##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR2936612.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 486864 Sequences flagged as poor quality 0 Sequence length 51 %GC 46 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 31.146024351769693 31.0 31.0 33.0 28.0 34.0 2 31.195114035952546 31.0 31.0 34.0 28.0 34.0 3 30.944160997732425 31.0 31.0 34.0 27.0 34.0 4 34.935452200203756 35.0 35.0 37.0 32.0 37.0 5 35.188317476749155 35.0 35.0 37.0 33.0 37.0 6 35.167605327155016 36.0 35.0 37.0 32.0 37.0 7 31.082357701534722 35.0 35.0 37.0 0.0 37.0 8 33.10783709619113 36.0 35.0 37.0 17.0 37.0 9 36.32673190048966 39.0 35.0 39.0 32.0 39.0 10 36.15583201879786 37.0 35.0 39.0 32.0 39.0 11 36.39109278977291 38.0 35.0 39.0 32.0 39.0 12 36.41319957934865 38.0 35.0 39.0 32.0 39.0 13 36.3167927799139 38.0 35.0 39.0 32.0 39.0 14 37.35924405994282 39.0 36.0 40.0 32.0 41.0 15 37.553922656018926 39.0 36.0 41.0 33.0 41.0 16 37.48011970488679 39.0 36.0 41.0 33.0 41.0 17 37.353246491833445 39.0 36.0 40.0 32.0 41.0 18 37.279568832363864 39.0 36.0 40.0 32.0 41.0 19 37.10357101777909 39.0 35.0 40.0 32.0 41.0 20 37.0688344178251 39.0 35.0 40.0 32.0 41.0 21 37.06815044858523 39.0 35.0 40.0 32.0 41.0 22 37.14721359558316 39.0 35.0 40.0 32.0 41.0 23 37.22266793190706 39.0 35.0 40.0 32.0 41.0 24 37.163801390121264 39.0 35.0 40.0 32.0 41.0 25 36.86638979263203 39.0 35.0 40.0 31.0 41.0 26 36.848851013835485 39.0 35.0 40.0 31.0 41.0 27 36.84868258897762 39.0 35.0 40.0 31.0 41.0 28 36.88462897236189 39.0 35.0 40.0 31.0 41.0 29 36.839425383680044 39.0 35.0 40.0 31.0 41.0 30 36.586455355088894 38.0 35.0 40.0 31.0 41.0 31 36.56267047881955 38.0 35.0 40.0 31.0 41.0 32 36.352576900325346 38.0 35.0 40.0 30.0 41.0 33 36.176862532452596 38.0 35.0 40.0 30.0 41.0 34 36.072769808406456 38.0 35.0 40.0 30.0 41.0 35 35.945327647967396 38.0 35.0 40.0 29.0 41.0 36 35.90461401952085 38.0 35.0 40.0 29.0 41.0 37 35.82951296460613 38.0 35.0 40.0 29.0 41.0 38 35.734969108416315 38.0 35.0 40.0 29.0 41.0 39 35.732298958230636 38.0 35.0 40.0 29.0 41.0 40 35.607855581846266 38.0 35.0 40.0 28.0 41.0 41 35.441741430871865 38.0 34.0 40.0 27.0 41.0 42 35.40364044168392 38.0 34.0 40.0 27.0 41.0 43 35.346688192185084 38.0 34.0 40.0 27.0 41.0 44 35.168603552532126 38.0 34.0 40.0 26.0 41.0 45 35.07466972296165 38.0 34.0 40.0 26.0 41.0 46 34.96537842190016 38.0 34.0 40.0 26.0 41.0 47 34.91331665516448 37.0 34.0 40.0 26.0 41.0 48 34.83643070754872 37.0 34.0 40.0 25.0 41.0 49 34.736612277761346 37.0 34.0 40.0 25.0 41.0 50 34.56006400144599 37.0 34.0 40.0 24.0 41.0 51 32.89715608465608 35.0 31.0 39.0 20.0 40.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 7 2.0 8 22.0 9 37.0 10 40.0 11 35.0 12 19.0 13 25.0 14 26.0 15 38.0 16 88.0 17 137.0 18 244.0 19 430.0 20 714.0 21 1131.0 22 1589.0 23 2502.0 24 3494.0 25 4833.0 26 6389.0 27 7504.0 28 8271.0 29 9453.0 30 11442.0 31 14239.0 32 18736.0 33 25950.0 34 40574.0 35 43493.0 36 48347.0 37 70936.0 38 92937.0 39 73181.0 40 6.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 42.64250386144796 20.009489302967566 24.290150842945874 13.0578559926386 2 33.85853133523941 23.975483913372113 24.63727036708403 17.528714384304447 3 32.5189375267015 23.689161655000166 27.84740707877354 15.944493739524795 4 29.110593512767423 25.505069177429423 26.381700023004374 19.002637286798777 5 26.18780604029051 28.530143941634623 26.05532551184725 19.22672450622761 6 26.297898386407702 34.42275460909001 25.63672812120017 13.642618883302113 7 67.31140523842387 18.2500657267738 10.64979131749318 3.7887377173091457 8 77.38855203917315 7.161342797988761 10.851901146932203 4.598204015905879 9 71.06173387229288 8.25076407374544 13.47665877945381 7.21084327450787 10 41.32139570804167 25.22306023858819 20.09349633573236 13.362047717637779 11 32.401040126195404 25.163495349830754 25.37217785664991 17.063286667323936 12 30.955667291071016 21.971638897104736 28.94299023957409 18.129703572250154 13 25.120362154523647 24.465764566696244 30.300248118571098 20.11362516020901 14 19.903710276381084 27.487552992211377 31.02303723421736 21.58569949719018 15 19.644500312202176 25.47692990239574 35.93981070689145 18.938759078510632 16 22.97171283972526 24.116796477044925 32.98025732031943 19.93123336291038 17 22.679023300141314 24.489385126031088 30.571576456669625 22.260015117157973 18 23.675400111735513 25.591335568043643 30.62908738374577 20.104176936475074 19 25.13782082881462 26.95372835124388 28.012545597949323 19.895905221992177 20 27.70773768444576 25.45988202044103 28.581903776003152 18.25047651911006 21 25.34876269348319 26.7674340267508 28.962092083210095 18.92171119655592 22 23.32027013704032 25.023415163166717 29.2601219231654 22.39619277662756 23 22.7876778730816 26.137894771435143 30.201657957869138 20.872769397614118 24 24.024162805218705 23.84567353511453 30.55843110190936 21.571732557757404 25 22.099600709849156 25.63015544382004 29.26525682736863 23.004987018962176 26 21.18250681915278 26.796805678793255 29.57992375694239 22.44076374511157 27 21.4445923296855 27.91149068322981 29.280661539978308 21.36325544710638 28 19.79218015708699 27.363288310493278 31.24301653028361 21.60151500213612 29 22.73406947319991 26.868694337638438 29.889250386144795 20.507985803016858 30 22.257755759308555 27.098327253606758 30.499482401656312 20.144434585428375 31 24.920922475270302 26.166444838805088 28.30092181800256 20.61171086792205 32 25.491513030332907 27.9572940287226 27.2108843537415 19.340308587202998 33 24.346018600676985 28.242178513917644 26.8076916757041 20.604111209701273 34 22.819514279141607 27.069777186236816 30.18953958394952 19.921168950672055 35 21.60397975615367 27.62640080186664 29.57602122974794 21.193598212231752 36 23.936664037595715 29.000706562818362 27.572587005816818 19.4900423937691 37 23.13479739721976 29.63455913766473 28.546781031253083 18.683862433862434 38 21.669090341450588 29.06746031746032 27.39040060468632 21.873048736402772 39 24.217645995596307 27.193425679450524 27.6911005948273 20.89782773012587 40 24.16691314206842 25.253869663807553 29.50064083604456 21.078576358079467 41 21.922138420585625 26.29851457491209 28.89102500903743 22.888321995464853 42 22.61863682671136 25.819736107003187 29.613608728515562 21.948018337769888 43 22.788704853922244 25.977069571790068 28.140096618357486 23.0941289559302 44 21.648961516973937 26.233609385783296 29.133187091261625 22.984242005981137 45 22.256523382299783 26.605376450096944 27.892799631930064 23.24530053567321 46 22.1669706529955 28.033496007098492 27.540339807420555 22.259193532485458 47 21.08412205461895 26.381289230668116 30.60875316310099 21.92583555161195 48 21.861751947155675 24.735038943113477 30.614504255808605 22.788704853922244 49 21.97595221663545 24.7789937230931 31.281014821387494 21.96403923888396 50 20.277736698544153 25.08955272930428 30.67817706792862 23.954533504222944 51 19.69297380788064 25.507328535278845 28.985096454040555 25.81460120279996 >>END_MODULE >>Per sequence GC content warn #GC Content Count 0 231.0 1 648.0 2 1065.0 3 3755.0 4 6445.0 5 4383.0 6 2321.0 7 2121.0 8 1921.0 9 1865.5 10 1810.0 11 1801.5 12 1793.0 13 1768.5 14 1744.0 15 1687.0 16 1630.0 17 1687.5 18 1745.0 19 1759.5 20 1774.0 21 2010.0 22 2246.0 23 2269.0 24 2292.0 25 3139.5 26 4338.5 27 4690.0 28 5706.0 29 6722.0 30 7834.0 31 8946.0 32 9926.5 33 10907.0 34 12271.0 35 13635.0 36 14894.5 37 16154.0 38 17272.5 39 18391.0 40 21261.0 41 24131.0 42 27172.5 43 30214.0 44 37115.0 45 44016.0 46 43246.0 47 42476.0 48 41317.0 49 40158.0 50 35000.0 51 29842.0 52 27664.0 53 25486.0 54 24525.0 55 23564.0 56 22997.0 57 22430.0 58 22209.5 59 21989.0 60 21814.5 61 21640.0 62 20040.5 63 18441.0 64 14906.0 65 11371.0 66 9426.5 67 7482.0 68 6175.5 69 4869.0 70 4096.0 71 3323.0 72 2630.5 73 1938.0 74 1721.0 75 1177.5 76 851.0 77 598.5 78 346.0 79 261.5 80 177.0 81 121.5 82 66.0 83 53.5 84 41.0 85 29.0 86 17.0 87 18.5 88 20.0 89 16.5 90 13.0 91 8.5 92 4.0 93 4.0 94 4.0 95 3.0 96 2.0 97 1.0 98 0.0 99 0.0 100 0.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 44 0.0 45 0.0 46 0.0 47 0.0 48 0.0 49 0.0 50 0.0 51 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 51 486864.0 >>END_MODULE >>Sequence Duplication Levels fail #Total Deduplicated Percentage 33.4902140615569 #Duplication Level Percentage of deduplicated Percentage of total 1 74.00240925365061 24.783565269756984 2 9.453987832070839 6.3323215246281315 3 3.729776729313947 3.74733063199613 4 2.1720636566814875 2.909715072703642 5 1.359122434148991 2.275865062775699 6 1.0020968011021298 2.0136261827587045 7 0.7582706961741005 1.7776253552033476 8 0.5888971862358469 1.577783426182964 9 0.4819939418183932 1.4527872259084431 >10 6.2789357132374874 46.24147868440272 >50 0.1314746008749053 2.776828035024561 >100 0.03730209606218244 2.11697554377527 >500 6.115097715111876E-4 0.13700847816442446 >1k 0.0030575488575559375 1.8570895067189852 >5k 0.0 0.0 >10k+ 0.0 0.0 >>END_MODULE >>Overrepresented sequences warn #Sequence Count Percentage Possible Source CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 3355 0.6891041440730882 No Hit GAATGATACCTGTCTCTTATACACATCTGACGCGATAAGTGTCGTATGCCG 1667 0.34239541227118864 No Hit GAATGATACGGCTGTCTCTTATACACATCTGACGCGATAAGTGTCGTATGC 1596 0.32781228433402343 No Hit GCTGTCTCTTATACACATCTGACGCGATAAGTGTCGTATGCCGTCTTCTGC 1260 0.2587991718426501 TruSeq Adapter, Index 15 (95% over 22bp) GAATCTGTCTCTTATACACATCTGACGCGATAAGTGTCGTATGCCGTCTTC 1190 0.24442144007361397 No Hit CCTGTCTCTTATACACATCTGACGCGATAAGTGTCGTATGCCGTCTTCTGC 669 0.13741003647835948 TruSeq Adapter, Index 15 (95% over 22bp) CTGTCTCTTATACACATCTGACGCGATAAGTGTCGTATGCCGTCTTCTGCT 499 0.10249268789641461 TruSeq Adapter, Index 21 (95% over 22bp) >>END_MODULE >>Adapter Content fail #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 2.053961681290874E-4 0.0 0.0 0.12303230470932335 0.0 2 2.053961681290874E-4 0.0 0.0 0.7396316014328437 0.0 3 2.053961681290874E-4 0.0 0.0 0.9499572775970292 0.0 4 2.053961681290874E-4 0.0 0.0 1.2859854086562161 0.0 5 2.053961681290874E-4 0.0 0.0 2.289551086134937 0.0 6 2.053961681290874E-4 0.0 0.0 2.732796016957508 0.0 7 2.053961681290874E-4 0.0 0.0 3.2481350027933877 0.0 8 2.053961681290874E-4 0.0 0.0 4.036650892240955 0.0 9 2.053961681290874E-4 0.0 0.0 4.297298629596766 0.0 10 4.107923362581748E-4 0.0 0.0 5.280735482598836 0.0 11 4.107923362581748E-4 0.0 0.0 6.216931216931217 0.0 12 4.107923362581748E-4 0.0 0.0 7.314773735581189 0.0 13 4.107923362581748E-4 0.0 0.0 7.640532058233922 0.0 14 4.107923362581748E-4 0.0 0.0 7.793757599658221 0.0 15 4.107923362581748E-4 0.0 0.0 8.123418449505406 0.0 16 4.107923362581748E-4 0.0 0.0 8.73036412632686 0.0 17 4.107923362581748E-4 0.0 0.0 9.383729337145486 0.0 18 4.107923362581748E-4 0.0 0.0 10.112885734003747 0.0 19 4.107923362581748E-4 0.0 0.0 10.595566729107102 0.0 20 4.107923362581748E-4 0.0 0.0 11.056270334220645 0.0 21 4.107923362581748E-4 0.0 0.0 11.583522297808011 0.0 22 4.107923362581748E-4 0.0 0.0 12.130286897367643 0.0 23 4.107923362581748E-4 0.0 0.0 12.678489270104176 0.0 24 4.107923362581748E-4 0.0 0.0 13.129333859147524 0.0 25 4.107923362581748E-4 0.0 0.0 13.495966019257946 0.0 26 4.107923362581748E-4 0.0 0.0 13.858695652173912 0.0 27 4.107923362581748E-4 0.0 0.0 14.217933550231686 0.0 28 4.107923362581748E-4 0.0 0.0 14.599765026783661 0.0 29 4.107923362581748E-4 0.0 0.0 15.015281474908804 0.0 30 4.107923362581748E-4 0.0 0.0 15.47968221104867 0.0 31 4.107923362581748E-4 0.0 0.0 15.906084656084657 0.0 32 4.107923362581748E-4 0.0 0.0 16.340292155509548 0.0 33 4.107923362581748E-4 0.0 0.0 16.7473873607414 0.0 34 4.107923362581748E-4 0.0 0.0 17.167011732229124 0.0 35 4.107923362581748E-4 0.0 0.0 17.573490748956587 0.0 36 4.107923362581748E-4 0.0 0.0 18.001330967169476 0.0 37 4.107923362581748E-4 0.0 0.0 18.433073712576817 0.0 38 6.161885043872621E-4 0.0 0.0 18.878988793585066 0.0 39 6.161885043872621E-4 0.0 0.0 19.346675868414998 0.0 >>END_MODULE >>Kmer Content fail #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position AACGAGT 35 1.2099918E-7 45.000004 30 GCGCCTA 25 3.8874816E-5 45.0 41 TCCGTGA 25 3.8874816E-5 45.0 36 CCCTTCG 20 7.0292765E-4 45.0 39 CTCGACG 25 3.8874816E-5 45.0 1 CGATGCA 20 7.0292765E-4 45.0 10 TATACGG 20 7.0292765E-4 45.0 2 TACGTTG 20 7.0292765E-4 45.0 1 ATATTCG 20 7.0292765E-4 45.0 16 TACGAAT 100 0.0 42.75 12 CGAATAT 100 0.0 42.75 14 CGTTTTT 1720 0.0 40.944767 1 GCTACGA 110 0.0 40.909092 10 AGCTACG 110 0.0 40.909092 9 CGTTTTA 105 0.0 40.714287 1 ACCTATG 100 0.0 40.5 34 CGTGCGG 40 3.452751E-7 39.375 2 GTAGCCG 35 6.240871E-6 38.57143 43 CCTATGC 105 0.0 38.57143 35 CTGTCCG 30 1.1389554E-4 37.500004 1 >>END_MODULE