34 36.60810028095958 39.0 35.0 40.0 30.0 41.0 35 36.55120195127976 39.0 35.0 40.0 30.0 41.0 36 36.464098304980084 39.0 35.0 40.0 30.0 41.0 37 36.403252956250576 39.0 35.0 40.0 30.0 41.0 38 36.27676927351879 39.0 35.0 40.0 30.0 41.0 39 36.225448145975484 39.0 35.0 40.0 30.0 41.0 40 36.14348328136096 39.0 35.0 40.0 29.0 41.0 41 35.9802661397388 39.0 35.0 40.0 28.0 41.0 42 36.01964741115811 39.0 35.0 40.0 29.0 41.0 43 35.96251319892556 39.0 35.0 40.0 28.0 41.0 44 35.778464293432954 38.0 35.0 40.0 28.0 41.0 45 35.69074685850134 38.0 35.0 40.0 28.0 41.0 46 35.56808422612615 38.0 35.0 40.0 27.0 41.0 47 35.51040167958257 38.0 34.0 40.0 27.0 41.0 48 35.435693599678906 38.0 34.0 40.0 27.0 41.0 49 35.31909228441755 38.0 34.0 40.0 27.0 41.0 50 35.178032047917505 38.0 34.0 40.0 26.0 41.0 51 33.48662076630955 36.0 32.0 39.0 22.0 40.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 7 2.0 8 39.0 9 54.0 10 73.0 11 43.0 12 31.0 13 21.0 14 25.0 15 46.0 16 88.0 17 165.0 18 322.0 19 548.0 20 1043.0 21 1652.0 22 2465.0 23 3570.0 24 5072.0 25 7030.0 26 8942.0 27 10181.0 28 11438.0 29 13349.0 30 16594.0 31 21275.0 32 27430.0 33 37545.0 34 56707.0 35 65351.0 36 81831.0 37 126378.0 38 173161.0 39 137248.0 40 6.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 41.61721572138689 21.550773410725863 25.50322640402606 11.328784463861187 2 32.09003056593288 24.570687579116367 26.758961375775726 16.58032047917503 3 32.192411003735835 24.689863842662632 27.905646978912596 15.212078174688937 4 28.381981536941552 25.996974281391832 27.450677699218872 18.170366482447744 5 26.832196115965296 30.381796288863505 24.90561610423292 17.880391490938283 6 26.093920775571956 35.7362067368551 24.79236777918429 13.377504708388651 7 71.0201611658279 17.119762882460094 8.600697767760659 3.259378183951341 8 83.19589984253913 6.210380067306802 7.483404859674581 3.110315230479484 9 77.25684646021797 8.034085646361419 8.956868072493748 5.752199820926858 10 38.259903053505816 32.48497946833802 16.969094445645126 12.286023032511038 11 28.341844453363795 27.625428386180495 26.643366575071788 17.389360585383926 12 26.42662632375189 24.23143659884529 29.843218376609343 19.49871870079348 13 24.392602426749825 25.568063231343974 31.19342986816512 18.845904473741086 14 20.995399672728396 28.469048133625613 29.615610238043782 20.919941955602212 15 20.432986507764983 28.027540214270275 32.93994874803174 18.599524529933 16 23.266170613479886 27.692982185309827 29.71675568865973 19.324091512550556 17 23.52959338046868 26.76451881811726 28.807187625428387 20.898700175985674 18 23.505881626478125 26.718453796041864 29.86655963444379 19.909104943036215 19 23.014603723486367 28.75173670073173 28.070764765815554 20.162894809966346 20 25.0115780048782 27.690635709654508 29.133100744079783 18.164685541387506 21 24.05927938497638 28.145234493192135 29.61091728673315 18.184568835098336 22 23.611720028404708 25.43493161258452 29.144215628762854 21.809132730247924 23 22.10565315384853 27.64000123498719 29.73688597980796 20.517459631356324 24 21.969557565840255 26.548149062953474 30.351292105344406 21.13100126586187 25 21.350334990274476 29.30068850535676 28.78890981506067 20.560066689308098 26 21.882984964031 28.753836178949644 28.699249745283893 20.663929111735467 27 21.68563401154713 29.11321745036895 28.47003612337522 20.731112414708697 28 20.106085399363984 28.36913767019667 30.68115718299423 20.843619747445118 29 22.534317206458983 26.83763005958813 29.558059835129207 21.069992898823674 30 22.743153539782025 27.666182963351755 28.732717898051806 20.85794559881441 31 22.726975207632222 27.85340702090216 27.732378276575382 21.68723949489024 32 23.24357034795764 29.0425761832721 27.3460742844793 20.367779184290963 33 23.093642903454878 28.282935564543514 27.436969341443085 21.186452190558523 34 22.41365895828831 28.495847355583688 27.719534409830498 21.37095927629751 35 21.983636419772147 27.70125659946278 28.323566642996077 21.991540337768996 36 23.173917070610393 28.02222976936614 27.863286918398224 20.940566241625245 37 22.356602550248542 28.902158140109297 28.411497730711044 20.329741578931117 38 21.561888295408934 28.628978974343138 27.31087714964957 22.49825558059835 39 22.507023989626106 28.284047053011825 28.013831856494487 21.19509710086758 40 23.203803760535983 26.85627836611195 28.957362067368553 20.982555805983512 41 21.33094569143845 27.780789774306093 28.576986013770107 22.31127852048535 42 21.693908425700084 26.8020624286023 28.73457037883232 22.769458766865295 43 22.5682793541017 27.05955725709346 28.458303745098647 21.913859643706196 44 22.49158664978851 27.651363117107657 27.74213467535274 22.11491555775109 45 22.153447157985738 27.643335700392107 26.866281762326714 23.33693537929544 46 22.778968168205253 28.715304578714996 26.7086973972645 21.797029855815246 47 21.529161134953227 27.301985241903115 29.100250084905372 22.06860353823829 48 21.88483744481151 26.638426626323753 28.78001790731421 22.696718021550527 49 21.208064466331162 26.38982370557905 30.010559140448915 22.391552687640864 50 21.35848590570873 26.843064003210966 28.98823674704375 22.810213344036555 51 21.400969464941802 25.786285467288277 28.11720028404705 24.69554478372287 >>END_MODULE >>Per sequence GC content warn #GC Content Count 0 130.0 1 513.5 2 897.0 3 3598.5 4 6300.0 5 4439.0 6 2578.0 7 2395.0 8 2212.0 9 2249.5 10 2287.0 11 2199.5 12 2112.0 13 2100.5 14 2089.0 15 1997.5 16 1906.0 17 1923.0 18 1940.0 19 2019.0 20 2098.0 21 2510.5 22 2923.0 23 3589.5 24 4256.0 25 5170.5 26 7337.5 27 8590.0 28 10192.0 29 11794.0 30 13925.5 31 16057.0 32 19979.5 33 23902.0 34 26157.0 35 28412.0 36 30506.5 37 32601.0 38 36093.0 39 39585.0 40 42768.5 41 45952.0 42 49087.0 43 52222.0 44 53945.0 45 55668.0 46 57710.0 47 59752.0 48 68229.5 49 76707.0 50 72273.5 51 67840.0 52 65101.0 53 62362.0 54 55089.5 55 47817.0 56 42853.5 57 37890.0 58 34937.5 59 31985.0 60 28965.0 61 25945.0 62 21963.0 63 17981.0 64 14760.5 65 11540.0 66 8898.5 67 6257.0 68 5237.0 69 4217.0 70 3535.5 71 2854.0 72 2290.0 73 1726.0 74 1383.0 75 813.5 76 587.0 77 458.0 78 329.0 79 223.0 80 117.0 81 104.0 82 91.0 83 64.0 84 37.0 85 30.0 86 23.0 87 17.5 88 12.0 89 8.0 90 4.0 91 4.5 92 5.0 93 3.5 94 2.0 95 4.0 96 6.0 97 4.5 98 3.0 99 1.5 100 0.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 44 0.0 45 0.0 46 0.0 47 0.0 48 0.0 49 0.0 50 0.0 51 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 51 809725.0 >>END_MODULE >>Sequence Duplication Levels fail #Total Deduplicated Percentage 32.049129565912324 #Duplication Level Percentage of deduplicated Percentage of total 1 72.8860179719654 23.35933433526933 2 9.079437913556546 5.819761641544608 3 3.890218903710126 3.7403438905430164 4 2.278422830977448 2.9208587406371596 5 1.5748644291714193 2.523651706963068 6 1.2126522282935723 2.33186690297838 7 0.8841684024015122 1.9835779380656238 8 0.6926512445198733 1.7759095583686269 9 0.588972571897054 1.6988452440747563 >10 6.699574118588629 46.986521957833894 >50 0.1825336071258712 3.495736656964015 >100 0.027437200013263028 1.4864482500659442 >500 0.0011432166672192855 0.20811008282904933 >1k 0.0019053611120321426 1.6690330938625513 >5k 0.0 0.0 >10k+ 0.0 0.0 >>END_MODULE >>Overrepresented sequences warn #Sequence Count Percentage Possible Source CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 3340 0.4124857204606502 No Hit GAATGATACGGCTGTCTCTTATACACATCTGACGCGGCAGACTTCGTATGC 3239 0.40001234987187007 No Hit GAATGATACCTGTCTCTTATACACATCTGACGCGGCAGACTTCGTATGCCG 3092 0.3818580382228534 No Hit GAATCTGTCTCTTATACACATCTGACGCGGCAGACTTCGTATGCCGTCTTC 2527 0.3120812621569051 No Hit GCTGTCTCTTATACACATCTGACGCGGCAGACTTCGTATGCCGTCTTCTGC 1468 0.18129611905276483 No Hit >>END_MODULE >>Adapter Content fail #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.07471672481398005 0.0 2 0.0 0.0 0.0 0.4326160116088796 0.0 3 0.0 0.0 0.0 0.5467288276884127 0.0 4 0.0 0.0 0.0 0.7849578560622433 0.0 5 0.0 0.0 0.0 1.603754361048504 0.0 6 0.0 0.0 0.0 1.9643706196548212 0.0 7 0.0 0.0 0.0 2.3288153385408625 0.0 8 0.0 0.0 0.0 2.905060359998765 0.0 9 0.0 0.0 0.0 3.085862484176727 0.0 10 0.0 0.0 0.0 3.9835746704127946 0.0 11 0.0 0.0 0.0 4.609713174225817 0.0 12 0.0 0.0 0.0 5.614745747012875 0.0 13 0.0 0.0 0.0 5.8521102843558 0.0 14 0.0 0.0 0.0 5.965235110685726 0.0 15 0.0 0.0 0.0 6.189508783846367 0.0 16 0.0 0.0 0.0 6.57754175800426 0.0 17 0.0 0.0 0.0 7.047083886504677 0.0 18 0.0 0.0 0.0 7.551576152397419 0.0 19 0.0 0.0 0.0 7.891444626262002 0.0 20 0.0 0.0 0.0 8.229707616783475 0.0 21 0.0 0.0 0.0 8.625768007656921 0.0 22 0.0 0.0 0.0 9.052456080768161 0.0 23 0.0 0.0 0.0 9.485689585970546 0.0 24 0.0 0.0 0.0 9.835808453487296 0.0 25 0.0 0.0 0.0 10.14961869770601 0.0 26 0.0 0.0 0.0 10.458118497020594 0.0 27 0.0 0.0 0.0 10.76735928864738 0.0 28 0.0 0.0 0.0 11.086850473926333 0.0 29 0.0 0.0 0.0 11.423878477260798 0.0 30 0.0 0.0 0.0 11.813887430917903 0.0 31 0.0 0.0 0.0 12.183766093426781 0.0 32 0.0 0.0 0.0 12.539318904566365 0.0 33 0.0 0.0 0.0 12.874988421995122 0.0 34 0.0 0.0 0.0 13.230911729290808 0.0 35 0.0 0.0 0.0 13.624749143227639 0.0 36 0.0 0.0 0.0 13.985118404396554 0.0 37 0.0 0.0 0.0 14.36747043749421 0.0 38 0.0 0.0 0.0 14.749451974435765 0.0 39 0.0 0.0 0.0 15.133779987032634 0.0 >>END_MODULE >>Kmer Content fail #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position GCCGCAT 30 2.164703E-6 45.000004 19 CGACGGT 40 6.8102963E-9 45.0 28 CAACCGA 25 3.8897808E-5 45.0 25 AATAGCG 25 3.8897808E-5 45.0 1 TGTCGCA 20 7.0320506E-4 45.0 38 CGTTTTT 1875 0.0 42.359997 1 TAACGCC 45 1.9270374E-8 40.0 12 GCCGATC 45 1.9270374E-8 40.0 9 TTAGGCG 80 0.0 39.375 1 AATTGCG 40 3.4565346E-7 39.375 1 TACGTTG 40 3.4565346E-7 39.375 1 CTATACG 35 6.246004E-6 38.571426 18 CGCATCG 35 6.246004E-6 38.571426 21 TAGCGCG 35 6.246004E-6 38.571426 1 GGCCGAT 175 0.0 38.571426 8 GCGTTAG 35 6.246004E-6 38.571426 1 GCGATAC 35 6.246004E-6 38.571426 9 CCGTTGT 35 6.246004E-6 38.571426 45 CGTTAGG 120 0.0 37.500004 2 GCTACCG 30 1.1396237E-4 37.500004 1 >>END_MODULE