##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR2936611.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 731474 Sequences flagged as poor quality 0 Sequence length 51 %GC 48 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 31.116503115626802 31.0 31.0 33.0 28.0 34.0 2 31.16980234430752 31.0 31.0 34.0 28.0 34.0 3 30.971513683329825 31.0 31.0 34.0 27.0 34.0 4 34.92785662921717 35.0 35.0 37.0 32.0 37.0 5 35.14799842509782 35.0 35.0 37.0 33.0 37.0 6 35.10563191583023 36.0 35.0 37.0 32.0 37.0 7 31.102655733491552 35.0 35.0 37.0 0.0 37.0 8 33.11215983069801 35.0 35.0 37.0 17.0 37.0 9 36.36303682700957 39.0 35.0 39.0 32.0 39.0 10 36.06618553769512 37.0 35.0 39.0 32.0 39.0 11 36.27688885729363 37.0 35.0 39.0 32.0 39.0 12 36.30562672084039 38.0 35.0 39.0 32.0 39.0 13 36.20288622698825 38.0 35.0 39.0 32.0 39.0 14 37.087526009126776 39.0 36.0 40.0 31.0 41.0 15 37.33460792864818 39.0 36.0 41.0 32.0 41.0 16 37.294652988349554 39.0 36.0 40.0 32.0 41.0 17 37.24682217002928 39.0 36.0 40.0 32.0 41.0 18 37.18895271738982 39.0 36.0 40.0 32.0 41.0 19 37.01787213216054 39.0 35.0 40.0 32.0 41.0 20 36.97581868938609 39.0 35.0 40.0 31.0 41.0 21 36.972767316404955 39.0 35.0 40.0 31.0 41.0 22 37.092614364967176 39.0 35.0 40.0 32.0 41.0 23 37.15418456431807 39.0 35.0 40.0 32.0 41.0 24 37.09759335260036 39.0 35.0 40.0 32.0 41.0 25 36.76264774961243 39.0 35.0 40.0 31.0 41.0 26 36.75293448570967 39.0 35.0 40.0 31.0 41.0 27 36.77968321498782 39.0 35.0 40.0 31.0 41.0 28 36.77030762542483 39.0 35.0 40.0 31.0 41.0 29 36.74069071491263 39.0 35.0 40.0 31.0 41.0 30 36.484111533697714 38.0 35.0 40.0 30.0 41.0 31 36.43082050763253 38.0 35.0 40.0 30.0 41.0 32 36.32023284491315 38.0 35.0 40.0 30.0 41.0 33 36.2057407371964 38.0 35.0 40.0 30.0 41.0 34 36.13401706690873 38.0 35.0 40.0 30.0 41.0 35 36.027992792635146 38.0 35.0 40.0 29.0 41.0 36 35.94552779729697 38.0 35.0 40.0 29.0 41.0 37 35.84399582213449 38.0 35.0 40.0 29.0 41.0 38 35.66400172801767 38.0 35.0 40.0 28.0 41.0 39 35.58911731654167 38.0 34.0 40.0 27.0 41.0 40 35.47533200086401 38.0 34.0 40.0 27.0 41.0 41 35.28043512141238 38.0 34.0 40.0 26.0 41.0 42 35.31468377549988 38.0 34.0 40.0 27.0 41.0 43 35.29131725802968 38.0 34.0 40.0 27.0 41.0 44 35.08529489769971 38.0 34.0 40.0 26.0 41.0 45 34.9920776404903 38.0 34.0 40.0 26.0 41.0 46 34.939507077490106 37.0 34.0 40.0 26.0 41.0 47 34.875910832100665 37.0 34.0 40.0 26.0 41.0 48 34.77254557236484 37.0 34.0 40.0 25.0 41.0 49 34.70328678804715 37.0 34.0 40.0 25.0 41.0 50 34.52170548782322 37.0 33.0 40.0 24.0 41.0 51 32.834911425423186 35.0 31.0 39.0 20.0 40.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 7 2.0 8 30.0 9 75.0 10 64.0 11 61.0 12 39.0 13 25.0 14 42.0 15 76.0 16 129.0 17 277.0 18 461.0 19 762.0 20 1276.0 21 1976.0 22 2761.0 23 3868.0 24 5523.0 25 7491.0 26 9315.0 27 10802.0 28 12627.0 29 14530.0 30 18244.0 31 22775.0 32 29144.0 33 40335.0 34 58939.0 35 63016.0 36 74305.0 37 107774.0 38 137843.0 39 106883.0 40 4.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 43.78665543819739 20.52636183924514 24.7850231177048 10.901959604852667 2 34.279960736813614 23.254141637296748 25.749377284770205 16.71652034111944 3 34.40669114691705 22.604631196734264 27.04853487615418 15.94014278019451 4 29.885682881414787 25.36522145694857 25.775762364759373 18.973333296877264 5 26.571005941427856 29.449850575686902 24.947571615669183 19.03157186721606 6 27.217918887069125 34.902402546091864 24.564509469919642 13.315169096919371 7 70.31186344285648 17.645329840841917 8.61014882278796 3.432657893513645 8 81.80673544104097 5.807178382280163 8.408501190746357 3.977584985932514 9 75.576848937898 7.131900792099241 10.835244998455174 6.456005271547588 10 44.963730768284314 23.465358987469138 17.49987012525394 14.07104011899261 11 32.93213429322163 25.78792957781138 23.520863352627707 17.759072776339284 12 29.653412151354665 23.079972767316406 28.635467562756844 18.63114751857209 13 26.761443332230538 23.00669606848637 31.055922698551147 19.175937900731945 14 22.433469952452175 25.631259620984476 32.150698452713286 19.784571973850063 15 21.249422399155677 25.101644077574868 34.25261868501136 19.396314838258093 16 26.83663397468673 23.810825811990583 29.32435055791457 20.02818965540812 17 26.18958431878645 24.052666260181496 27.489015330688442 22.26873409034361 18 26.32793510090584 24.234080773889435 29.930797266888504 19.50718685831622 19 25.943642562825197 25.899075018387528 27.418336126779625 20.738946292007647 20 25.732561922911817 26.985374736490975 27.724977237741875 19.55708610285533 21 26.199290747176253 25.681705706559633 29.752937219914855 18.366066326349262 22 24.834648941725884 23.032260886921478 30.080905131282858 22.052185040069777 23 23.669604114431955 24.2883547467169 30.34270527728942 21.69933586156172 24 24.353018699229228 25.327626135720475 29.536388169641025 20.782966995409268 25 24.48152634269981 24.815099374687275 28.418234961187956 22.285139321424957 26 22.64523414366061 25.990260761148036 27.75751427938655 23.6069908158048 27 22.3160358399615 26.33094272660409 29.671184485026124 21.681836948408282 28 21.384902265835834 26.300593049103593 29.376027035820822 22.938477649239754 29 23.698176558565308 26.08705162452801 28.568069405064296 21.64670241184239 30 24.641340635483967 24.662530725630713 28.880725767423037 21.81540287146228 31 25.274582555224107 25.52394206766064 27.543426013774923 21.65804936334032 32 26.184115908425998 25.792030885581717 26.99972931368716 21.024123892305127 33 25.454766676600943 24.799787825678017 27.49380018975384 22.2516453079672 34 23.658940714229075 26.059846282984765 29.109715451266894 21.171497551519263 35 23.7843040217424 25.774395262169264 28.53826656859984 21.903034147488494 36 25.690591873395363 25.6812955757826 27.595922753235246 21.03218979758679 37 22.956249982911217 27.283403101135516 27.71773159401428 22.04261532193899 38 23.133016347812774 26.924401960971956 27.783352518339683 22.15922917287559 39 23.31566125385181 24.88318108367488 28.47114183142531 23.330015831047994 40 25.210875574524866 24.192384144891 28.526646196583883 22.070094084000253 41 22.075699204619713 24.97969852653683 28.3932169837889 24.55138528505456 42 22.19586752229061 24.891110278697536 30.068054366935804 22.844967832076055 43 22.619122484189457 24.590074288354746 29.535157777309923 23.25564545014587 44 22.750501043099273 24.976007349543526 28.866371190226857 23.407120417130344 45 22.245356636052684 25.150449640041888 27.6573056595313 24.946888064374125 46 23.836937471461734 25.274582555224107 27.940022475166582 22.948457498147576 47 21.608833670096274 25.27800031169939 30.297454181556695 22.815711836647644 48 21.617583126672994 26.37250264534351 28.740324331418478 23.26958989656502 49 23.374856796003684 24.514063384344485 29.45518227578834 22.65589754386349 50 22.157315229249434 25.171366309670614 28.89220942917998 23.779109031899974 51 21.889636542105393 25.29659290692492 28.123350932500678 24.690419618469008 >>END_MODULE >>Per sequence GC content warn #GC Content Count 0 243.0 1 674.5 2 1106.0 3 2903.5 4 4701.0 5 3267.5 6 1834.0 7 1778.0 8 1722.0 9 1685.0 10 1648.0 11 1706.5 12 1765.0 13 1791.0 14 1817.0 15 1812.5 16 1808.0 17 1875.5 18 1943.0 19 1852.0 20 1761.0 21 2007.0 22 2253.0 23 2711.0 24 3169.0 25 4188.0 26 5647.5 27 6088.0 28 7283.0 29 8478.0 30 10409.5 31 12341.0 32 14188.5 33 16036.0 34 17752.5 35 19469.0 36 21502.5 37 23536.0 38 26379.0 39 29222.0 40 31621.0 41 34020.0 42 37654.0 43 41288.0 44 49321.0 45 57354.0 46 57920.0 47 58486.0 48 58562.5 49 58639.0 50 54096.0 51 49553.0 52 46371.5 53 43190.0 54 42615.0 55 42040.0 56 41082.5 57 40125.0 58 39662.5 59 39200.0 60 35747.5 61 32295.0 62 28882.5 63 25470.0 64 22595.5 65 19721.0 66 17401.5 67 15082.0 68 12902.0 69 10722.0 70 8767.0 71 6812.0 72 5798.5 73 4785.0 74 3939.5 75 2410.0 76 1726.0 77 1329.0 78 932.0 79 638.5 80 345.0 81 293.0 82 241.0 83 163.0 84 85.0 85 64.0 86 43.0 87 41.5 88 40.0 89 30.5 90 21.0 91 17.0 92 13.0 93 8.5 94 4.0 95 2.0 96 0.0 97 0.5 98 1.0 99 0.5 100 0.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 44 0.0 45 0.0 46 0.0 47 0.0 48 0.0 49 0.0 50 0.0 51 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 51 731474.0 >>END_MODULE >>Sequence Duplication Levels fail #Total Deduplicated Percentage 31.53182635178719 #Duplication Level Percentage of deduplicated Percentage of total 1 73.7286168674435 23.247979442216767 2 8.85614715276057 5.585009883334417 3 3.8479441773242447 3.6399812283227613 4 2.2470045801190066 2.834086329279321 5 1.556707264510382 2.4542911572553514 6 1.082635557847544 2.0482485847391407 7 0.8413734446314554 1.857102894718686 8 0.6180154843467695 1.5589725548110391 9 0.48369736758128723 1.3726675261250754 >10 6.44804472357111 47.3833413244412 >50 0.2569880194349498 4.837875341449801 >100 0.029801971968561575 1.7183085078203153 >500 4.319126372255301E-4 0.12202618871419532 >1k 0.0025914758233531805 1.3401090367719664 >5k 0.0 0.0 >10k+ 0.0 0.0 >>END_MODULE >>Overrepresented sequences warn #Sequence Count Percentage Possible Source CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 2525 0.34519340400342324 No Hit GAATGATACGGCTGTCTCTTATACACATCTGACGCGCATGATTTCGTATGC 1646 0.22502508633252855 No Hit GAATGATACCTGTCTCTTATACACATCTGACGCGCATGATTTCGTATGCCG 1520 0.20779959369711024 No Hit GGGGTTGGGGATTTAGCTCAGTGGTAGAGCGCTTGCCTAGCAAGCGCAAGG 1498 0.20479196799886257 No Hit GCTGTCTCTTATACACATCTGACGCGCATGATTTCGTATGCCGTCTTCTGC 1382 0.18893357795355678 Illumina PCR Primer Index 5 (95% over 23bp) GAATCTGTCTCTTATACACATCTGACGCGCATGATTTCGTATGCCGTCTTC 1269 0.17348531868528477 No Hit GGGGTTGGGGATTTAGCTCAGTGGTAGAGCTGTCTCTTATACACATCTGAC 896 0.12249239207408602 No Hit >>END_MODULE >>Adapter Content fail #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.07286656805299983 0.0 2 0.0 0.0 0.0 0.44089058531130293 0.0 3 0.0 0.0 0.0 0.5672108646377041 0.0 4 0.0 0.0 0.0 0.8023525101370657 0.0 5 0.0 0.0 0.0 1.5445525063091785 0.0 6 0.0 0.0 0.0 1.926110839209596 0.0 7 0.0 0.0 0.0 2.3131375824704636 0.0 8 0.0 0.0 0.0 2.954308697233258 0.0 9 0.0 0.0 0.0 3.1940984915390023 0.0 10 0.0 0.0 0.0 3.9447745237698126 0.0 11 0.0 0.0 0.0 4.732909166969708 0.0 12 0.0 0.0 0.0 5.546335208086686 0.0 13 0.0 0.0 0.0 5.808272064352253 0.0 14 1.3671025901125673E-4 0.0 0.0 5.93090116668535 0.0 15 2.7342051802251347E-4 0.0 0.0 6.173151745653297 0.0 16 2.7342051802251347E-4 0.0 0.0 6.604746033351835 0.0 17 2.7342051802251347E-4 0.0 0.0 7.072158408911322 0.0 18 2.7342051802251347E-4 0.0 0.0 7.6287058733461475 0.0 19 2.7342051802251347E-4 0.0 0.0 7.9588611488583325 0.0 20 2.7342051802251347E-4 0.0 0.0 8.302140609235598 0.0 21 2.7342051802251347E-4 0.0 0.0 8.728403196832696 0.0 22 2.7342051802251347E-4 0.0 0.0 9.14974421510539 0.0 23 2.7342051802251347E-4 0.0 0.0 9.579287848918758 0.0 24 2.7342051802251347E-4 0.0 0.0 9.920790075928878 0.0 25 2.7342051802251347E-4 0.0 0.0 10.243152866677422 0.0 26 2.7342051802251347E-4 0.0 0.0 10.55416870592803 0.0 27 2.7342051802251347E-4 0.0 0.0 10.897174745787273 0.0 28 4.1013077703377015E-4 0.0 0.0 11.22104134938494 0.0 29 4.1013077703377015E-4 0.0 0.0 11.593166674413581 0.0 30 4.1013077703377015E-4 0.0 0.0 12.102412389230512 0.0 31 5.468410360450269E-4 0.0 0.0 12.516507763775609 0.0 32 5.468410360450269E-4 0.0 0.0 12.868810101247618 0.0 33 5.468410360450269E-4 0.0 0.0 13.205664179451354 0.0 34 5.468410360450269E-4 0.0 0.0 13.60540497680027 0.0 35 5.468410360450269E-4 0.0 0.0 14.027156125849997 0.0 36 5.468410360450269E-4 0.0 0.0 14.416917074291089 0.0 37 5.468410360450269E-4 0.0 0.0 14.785487932585436 0.0 38 5.468410360450269E-4 0.0 0.0 15.230616535926089 0.0 39 5.468410360450269E-4 0.0 0.0 15.929342669732621 0.0 >>END_MODULE >>Kmer Content warn #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position TTATCGT 20 7.0316024E-4 45.0 42 CGTTAGG 40 6.8084773E-9 45.0 2 AAACGCG 25 3.8894097E-5 45.0 1 GTATGCG 40 6.8084773E-9 45.0 1 TTCGGAC 25 3.8894097E-5 45.0 14 ATAACGC 35 1.2111195E-7 45.0 11 CCCGCGA 25 3.8894097E-5 45.0 29 ATCGATC 20 7.0316024E-4 45.0 12 AACCCGC 90 0.0 40.0 21 CGGCTAG 40 3.4559162E-7 39.375 2 CGTTTTT 1100 0.0 39.068184 1 CCATACG 75 0.0 39.0 2 CTATGCG 35 6.2451745E-6 38.571426 1 CTCGTAC 35 6.2451745E-6 38.571426 29 CGACAAT 70 0.0 38.571426 20 TCGACAA 70 0.0 38.571426 19 CTACGGG 100 0.0 38.25 3 ACGGGAC 145 0.0 37.24138 5 ACGGGAT 135 0.0 36.666664 5 TTACACG 80 0.0 36.5625 34 >>END_MODULE