##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR2936614.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 792246 Sequences flagged as poor quality 0 Sequence length 51 %GC 47 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 31.22869916667298 31.0 31.0 33.0 30.0 34.0 2 31.270529608227747 31.0 31.0 34.0 28.0 34.0 3 31.05660741739308 31.0 31.0 34.0 28.0 34.0 4 35.009000992116086 35.0 35.0 37.0 32.0 37.0 5 35.221351701365485 35.0 35.0 37.0 33.0 37.0 6 35.18264402723396 36.0 35.0 37.0 32.0 37.0 7 30.779547009388498 35.0 35.0 37.0 0.0 37.0 8 32.918815620400736 35.0 35.0 37.0 17.0 37.0 9 36.27804621291872 39.0 35.0 39.0 32.0 39.0 10 36.15670006538373 37.0 35.0 39.0 32.0 39.0 11 36.37352160818735 38.0 35.0 39.0 32.0 39.0 12 36.44177313612186 38.0 35.0 39.0 32.0 39.0 13 36.367709019673185 38.0 35.0 39.0 32.0 39.0 14 37.376525725595336 39.0 36.0 41.0 32.0 41.0 15 37.5289947819238 39.0 36.0 41.0 32.0 41.0 16 37.53786955061938 39.0 36.0 41.0 33.0 41.0 17 37.40457509409956 39.0 36.0 41.0 32.0 41.0 18 37.328886482229 39.0 36.0 40.0 32.0 41.0 19 37.16687745977891 39.0 36.0 40.0 32.0 41.0 20 37.10604029556476 39.0 35.0 40.0 32.0 41.0 21 37.135054011001635 39.0 35.0 40.0 32.0 41.0 22 37.22986673331263 39.0 35.0 40.0 32.0 41.0 23 37.303188656048754 39.0 35.0 40.0 32.0 41.0 24 37.23967681755414 39.0 35.0 41.0 32.0 41.0 25 36.9421846244727 39.0 35.0 40.0 31.0 41.0 26 36.905549538905845 39.0 35.0 40.0 31.0 41.0 27 36.9163504769983 39.0 35.0 40.0 31.0 41.0 28 36.89157534402193 39.0 35.0 40.0 31.0 41.0 29 36.866586893464905 39.0 35.0 40.0 31.0 41.0 30 36.63650810480583 39.0 35.0 40.0 31.0 41.0 31 36.584658048131516 39.0 35.0 40.0 31.0 41.0 32 36.44803003107621 39.0 35.0 40.0 30.0 41.0 33 36.27479722207496 39.0 35.0 40.0 30.0 41.0 34 36.17905423315485 39.0 35.0 40.0 30.0 41.0 35 36.08267760266382 39.0 35.0 40.0 30.0 41.0 36 36.01813704329211 38.0 35.0 40.0 29.0 41.0 37 35.96612542063955 38.0 35.0 40.0 29.0 41.0 38 35.74454651711716 38.0 35.0 40.0 28.0 41.0 39 35.69882460750827 38.0 35.0 40.0 28.0 41.0 40 35.559793296526585 38.0 35.0 40.0 27.0 41.0 41 35.39441915768587 38.0 34.0 40.0 26.0 41.0 42 35.41757358194298 38.0 34.0 40.0 27.0 41.0 43 35.39912476680223 38.0 34.0 40.0 27.0 41.0 44 35.20670978458711 38.0 34.0 40.0 26.0 41.0 45 35.122631101955704 38.0 34.0 40.0 26.0 41.0 46 35.033906135215574 38.0 34.0 40.0 26.0 41.0 47 34.93321013927492 37.0 34.0 40.0 25.0 41.0 48 34.84046116988915 37.0 34.0 40.0 25.0 41.0 49 34.75040454606271 37.0 34.0 40.0 25.0 41.0 50 34.59640818634616 37.0 34.0 40.0 24.0 41.0 51 32.91035865122702 35.0 31.0 39.0 20.0 40.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 7 4.0 8 43.0 9 49.0 10 85.0 11 72.0 12 47.0 13 42.0 14 59.0 15 87.0 16 136.0 17 257.0 18 474.0 19 837.0 20 1459.0 21 2010.0 22 3051.0 23 4308.0 24 5954.0 25 7923.0 26 9914.0 27 11410.0 28 12600.0 29 15077.0 30 18044.0 31 22911.0 32 30348.0 33 42053.0 34 63368.0 35 67205.0 36 79667.0 37 117099.0 38 152602.0 39 123046.0 40 5.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 43.59933656970183 20.662016595855327 23.063669617770238 12.6749772166726 2 34.06618651277507 25.275608838668795 24.856168412336572 15.802036236219557 3 32.511745089277824 24.326030046223014 27.444000979493744 15.718223885005415 4 28.906173082603132 24.34849781507259 28.218129217440037 18.52719988488424 5 26.955642565566755 28.43447616018257 25.613887605617446 18.995993668633226 6 26.62178161833572 34.44182741219268 25.409405664402218 13.526985305069386 7 67.62179928961459 18.41763795588744 10.348553353377612 3.612009401120359 8 79.48389767824641 7.042130853295567 9.642585762503062 3.8313857059549683 9 73.19582553903712 7.394420419920075 11.6112924520919 7.798461588950907 10 43.41972064232574 24.018297347036146 18.44187285262406 14.120109158014053 11 31.566962786811164 25.807766779510406 25.147239620017015 17.478030813661412 12 28.827409668209114 22.562183968110915 29.007656712687723 19.602749650992244 13 25.839575081477218 23.460011158150373 31.202555771818346 19.49785798855406 14 21.573854585570643 25.949768127576533 30.63985176321496 21.83652552363786 15 20.19044589685527 25.623354362155187 33.996258737816284 20.189941003173256 16 25.047523117819466 25.17096962307162 29.16341641358871 20.618090845520204 17 24.569262577532736 25.572864993953896 28.94214675744655 20.915725671066816 18 24.83609888847656 25.121237595393346 29.374840642931616 20.667822873198478 19 25.262607826356962 26.371859245739326 26.962711077114935 21.40282185078877 20 25.354372253062813 27.193447489794835 28.458206163237175 18.993974093905173 21 25.304514001964034 26.987703314374578 29.28888249356892 18.418900190092472 22 24.110440444003505 23.259063472709236 30.724547678372627 21.905948404914636 23 23.300843424895803 25.474536949381882 30.57610893586083 20.64851068986148 24 23.56035877745044 25.031997637097568 29.17174715934192 22.23589642611007 25 23.74224672639559 27.357916606710543 27.68710728738296 21.212729379510908 26 22.312009148673518 26.276939233520903 27.95545827937282 23.45559333843276 27 21.925639258513137 26.954127884520716 28.700681354023878 22.419551502942266 28 20.33004899993184 27.46646874834332 29.951807898051868 22.251674353672975 29 22.614566687619757 26.01919100885331 29.324098827889316 22.04214347563762 30 22.889481297475783 25.372295978774268 29.882637463616096 21.855585260133847 31 24.16269694009184 26.393064780383867 27.8099226755326 21.634315603991688 32 26.230489014775713 25.82177757918626 27.456623321544065 20.491110084493958 33 24.94099055091474 24.86348937072576 27.73330505928714 22.46221501907236 34 23.626121179532618 25.202020584515417 30.480305359698885 20.691552876253084 35 22.939213325154057 25.759170762616662 29.223498761748246 22.078117150481038 36 24.700156264594582 27.395278739179496 27.616169725060146 20.288395271165776 37 23.841205888070117 27.090070508402693 27.653784304370106 21.41493929915708 38 23.156317608419606 27.427465711407823 27.941321256276456 21.47489542389611 39 24.744460685191218 25.44588423292765 27.435417786899524 22.374237294981608 40 24.59248768690533 24.04493048876233 30.152629360072503 21.20995246425984 41 22.73208069210826 25.57538946236396 28.49935499832123 23.19317484720655 42 22.267199834394873 25.304387778543536 29.77888181196245 22.649530575099146 43 23.52842425206312 24.74938339859084 27.969469079048682 23.752723270297356 44 23.00585929117976 24.58933210139275 28.57281702905411 23.831991578373383 45 22.60535237792302 24.760364836174624 27.627529832905434 25.006752952996926 46 23.7934934351199 25.82480694127834 27.85258619166269 22.52911343193907 47 21.62838310322804 25.575010792102454 30.716343156039915 22.080262948629592 48 22.012733418660364 26.389025630927765 28.963604738932098 22.634636211479766 49 22.861964591806082 25.09069152763157 30.244772457039858 21.80257142352249 50 21.911880905678288 25.194447179285223 29.974023220060435 22.919648694976054 51 21.586981821302977 25.079962536888793 28.42475695680382 24.908298685004404 >>END_MODULE >>Per sequence GC content warn #GC Content Count 0 302.0 1 781.0 2 1260.0 3 5001.0 4 8742.0 5 5766.5 6 2791.0 7 2613.5 8 2436.0 9 2406.5 10 2377.0 11 2347.0 12 2317.0 13 2274.0 14 2231.0 15 2203.0 16 2175.0 17 2226.0 18 2277.0 19 2204.0 20 2131.0 21 2538.0 22 2945.0 23 3333.5 24 3722.0 25 4679.5 26 6862.5 27 8088.0 28 9347.5 29 10607.0 30 12767.5 31 14928.0 32 17601.5 33 20275.0 34 22855.5 35 25436.0 36 27144.5 37 28853.0 38 30128.0 39 31403.0 40 33750.5 41 36098.0 42 38210.5 43 40323.0 44 43376.0 45 46429.0 46 58354.0 47 70279.0 48 64741.0 49 59203.0 50 58074.0 51 56945.0 52 52542.5 53 48140.0 54 45965.0 55 43790.0 56 42892.5 57 41995.0 58 39727.0 59 37459.0 60 35647.0 61 33835.0 62 30899.0 63 27963.0 64 24508.0 65 21053.0 66 18752.5 67 16452.0 68 13961.0 69 11470.0 70 9748.0 71 8026.0 72 6493.5 73 4961.0 74 4096.5 75 2465.5 76 1699.0 77 1303.0 78 907.0 79 665.5 80 424.0 81 342.0 82 260.0 83 231.0 84 202.0 85 133.5 86 65.0 87 47.5 88 30.0 89 37.0 90 44.0 91 30.5 92 17.0 93 14.0 94 11.0 95 6.0 96 1.0 97 0.5 98 0.0 99 0.0 100 0.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 44 0.0 45 0.0 46 0.0 47 0.0 48 0.0 49 0.0 50 0.0 51 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 51 792246.0 >>END_MODULE >>Sequence Duplication Levels fail #Total Deduplicated Percentage 31.398040057304684 #Duplication Level Percentage of deduplicated Percentage of total 1 72.19116168618517 22.66660986406201 2 8.57760775891563 5.386401440205607 3 3.9615189527230816 3.731517922961131 4 2.5095698829010322 3.1518230283972812 5 1.722407951753107 2.7040116932082086 6 1.2377015599967303 2.3316841895859497 7 0.9329138430934362 2.0504166350823234 8 0.6998578612621862 1.7579332129863765 9 0.6166516653917393 1.7425488322236127 >10 7.436360935379235 48.34039367918281 >50 0.08687600979077456 1.70614308213178 >100 0.023008257554445796 1.4747213857490242 >500 0.0019834704788315328 0.43307485289268205 >1k 0.0019834704788315328 1.8846291628182836 >5k 3.966940957663065E-4 0.6380910185128588 >10k+ 0.0 0.0 >>END_MODULE >>Overrepresented sequences warn #Sequence Count Percentage Possible Source CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 5123 0.6466425832380347 No Hit GAATGATACCTGTCTCTTATACACATCTGACGCTCAGTGTGTCGTATGCCG 4460 0.5629564554443949 No Hit GAATGATACGGCTGTCTCTTATACACATCTGACGCTCAGTGTGTCGTATGC 4280 0.5402362397538139 No Hit GAATCTGTCTCTTATACACATCTGACGCTCAGTGTGTCGTATGCCGTCTTC 4013 0.5065345864794522 No Hit GCTGTCTCTTATACACATCTGACGCTCAGTGTGTCGTATGCCGTCTTCTGC 1339 0.16901316005382166 TruSeq Adapter, Index 14 (95% over 21bp) GAACTGTCTCTTATACACATCTGACGCTCAGTGTGTCGTATGCCGTCTTCT 1039 0.1311461339028534 No Hit GGGGTTGGGGATTTAGCTCAGTGGTAGAGCGCTTGCCTAGCAAGCGCAAGG 877 0.11069793978133054 No Hit >>END_MODULE >>Adapter Content fail #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.05642186896494271 0.0 2 0.0 0.0 0.0 0.358348290808663 0.0 3 0.0 0.0 0.0 0.48861086076799376 0.0 4 0.0 0.0 0.0 0.7644090345675459 0.0 5 0.0 0.0 0.0 1.7095700072957136 0.0 6 0.0 0.0 0.0 2.1256024012743517 0.0 7 0.0 0.0 0.0 2.478649308421879 0.0 8 0.0 0.0 0.0 2.9511035713654596 0.0 9 0.0 0.0 0.0 3.15760508730874 0.0 10 0.0 0.0 0.0 4.166382663970534 0.0 11 0.0 0.0 0.0 4.661935812866206 0.0 12 0.0 0.0 0.0 5.693181158377574 0.0 13 0.0 0.0 0.0 5.9080134200740675 0.0 14 0.0 0.0 0.0 6.037013755828366 0.0 15 0.0 0.0 0.0 6.255632720139957 0.0 16 0.0 0.0 0.0 6.546072810717883 0.0 17 0.0 0.0 0.0 6.850902371233177 0.0 18 0.0 0.0 0.0 7.1826175203156595 0.0 19 0.0 0.0 0.0 7.429384307399469 0.0 20 0.0 0.0 0.0 7.660499390340879 0.0 21 0.0 0.0 0.0 7.941977618063077 0.0 22 0.0 0.0 0.0 8.235699517574087 0.0 23 0.0 0.0 0.0 8.507837212179046 0.0 24 0.0 0.0 0.0 8.733398464618313 0.0 25 0.0 0.0 0.0 8.952396099191413 0.0 26 0.0 0.0 0.0 9.162810541170293 0.0 27 0.0 0.0 0.0 9.405790625639007 0.0 28 0.0 0.0 0.0 9.631351878078274 0.0 29 0.0 0.0 0.0 9.876477760695542 0.0 30 0.0 0.0 0.0 10.232554029935146 0.0 31 0.0 0.0 0.0 10.494846297740853 0.0 32 0.0 0.0 0.0 10.751332288203411 0.0 33 0.0 0.0 0.0 11.017916152306228 0.0 34 0.0 0.0 0.0 11.284878686670554 0.0 35 0.0 0.0 0.0 11.576202341192003 0.0 36 0.0 0.0 0.0 11.858942803119232 0.0 37 0.0 0.0 0.0 12.128303582473121 0.0 38 0.0 0.0 0.0 12.45484357131497 0.0 39 0.0 0.0 0.0 12.949260709426113 0.0 >>END_MODULE >>Kmer Content warn #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position TTGCGAC 20 7.0319563E-4 45.000004 45 CGGTCTA 40 6.8102963E-9 45.000004 31 ATCGTAC 25 3.8897044E-5 45.0 6 AAACCGT 25 3.8897044E-5 45.0 35 CGAATAT 90 0.0 42.5 14 TACGGGA 105 0.0 40.714287 4 CGTTTTT 2255 0.0 40.609756 1 CGAATGG 50 1.0804797E-9 40.5 2 TACGGCT 575 0.0 39.521744 7 TCACGAC 40 3.4564073E-7 39.375004 25 ACGGGAT 270 0.0 39.166668 5 CGTTTTA 140 0.0 38.571426 1 ACGGTTG 35 6.245831E-6 38.571426 1 GCTACGA 100 0.0 38.25 10 TCGTACT 30 1.1396018E-4 37.499996 7 TCACGTA 30 1.1396018E-4 37.499996 32 TTTAGCG 55 2.746674E-9 36.81818 1 ACGGCTG 710 0.0 36.126762 8 GGGCGAT 785 0.0 36.114647 7 CGATTTC 25 0.002106714 36.0 26 >>END_MODULE