SRR2936609.fastq FastQC Report

Basic Statistics

Measure	Value
Filename	SRR2936609.fastq
File type	Conventional base calls
Encoding	Sanger / Illumina 1.9
Total Sequences	238179
Sequences flagged as poor quality	0
Sequence length	51
%GC	44

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
GAATGATACCTGTCTCTTATACACATCTGACGCCGTCGCATTCGTATGCCG	8387	3.521301206235646	No Hit
GAATGATACGGCTGTCTCTTATACACATCTGACGCCGTCGCATTCGTATGC	6823	2.8646522153506395	No Hit
GAATCTGTCTCTTATACACATCTGACGCCGTCGCATTCGTATGCCGTCTTC	5671	2.3809823704020925	No Hit
CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	2658	1.1159674026677415	No Hit
GCTGTCTCTTATACACATCTGACGCCGTCGCATTCGTATGCCGTCTTCTGC	1621	0.6805805717548566	No Hit
GAATGACTGTCTCTTATACACATCTGACGCCGTCGCATTCGTATGCCGTCT	1465	0.6150836135847408	No Hit
GAATGATCTGTCTCTTATACACATCTGACGCCGTCGCATTCGTATGCCGTC	1178	0.4945860046435664	No Hit
GAATGATACGGCGACTGTCTCTTATACACATCTGACGCCGTCGCATTCGTA	1076	0.4517610704554138	No Hit
GAACTGTCTCTTATACACATCTGACGCCGTCGCATTCGTATGCCGTCTTCT	1018	0.4274096372896015	No Hit
GAATGAAACCTGTCTCTTATACACATCTGACGCCGTCGCATTCGTATGCCG	804	0.33756124595367354	No Hit
GAATGAAACGGCTGTCTCTTATACACATCTGACGCCGTCGCATTCGTATGC	743	0.3119502558999744	No Hit
GAATCTATCTCTTATACACATCTGACGCCGTCGCATTCGTATGCCGTCTTC	635	0.2666062079360481	No Hit
GAATGATACGGCGACCACCTGTCTCTTATACACATCTGACGCCGTCGCATT	370	0.15534534950604378	No Hit
GAATGCTGTCTCTTATACACATCTGACGCCGTCGCATTCGTATGCCGTCTT	357	0.14988726965853413	No Hit
GAATGATACGGCGACCTGTCTCTTATACACATCTGACGCCGTCGCATTCGT	241	0.10118440332690959	No Hit

Adapter graph

Kmer graph

Sequence	Count	PValue	Obs/Exp Max	Max Obs/Exp Position
GCGACCT	45	3.8198777E-10	45.000004	11
CTCGTAC	45	3.8198777E-10	45.000004	29
TACGCTG	30	2.158231E-6	45.000004	1
TCTCGTA	45	3.8198777E-10	45.000004	28
GTACGGT	45	3.8198777E-10	45.000004	32
CGGGTCA	20	7.0220145E-4	45.0	6
CGGCGAA	25	3.8814644E-5	45.0	31
TCCATAG	20	7.0220145E-4	45.0	13
ACCGCGG	20	7.0220145E-4	45.0	2
ACCGAGG	55	1.8189894E-12	45.0	17
CACGCGG	25	3.8814644E-5	45.0	2
GTGTGAT	20	7.0220145E-4	45.0	9
ATATCGG	20	7.0220145E-4	45.0	2
CGGGAAC	25	3.8814644E-5	45.0	6
GGACCGT	20	7.0220145E-4	45.0	8
ACCTTCG	20	7.0220145E-4	45.0	21
CACCCGT	20	7.0220145E-4	45.0	16
TGCAACG	20	7.0220145E-4	45.0	1
CGAAGCG	20	7.0220145E-4	45.0	3
CGACCAC	510	0.0	44.11765	12