##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR2936616.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 828044 Sequences flagged as poor quality 0 Sequence length 51 %GC 44 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 30.94689774939496 31.0 30.0 33.0 28.0 34.0 2 30.98278231591558 31.0 31.0 33.0 28.0 34.0 3 30.748809242020954 31.0 30.0 34.0 27.0 34.0 4 34.71718411098927 35.0 35.0 37.0 32.0 37.0 5 34.941994628304776 35.0 35.0 37.0 32.0 37.0 6 34.89334503963558 35.0 35.0 37.0 32.0 37.0 7 31.13393370400607 35.0 35.0 37.0 0.0 37.0 8 32.85915241219065 35.0 33.0 37.0 17.0 37.0 9 35.726446903787725 37.0 34.0 39.0 31.0 39.0 10 35.722206790943474 37.0 35.0 39.0 31.0 39.0 11 36.0304247117303 37.0 35.0 39.0 31.0 39.0 12 36.20802155441015 37.0 35.0 39.0 32.0 39.0 13 36.0098352261474 37.0 35.0 39.0 31.0 39.0 14 37.22292414412761 39.0 36.0 40.0 32.0 41.0 15 37.1245863746371 39.0 36.0 40.0 31.0 41.0 16 37.36692011535619 39.0 36.0 40.0 32.0 41.0 17 37.03661520402297 39.0 36.0 40.0 31.0 41.0 18 36.98994618643454 39.0 36.0 40.0 31.0 41.0 19 36.74203907038756 38.0 35.0 40.0 31.0 41.0 20 36.58611015839738 38.0 35.0 40.0 30.0 41.0 21 36.924427928950635 39.0 35.0 40.0 31.0 41.0 22 37.01072406780316 39.0 35.0 40.0 32.0 41.0 23 37.093146016395266 39.0 35.0 40.0 32.0 41.0 24 36.93328373854529 39.0 35.0 40.0 31.0 41.0 25 36.78025563858925 38.0 35.0 40.0 31.0 41.0 26 36.594936984025004 38.0 35.0 40.0 31.0 41.0 27 36.68842597736352 38.0 35.0 40.0 31.0 41.0 28 36.61927506267783 38.0 35.0 40.0 31.0 41.0 29 36.49009955992677 38.0 35.0 40.0 30.0 41.0 30 36.33891798020395 38.0 35.0 40.0 30.0 41.0 31 36.28997009820734 38.0 35.0 40.0 30.0 41.0 32 36.00893189250813 38.0 35.0 40.0 30.0 41.0 33 35.83547371878789 38.0 35.0 40.0 29.0 41.0 34 35.74596881325147 38.0 35.0 40.0 28.0 41.0 35 35.73367115757134 38.0 35.0 40.0 28.0 41.0 36 35.63416074508118 38.0 35.0 40.0 27.0 41.0 37 35.471733386148564 38.0 35.0 40.0 26.0 41.0 38 35.307379801073374 38.0 35.0 40.0 25.0 41.0 39 35.25843674973794 38.0 34.0 40.0 25.0 41.0 40 35.164230403215285 38.0 34.0 40.0 25.0 41.0 41 35.15319475776649 38.0 34.0 40.0 25.0 41.0 42 35.16338986817126 38.0 34.0 40.0 24.0 41.0 43 35.21739907541145 38.0 35.0 40.0 25.0 41.0 44 34.99091352633435 38.0 34.0 40.0 24.0 41.0 45 34.99706778866823 38.0 34.0 40.0 24.0 41.0 46 34.791186217157545 38.0 34.0 40.0 23.0 41.0 47 34.55382926511152 38.0 33.0 40.0 23.0 41.0 48 34.581820531276115 38.0 34.0 40.0 23.0 41.0 49 34.55480505866838 38.0 34.0 40.0 23.0 41.0 50 34.41089483167561 38.0 33.0 40.0 23.0 41.0 51 32.564907178845566 36.0 31.0 39.0 18.0 40.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 7 2.0 8 12.0 9 49.0 10 52.0 11 32.0 12 12.0 13 15.0 14 12.0 15 36.0 16 82.0 17 172.0 18 406.0 19 960.0 20 1735.0 21 2652.0 22 3795.0 23 5130.0 24 7394.0 25 9942.0 26 12592.0 27 13845.0 28 15058.0 29 17200.0 30 21102.0 31 27232.0 32 35766.0 33 46991.0 34 64653.0 35 74767.0 36 85642.0 37 118299.0 38 151194.0 39 111204.0 40 9.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 49.137123148045276 18.285380970093374 20.312809464231368 12.264686417629981 2 29.6398500562772 34.529566061706866 21.575665061276936 14.254918820738993 3 26.672012598364336 33.58710406693364 26.53337262271087 13.20751071199115 4 23.889068696832535 20.922197371154187 39.54451695803605 15.64421697397723 5 31.514267357773257 25.326914994855347 25.46664186927265 17.692175778098747 6 21.580133422861586 40.03108530464565 26.43035877320529 11.958422499287478 7 59.44406335895194 16.17571046949196 20.764597050398287 3.615629121157813 8 66.89765278173624 14.043939694025923 13.742023370738753 5.316384153499089 9 62.39040437464676 6.244716464342474 13.924260063474888 17.44061909753588 10 38.115607383182535 21.19537126046442 24.172628507663845 16.5163928486892 11 28.642922356782975 22.95735492316833 28.73265188806392 19.667070831984773 12 24.508600992217804 19.723951867292076 33.0709479206419 22.69649921984822 13 20.927028032326785 23.04901671891832 40.19629391674839 15.827661332006512 14 20.138543362430017 28.911748651037865 29.403993024525267 21.54571496200685 15 16.21387269275546 25.106395312326395 41.67991072938153 16.999821265536614 16 18.03805111805653 25.741989556110546 29.654945872441562 26.565013453391366 17 18.408321296935913 25.299380226171557 34.69875996927699 21.593538507615538 18 18.765910990237234 26.02397940206076 32.847771374468024 22.362338233233984 19 18.555052630053474 28.686156774277695 30.09477757220631 22.66401302346252 20 19.796894850998257 26.778166377632107 36.969533019984446 16.45540575138519 21 19.215283245817854 32.195994415755685 30.90246412026414 17.686258218162322 22 17.433010806189042 23.552854679219944 32.63956987792919 26.37456463666182 23 17.708237726497625 31.10027969528189 32.05047074793127 19.141011830289212 24 20.819062755119294 24.213568361101583 28.8535391839081 26.113829699871022 25 16.576051514170747 35.39038988266324 27.661211239982414 20.3723473631836 26 17.144499567655824 25.872779707358546 32.66855384496476 24.314166880020867 27 20.8142320939467 28.403804628739536 27.443589954157027 23.33837332315674 28 15.171295245180207 27.396974073841484 35.816937264203354 21.614793416774955 29 20.20556878619977 27.531628754027565 28.747143871581706 23.515658588190966 30 16.827125128616355 28.76489655139099 31.88526213582853 22.522716184164125 31 20.015723802116796 29.458458729246274 25.865412949070336 24.66040451956659 32 20.095550477993925 32.98701518276806 26.365024080845945 20.552410258392065 33 16.465187840259695 25.063523194419616 29.24518503847622 29.226103926844466 34 19.45017414533527 29.782596093927378 26.67479022853858 24.092439532198775 35 15.914130166995957 24.451599190381188 26.37456463666182 33.259706005961036 36 16.841013279487562 32.38994546183536 25.808169614175092 24.960871644501985 37 15.749525387539792 29.312693528363226 29.633207897164887 25.304573186932096 38 16.267613798300573 30.35515020940916 28.38424045099053 24.992995541299738 39 19.30646197545058 28.279052803957278 27.69405973595606 24.72042548463608 40 17.47588292409582 23.705020506156675 33.33095825825681 25.488138311490694 41 15.764258904116208 27.078029669920923 25.58233620435629 31.575375221606585 42 16.723145146876252 24.724893846220734 32.06351353309728 26.48844747380574 43 20.21003714778442 24.940824400635712 26.12614788586114 28.72299056571873 44 19.126278313712795 24.77851418523653 30.451038833685168 25.644168667365502 45 17.268285260203562 23.794025438261734 29.384428846776256 29.553260454758444 46 23.796682301906664 28.004308949765957 26.16636314012299 22.032645608204398 47 15.248706590471036 23.707435836742974 38.0007584138041 23.04309915898189 48 19.62902937525059 26.60112264565651 26.773939549106085 26.995908429986816 49 16.44864282574356 22.58623937858375 35.63880663346392 25.32631116220877 50 19.445222717633364 22.02552038297482 31.32526773939549 27.20398915999633 51 18.446362753670094 22.312220123568313 27.515566805628687 31.72585031713291 >>END_MODULE >>Per sequence GC content fail #GC Content Count 0 142.0 1 498.0 2 854.0 3 6643.0 4 12432.0 5 8627.0 6 4822.0 7 4522.0 8 4222.0 9 4032.0 10 3842.0 11 3670.5 12 3499.0 13 3426.5 14 3354.0 15 3185.0 16 3016.0 17 2912.5 18 2809.0 19 2788.0 20 2767.0 21 3373.0 22 3979.0 23 4115.0 24 4251.0 25 4763.0 26 5658.5 27 6042.0 28 7957.5 29 9873.0 30 12236.5 31 14600.0 32 16321.5 33 18043.0 34 19988.5 35 21934.0 36 24049.5 37 26165.0 38 29900.5 39 33636.0 40 36792.5 41 39949.0 42 44100.0 43 48251.0 44 54658.5 45 61066.0 46 115701.0 47 170336.0 48 125618.5 49 80901.0 50 76839.5 51 72778.0 52 60414.0 53 48050.0 54 40289.5 55 32529.0 56 28780.0 57 25031.0 58 22085.0 59 19139.0 60 17619.0 61 16099.0 62 13843.5 63 11588.0 64 9410.0 65 7232.0 66 5692.0 67 4152.0 68 3098.5 69 2045.0 70 1787.0 71 1529.0 72 1233.0 73 937.0 74 696.5 75 336.5 76 217.0 77 153.0 78 89.0 79 77.0 80 65.0 81 42.5 82 20.0 83 16.5 84 13.0 85 11.5 86 10.0 87 6.0 88 2.0 89 2.0 90 2.0 91 1.5 92 1.0 93 0.5 94 0.0 95 0.0 96 0.0 97 0.0 98 0.0 99 0.0 100 0.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 44 0.0 45 0.0 46 0.0 47 0.0 48 0.0 49 0.0 50 0.0 51 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 51 828044.0 >>END_MODULE >>Sequence Duplication Levels fail #Total Deduplicated Percentage 36.596246555994576 #Duplication Level Percentage of deduplicated Percentage of total 1 77.56221971981986 28.384861162967525 2 9.415007132493738 6.891078446943768 3 3.566679416747779 3.9158123796447795 4 1.9074187292109808 2.792174643989076 5 1.236281556116892 2.2621632320141214 6 0.8466973916938831 1.8591567902848116 7 0.6583493483175482 1.6865180549705143 8 0.4834237457124051 1.4153195671290884 9 0.39436528975470814 1.2989060439290585 >10 3.751799498329716 29.65278372093141 >50 0.1363356333064833 3.1135831478453446 >100 0.03392081892592454 2.1671536727052056 >500 0.0026092937635324703 0.6821592442999407 >1k 0.002935455483974029 2.616197080763972 >5k 9.784851613246763E-4 2.2671798226129614 >10k+ 9.784851613246763E-4 8.994952988968492 >>END_MODULE >>Overrepresented sequences fail #Sequence Count Percentage Possible Source GAATGATACGGCTGTCTCTTATACACATCTGACGCACAATCCCTCGTATGC 27014 3.2623870229118257 No Hit GAATGATACCTGTCTCTTATACACATCTGACGCACAATCCCTCGTATGCCG 26617 3.214442710773824 No Hit GAATCTGTCTCTTATACACATCTGACGCACAATCCCTCGTATGCCGTCTTC 21727 2.6238943824241225 No Hit GCTGTCTCTTATACACATCTGACGCACAATCCCTCGTATGCCGTCTTCTGC 6873 0.8300283559810832 TruSeq Adapter, Index 19 (95% over 21bp) CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 6844 0.8265261266309519 No Hit GAATGACTGTCTCTTATACACATCTGACGCACAATCCCTCGTATGCCGTCT 5277 0.637284975194555 No Hit GAACTGTCTCTTATACACATCTGACGCACAATCCCTCGTATGCCGTCTTCT 4290 0.5180884107607808 No Hit GAATGATCTGTCTCTTATACACATCTGACGCACAATCCCTCGTATGCCGTC 3597 0.4343972059455778 No Hit GAATGATACGGCGACTGTCTCTTATACACATCTGACGCACAATCCCTCGTA 2976 0.3594011912410452 No Hit GAATGAAACGGCTGTCTCTTATACACATCTGACGCACAATCCCTCGTATGC 2480 0.299500992700871 No Hit GAATGAAACCTGTCTCTTATACACATCTGACGCACAATCCCTCGTATGCCG 2344 0.28307674471404903 No Hit GAATCTATCTCTTATACACATCTGACGCACAATCCCTCGTATGCCGTCTTC 2312 0.27921221577597327 No Hit GAATGCTGTCTCTTATACACATCTGACGCACAATCCCTCGTATGCCGTCTT 1455 0.17571530015313197 No Hit CTGTCTCTTATACACATCTGACGCACAATCCCTCGTATGCCGTCTTCTGCT 1286 0.15530575669891938 TruSeq Adapter, Index 13 (95% over 22bp) GAATGATACGGCGACCACCTGTCTCTTATACACATCTGACGCACAATCCCT 1178 0.14226297153291373 No Hit GAATGATACGGCCTGTCTCTTATACACATCTGACGCACAATCCCTCGTATG 922 0.11134674002830768 No Hit CCTGTCTCTTATACACATCTGACGCACAATCCCTCGTATGCCGTCTTCTGC 919 0.11098444044036308 TruSeq Adapter, Index 19 (95% over 21bp) >>END_MODULE >>Adapter Content fail #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 1.2076652931486733E-4 0.0 0.0 0.18380665761722806 0.0 2 1.2076652931486733E-4 0.0 0.0 1.3934042152349393 0.0 3 1.2076652931486733E-4 0.0 0.0 1.6478592925013646 0.0 4 1.2076652931486733E-4 0.0 0.0 2.513030708513074 0.0 5 1.2076652931486733E-4 0.0 0.0 6.11259788127201 0.0 6 1.2076652931486733E-4 0.0 0.0 6.8282603339919135 0.0 7 1.2076652931486733E-4 0.0 0.0 7.993053509233809 0.0 8 1.2076652931486733E-4 0.0 0.0 9.293829796484244 0.0 9 1.2076652931486733E-4 0.0 0.0 9.600697547473322 0.0 10 1.2076652931486733E-4 0.0 0.0 14.055654047369464 0.0 11 1.2076652931486733E-4 0.0 0.0 15.172019844356097 0.0 12 1.2076652931486733E-4 0.0 0.0 19.81235296675056 0.0 13 1.2076652931486733E-4 0.0 0.0 20.32693914816121 0.0 14 1.2076652931486733E-4 0.0 0.0 20.59021018206762 0.0 15 1.2076652931486733E-4 0.0 0.0 21.28594615745057 0.0 16 1.2076652931486733E-4 0.0 0.0 22.010786866398405 0.0 17 1.2076652931486733E-4 0.0 0.0 22.853737241016177 0.0 18 1.2076652931486733E-4 0.0 0.0 23.691856954461358 0.0 19 1.2076652931486733E-4 0.0 0.0 24.43155194651492 0.0 20 1.2076652931486733E-4 0.0 0.0 24.970895266435118 0.0 21 1.2076652931486733E-4 0.0 0.0 25.60866330774693 0.0 22 1.2076652931486733E-4 0.0 0.0 26.30186318601427 0.0 23 1.2076652931486733E-4 0.0 0.0 27.05411789711658 0.0 24 1.2076652931486733E-4 0.0 0.0 27.62377361589481 0.0 25 1.2076652931486733E-4 0.0 0.0 28.143069691948735 0.0 26 1.2076652931486733E-4 0.0 0.0 28.618406751332056 0.0 27 1.2076652931486733E-4 0.0 0.0 29.132751399684075 0.0 28 1.2076652931486733E-4 0.0 0.0 29.62886030210955 0.0 29 1.2076652931486733E-4 0.0 0.0 30.118930878069282 0.0 30 1.2076652931486733E-4 0.0 0.0 30.641366883885397 0.0 31 1.2076652931486733E-4 0.0 0.0 31.184453966214356 0.0 32 1.2076652931486733E-4 0.0 0.0 31.70616537285458 0.0 33 1.2076652931486733E-4 0.0 0.0 32.192250653346925 0.0 34 1.2076652931486733E-4 0.0 0.0 32.65237113003657 0.0 35 1.2076652931486733E-4 0.0 0.0 33.133746515885626 0.0 36 1.2076652931486733E-4 0.0 0.0 33.64169053818396 0.0 37 1.2076652931486733E-4 0.0 0.0 34.1334518455541 0.0 38 1.2076652931486733E-4 0.0 0.0 34.62642081821739 0.0 39 1.2076652931486733E-4 0.0 0.0 35.117940592528896 0.0 >>END_MODULE >>Kmer Content warn #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position CGGCGAA 20 7.0321443E-4 45.0 31 CTCGTCC 25 3.889857E-5 45.0 37 CGACGGT 20 7.0321443E-4 45.0 28 CGACGCG 25 3.889857E-5 45.0 15 CGACCGG 20 7.0321443E-4 45.0 2 TAGCACG 20 7.0321443E-4 45.0 1 CGCTCAC 20 7.0321443E-4 45.0 34 ACATGCG 25 3.889857E-5 45.0 1 TATCGCG 20 7.0321443E-4 45.0 1 TACCGAA 25 3.889857E-5 45.0 29 ACTACGG 60 0.0 44.999996 2 CGGTCGG 30 2.1647647E-6 44.999996 2 TTCGCGG 65 0.0 44.999996 2 CGTTTTT 3830 0.0 43.53133 1 ACGGCTG 3165 0.0 43.151657 8 TACGGCT 2925 0.0 43.0 7 CGGCTGT 3145 0.0 42.782196 9 TGATACC 3025 0.0 41.876034 4 GATACCT 3055 0.0 41.61211 5 ATGATAC 8290 0.0 40.765984 3 >>END_MODULE