##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR2936607.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 571279 Sequences flagged as poor quality 0 Sequence length 51 %GC 48 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 31.20385835992571 31.0 31.0 33.0 30.0 34.0 2 31.243285680026748 31.0 31.0 34.0 28.0 34.0 3 31.005746754212915 31.0 31.0 34.0 28.0 34.0 4 34.99079258996042 35.0 35.0 37.0 32.0 37.0 5 35.20408416903124 35.0 35.0 37.0 33.0 37.0 6 35.16461133701746 36.0 35.0 37.0 32.0 37.0 7 30.67477012107919 35.0 35.0 37.0 0.0 37.0 8 32.805909196732244 35.0 35.0 37.0 17.0 37.0 9 36.07406538661495 39.0 34.0 39.0 32.0 39.0 10 36.13451045811241 37.0 35.0 39.0 32.0 39.0 11 36.371214415373224 37.0 35.0 39.0 32.0 39.0 12 36.380689645514714 38.0 35.0 39.0 32.0 39.0 13 36.20761834410157 38.0 35.0 39.0 32.0 39.0 14 37.3119509031489 39.0 36.0 40.0 32.0 41.0 15 37.37528948202192 39.0 36.0 41.0 32.0 41.0 16 37.4489032504258 39.0 36.0 40.0 33.0 41.0 17 37.215288851856975 39.0 35.0 40.0 32.0 41.0 18 37.160200182397745 39.0 35.0 40.0 32.0 41.0 19 36.953432560972836 39.0 35.0 40.0 31.0 41.0 20 36.87990106410353 39.0 35.0 40.0 31.0 41.0 21 36.99482564561274 39.0 35.0 40.0 32.0 41.0 22 37.07148521125404 39.0 35.0 40.0 32.0 41.0 23 37.15081772653992 39.0 35.0 40.0 32.0 41.0 24 37.07541323941542 39.0 35.0 40.0 32.0 41.0 25 36.8459124175753 39.0 35.0 40.0 31.0 41.0 26 36.72959272089469 38.0 35.0 40.0 31.0 41.0 27 36.770702231309045 39.0 35.0 40.0 31.0 41.0 28 36.70910710878572 39.0 35.0 40.0 31.0 41.0 29 36.65885845620091 39.0 35.0 40.0 31.0 41.0 30 36.4670047384903 38.0 35.0 40.0 31.0 41.0 31 36.46802175469429 38.0 35.0 40.0 31.0 41.0 32 36.26853253839192 38.0 35.0 40.0 30.0 41.0 33 36.13502159190168 38.0 35.0 40.0 30.0 41.0 34 35.986451453667996 38.0 35.0 40.0 30.0 41.0 35 35.912116496492956 38.0 35.0 40.0 29.0 41.0 36 35.86508168513108 38.0 35.0 40.0 29.0 41.0 37 35.78797050127871 38.0 35.0 40.0 29.0 41.0 38 35.67891695651337 38.0 35.0 40.0 29.0 41.0 39 35.60308710805053 38.0 35.0 40.0 28.0 41.0 40 35.509633646607 38.0 35.0 40.0 28.0 41.0 41 35.339067250852914 38.0 34.0 40.0 27.0 41.0 42 35.36888455553241 38.0 34.0 40.0 27.0 41.0 43 35.29708601226371 38.0 34.0 40.0 27.0 41.0 44 35.129933009965356 38.0 34.0 40.0 26.0 41.0 45 35.05084380836684 38.0 34.0 40.0 26.0 41.0 46 34.88088482160205 37.0 34.0 40.0 25.0 41.0 47 34.818325196620215 37.0 34.0 40.0 25.0 41.0 48 34.72272917436139 37.0 34.0 40.0 25.0 41.0 49 34.61694898639719 37.0 34.0 40.0 24.0 41.0 50 34.4784912450834 37.0 34.0 40.0 24.0 41.0 51 32.6688115614262 35.0 31.0 39.0 20.0 40.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 7 4.0 8 14.0 9 37.0 10 47.0 11 28.0 12 30.0 13 21.0 14 34.0 15 47.0 16 108.0 17 160.0 18 361.0 19 586.0 20 1024.0 21 1603.0 22 2264.0 23 3116.0 24 4229.0 25 5634.0 26 7159.0 27 8409.0 28 9298.0 29 10955.0 30 13359.0 31 17384.0 32 23017.0 33 32660.0 34 50959.0 35 52275.0 36 57075.0 37 82443.0 38 105264.0 39 81673.0 40 2.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 45.42351460494785 19.43113609987414 22.28665853287098 12.858690762307035 2 32.441766632416034 28.244868094223662 23.366341139793338 15.947024133566961 3 30.976283042086266 28.116559509451598 26.521016876167337 14.386140572294797 4 28.235765711675032 23.066312607324967 30.907314989698552 17.79060669130145 5 29.75761405547902 27.626781310007893 24.008234155290147 18.607370479222936 6 25.561065608923133 36.96985185872402 24.034315982208344 13.4347665501445 7 64.36924865083435 18.704170816711276 13.4755522257951 3.4510283066592677 8 74.89545388505441 10.449010028374929 10.378991701077757 4.276544385492903 9 68.81576252584114 7.778160933624376 12.085513383128035 11.32056315740645 10 43.823770872025754 23.774723033754086 18.586364981033785 13.815141113186376 11 35.87476521979628 23.549614111493682 23.538411179126136 17.037209489583898 12 33.170307327943085 19.588677336292776 27.498647771054074 19.74236756471006 13 26.223438985154363 22.263027347408183 30.723691926361724 20.789841741075726 14 20.790541924348698 27.279140314977447 27.933461583569496 23.996856177104355 15 19.945420713871854 24.464928695085938 36.31745609413264 19.272194496909567 16 23.20424871210039 23.560992089679473 30.762026960556927 22.47273223766321 17 22.258651201952112 24.183980156806044 30.512236577924273 23.04513206331757 18 23.39539874562167 25.245282952812897 28.613689633261508 22.74562866830393 19 25.40194896014032 27.645686258378134 25.915883482501545 21.036481298980007 20 28.24714368986082 25.16878793024074 29.25033127421102 17.333737105687412 21 25.82030846574091 28.834597455884076 26.410562964856048 18.93453111351896 22 22.96111007056097 24.026789012023897 29.125698651622063 23.886402265793073 23 24.030289928388758 27.58161948890122 28.59706028052843 19.791030302181596 24 26.29783345790761 22.22749304630487 27.4893703426872 23.985303153100325 25 22.41794289655317 27.974422305038342 26.848352556281608 22.759282242126876 26 21.708132103578112 25.63370962349395 29.09314012942888 23.56501814349906 27 23.998081497832057 26.90961859266663 26.87355915410859 22.218740755392723 28 19.75969710071611 27.562014357258015 31.028621741740903 21.649666800284976 29 24.270277745199806 25.28956954482836 29.216897522926626 21.223255187045208 30 25.348559985576223 24.604090120589063 29.581342916508397 20.466006977326316 31 27.958493135578237 24.017511583657022 25.8141818621024 22.209813418662335 32 27.93293644611477 27.03057525307249 26.622893542384716 18.41359475842802 33 27.340756442998952 24.595862967131644 25.31232550119994 22.75105508866946 34 26.054869862186425 24.84250252503593 29.54808421104224 19.554543401735405 35 24.46562887835891 23.89340409852279 27.22662656950457 24.414340453613733 36 24.67340826461326 28.272350287687804 27.438782101214994 19.615459346483945 37 25.913957978500875 26.640398124209014 28.318212292067447 19.127431605222668 38 27.235903997871443 26.683284349678527 24.087529910954192 21.99328174149584 39 26.841700815188375 23.710656264277176 28.118835105088756 21.328807815445693 40 26.22623971824625 23.501126419840393 27.864843622818274 22.407790239095082 41 22.34529888198236 26.234291825885425 28.966231911202755 22.45417738092946 42 22.2329194666704 24.855981053040633 28.679506860920846 24.23159261936812 43 23.85576924760056 24.728022559905057 27.760866406781975 23.655341785712412 44 24.085779452771764 24.49206079691359 27.995427803227496 23.426731947087152 45 23.643788761708375 23.440210475091856 26.877235116291686 26.03876564690808 46 24.92267350979119 27.638684425648414 25.32615412084113 22.11248794371927 47 21.83801610071436 24.77300933519349 31.741933451080822 21.64704111301133 48 23.619282347154368 24.33329423976726 27.832110054806847 24.21531335827153 49 22.021814209869433 23.072089119326982 31.09041291558065 23.81568375522293 50 21.32740744889975 24.118688066601432 28.78593471841254 25.767969766086274 51 20.958410864043664 23.74741588610819 27.522278956516864 27.77189429333128 >>END_MODULE >>Per sequence GC content fail #GC Content Count 0 236.0 1 675.0 2 1114.0 3 4009.5 4 6905.0 5 4731.0 6 2557.0 7 2315.5 8 2074.0 9 2005.5 10 1937.0 11 1873.5 12 1810.0 13 1859.5 14 1909.0 15 1823.0 16 1737.0 17 1756.5 18 1776.0 19 1665.0 20 1554.0 21 1859.5 22 2165.0 23 2248.5 24 2332.0 25 2805.5 26 4093.0 27 4907.0 28 5691.5 29 6476.0 30 7688.5 31 8901.0 32 10069.5 33 11238.0 34 12789.5 35 14341.0 36 15134.0 37 15927.0 38 17259.5 39 18592.0 40 20445.5 41 22299.0 42 24105.5 43 25912.0 44 27755.5 45 29599.0 46 31922.0 47 34245.0 48 50308.0 49 66371.0 50 53135.5 51 39900.0 52 39348.0 53 38796.0 54 35879.5 55 32963.0 56 33244.5 57 33526.0 58 33139.0 59 32752.0 60 32559.5 61 32367.0 62 28980.0 63 25593.0 64 21030.0 65 16467.0 66 13143.5 67 9820.0 68 8519.5 69 7219.0 70 5980.5 71 4742.0 72 3654.0 73 2566.0 74 2250.0 75 1547.0 76 1160.0 77 868.5 78 577.0 79 430.0 80 283.0 81 260.0 82 237.0 83 153.5 84 70.0 85 66.0 86 62.0 87 46.0 88 30.0 89 23.5 90 17.0 91 9.0 92 1.0 93 1.5 94 2.0 95 2.0 96 2.0 97 1.0 98 0.0 99 0.0 100 0.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 44 0.0 45 0.0 46 0.0 47 0.0 48 0.0 49 0.0 50 0.0 51 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 51 571279.0 >>END_MODULE >>Sequence Duplication Levels fail #Total Deduplicated Percentage 29.84096372674178 #Duplication Level Percentage of deduplicated Percentage of total 1 73.38416442883128 21.898541888380084 2 8.488377707353337 5.066027425280289 3 3.6254590376199554 3.2456157490321575 4 2.23356672008385 2.666071339011191 5 1.5380250943061153 2.2948075525003695 6 1.1306247877660995 2.024335996816998 7 0.90479114181362 1.889988775019626 8 0.7230538437797527 1.7261298819770252 9 0.5955505021022952 1.59946208376097 >10 7.156416051205759 45.618546914384055 >50 0.16731812752517108 3.1036497814962942 >100 0.044462159761933545 2.380547216811984 >500 0.003510170507521069 0.8845873238182987 >1k 0.002925142089600891 1.6387647935035266 >5k 0.0017550852537605345 3.9629232782071013 >10k+ 0.0 0.0 >>END_MODULE >>Overrepresented sequences fail #Sequence Count Percentage Possible Source GAATGATACCTGTCTCTTATACACATCTGACGCTGGTGGCTTCGTATGCCG 8546 1.4959415627040378 No Hit GAATGATACGGCTGTCTCTTATACACATCTGACGCTGGTGGCTTCGTATGC 8255 1.4450032295953465 No Hit GAATCTGTCTCTTATACACATCTGACGCTGGTGGCTTCGTATGCCGTCTTC 5899 1.032595281815015 No Hit CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 3373 0.5904295449333863 No Hit GCTGTCTCTTATACACATCTGACGCTGGTGGCTTCGTATGCCGTCTTCTGC 2213 0.3873763957715932 No Hit GAATGACTGTCTCTTATACACATCTGACGCTGGTGGCTTCGTATGCCGTCT 1490 0.2608182691819584 No Hit GAACTGTCTCTTATACACATCTGACGCTGGTGGCTTCGTATGCCGTCTTCT 1289 0.22563405971513045 No Hit GAATGAAACCTGTCTCTTATACACATCTGACGCTGGTGGCTTCGTATGCCG 1022 0.17889682624426945 No Hit GAATGATCTGTCTCTTATACACATCTGACGCTGGTGGCTTCGTATGCCGTC 993 0.17382049751522463 No Hit GAATGATACGGCGACTGTCTCTTATACACATCTGACGCTGGTGGCTTCGTA 968 0.16944435205915148 No Hit GAATGAAACGGCTGTCTCTTATACACATCTGACGCTGGTGGCTTCGTATGC 943 0.16506820660307836 No Hit GATACTGAAGCTACGAATATACTGACTATGAAGACCTATGCTTTGATTCAT 868 0.15193977023485897 No Hit GAATGCTGTCTCTTATACACATCTGACGCTGGTGGCTTCGTATGCCGTCTT 683 0.11955629385991783 No Hit GAATCTATCTCTTATACACATCTGACGCTGGTGGCTTCGTATGCCGTCTTC 612 0.10712804076467015 No Hit >>END_MODULE >>Adapter Content fail #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.07702016002688704 0.0 2 0.0 0.0 0.0 0.6886302489676673 0.0 3 0.0 0.0 0.0 0.8102870926465002 0.0 4 0.0 0.0 0.0 1.1952128469626926 0.0 5 0.0 0.0 0.0 2.743318063503122 0.0 6 0.0 0.0 0.0 3.12141703090784 0.0 7 0.0 0.0 0.0 3.645854302363644 0.0 8 0.0 0.0 0.0 4.264291178215898 0.0 9 0.0 0.0 0.0 4.446688920825026 0.0 10 0.0 0.0 0.0 6.620057800129183 0.0 11 0.0 0.0 0.0 7.262475953080719 0.0 12 0.0 0.0 0.0 9.485557844765868 0.0 13 0.0 0.0 0.0 9.799414996875432 0.0 14 0.0 0.0 0.0 9.956606141657579 0.0 15 0.0 0.0 0.0 10.346783270521058 0.0 16 0.0 0.0 0.0 10.774945341943253 0.0 17 0.0 0.0 0.0 11.19242961845263 0.0 18 0.0 0.0 0.0 11.663302869526099 0.0 19 0.0 0.0 0.0 12.049278898751748 0.0 20 0.0 0.0 0.0 12.365761738134957 0.0 21 0.0 0.0 0.0 12.719179245167423 0.0 22 0.0 0.0 0.0 13.102704632937671 0.0 23 0.0 0.0 0.0 13.453146361060007 0.0 24 0.0 0.0 0.0 13.743897465161506 0.0 25 0.0 0.0 0.0 14.003665459434007 0.0 26 0.0 0.0 0.0 14.245053642791001 0.0 27 0.0 0.0 0.0 14.513748973793891 0.0 28 1.7504581824292508E-4 0.0 0.0 14.773867059702877 0.0 29 1.7504581824292508E-4 0.0 0.0 15.034510283066593 0.0 30 1.7504581824292508E-4 0.0 0.0 15.345216610447785 0.0 31 5.251374547287752E-4 0.0 0.0 15.643669730551972 0.0 32 5.251374547287752E-4 0.0 0.0 15.913765428100806 0.0 33 5.251374547287752E-4 0.0 0.0 16.187887179469225 0.0 34 5.251374547287752E-4 0.0 0.0 16.475487458842352 0.0 35 5.251374547287752E-4 0.0 0.0 16.787244061133002 0.0 36 5.251374547287752E-4 0.0 0.0 17.08499699796422 0.0 37 5.251374547287752E-4 0.0 0.0 17.390802042434608 0.0 38 5.251374547287752E-4 0.0 0.0 17.703608919634714 0.0 39 5.251374547287752E-4 0.0 0.0 18.05230018957462 0.0 >>END_MODULE >>Kmer Content warn #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position ATCCGTT 20 7.0303027E-4 45.000004 19 GTATACG 20 7.0303027E-4 45.000004 1 TCGAGTG 20 7.0303027E-4 45.000004 1 CACGTCA 40 6.8048394E-9 45.000004 34 GCGCTTA 20 7.0303027E-4 45.000004 24 CACCGAA 20 7.0303027E-4 45.000004 16 GCATCCG 20 7.0303027E-4 45.000004 16 CCTCGAC 25 3.8883336E-5 45.0 30 CGGGCCA 25 3.8883336E-5 45.0 6 GCCTAAC 25 3.8883336E-5 45.0 16 CTCGACT 25 3.8883336E-5 45.0 31 TATAGCG 25 3.8883336E-5 45.0 1 CGCACGG 25 3.8883336E-5 45.0 2 TCGACTA 25 3.8883336E-5 45.0 32 TACGAAT 130 0.0 43.269234 12 CGTTTTA 130 0.0 43.269234 1 TACGGCT 1095 0.0 40.68493 7 TGATAGT 50 1.0786607E-9 40.5 32 ATCTACC 50 1.0786607E-9 40.5 15 CGTTTTT 1880 0.0 40.332447 1 >>END_MODULE