SRR2936608.fastq FastQC Report

Basic Statistics

Measure	Value
Filename	SRR2936608.fastq
File type	Conventional base calls
Encoding	Sanger / Illumina 1.9
Total Sequences	443326
Sequences flagged as poor quality	0
Sequence length	51
%GC	45

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	3454	0.7791106319051894	No Hit
GAATGATACGGCTGTCTCTTATACACATCTGACGCCAGCGTAGTCGTATGC	1528	0.34466735539986376	No Hit
GAATGATACCTGTCTCTTATACACATCTGACGCCAGCGTAGTCGTATGCCG	1306	0.2945913391048574	No Hit
GAATCTGTCTCTTATACACATCTGACGCCAGCGTAGTCGTATGCCGTCTTC	1071	0.2415829434772605	No Hit
GCTGTCTCTTATACACATCTGACGCCAGCGTAGTCGTATGCCGTCTTCTGC	915	0.20639439148617497	No Hit

Adapter graph

Kmer graph

Sequence	Count	PValue	Obs/Exp Max	Max Obs/Exp Position
TCTGCGA	25	3.8869148E-5	45.0	29
ACGCACG	20	7.028593E-4	45.0	1
TAGCGGT	20	7.028593E-4	45.0	39
TAGCGGC	20	7.028593E-4	45.0	3
CACGACA	20	7.028593E-4	45.0	34
ATCACTA	20	7.028593E-4	45.0	26
TAACGCC	20	7.028593E-4	45.0	12
TCGATCA	20	7.028593E-4	45.0	17
ATCCGTT	20	7.028593E-4	45.0	16
TGTTGCG	20	7.028593E-4	45.0	1
TACGCAA	20	7.028593E-4	45.0	41
CTACGCA	20	7.028593E-4	45.0	40
CCTTTCG	35	1.2096643E-7	45.0	11
GGACGTA	25	3.8869148E-5	45.0	8
CGTAATC	20	7.028593E-4	45.0	21
ATAACGC	20	7.028593E-4	45.0	11
TAGTGCG	35	1.2096643E-7	45.0	1
GCGTATT	20	7.028593E-4	45.0	31
AAATGCG	25	3.8869148E-5	45.0	33
CAACACG	30	2.1624728E-6	44.999996	22