##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR2936604.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 477241 Sequences flagged as poor quality 0 Sequence length 51 %GC 48 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 31.120239040652418 31.0 31.0 33.0 28.0 34.0 2 31.153440295364398 31.0 31.0 34.0 28.0 34.0 3 30.931248572524154 31.0 31.0 34.0 28.0 34.0 4 34.92973571005006 35.0 35.0 37.0 32.0 37.0 5 35.13256824120308 35.0 35.0 37.0 33.0 37.0 6 35.08332896796377 35.0 35.0 37.0 32.0 37.0 7 30.822173702594707 35.0 35.0 37.0 0.0 37.0 8 32.81810238432993 35.0 33.0 37.0 17.0 37.0 9 35.91273172254689 38.0 34.0 39.0 32.0 39.0 10 36.02270970013054 37.0 35.0 39.0 32.0 39.0 11 36.27935361798337 37.0 35.0 39.0 32.0 39.0 12 36.33985973543765 38.0 35.0 39.0 32.0 39.0 13 36.12559272987861 38.0 35.0 39.0 31.0 39.0 14 37.27839393513969 39.0 36.0 40.0 32.0 41.0 15 37.3509400910651 39.0 36.0 41.0 32.0 41.0 16 37.475485132249744 39.0 36.0 40.0 32.0 41.0 17 37.21248174402451 39.0 36.0 40.0 32.0 41.0 18 37.1427161538929 39.0 36.0 40.0 32.0 41.0 19 36.94011201887516 39.0 35.0 40.0 31.0 41.0 20 36.86614729245811 39.0 35.0 40.0 31.0 41.0 21 37.04711875132271 39.0 35.0 40.0 32.0 41.0 22 37.077505914202675 39.0 35.0 40.0 32.0 41.0 23 37.15484210283693 39.0 35.0 40.0 32.0 41.0 24 37.008280931437156 39.0 35.0 40.0 31.0 41.0 25 36.828872624103965 39.0 35.0 40.0 31.0 41.0 26 36.684651989246525 38.0 35.0 40.0 31.0 41.0 27 36.69880207274731 39.0 35.0 40.0 31.0 41.0 28 36.65967090002745 39.0 35.0 40.0 31.0 41.0 29 36.57094214453494 39.0 35.0 40.0 31.0 41.0 30 36.42054643251523 38.0 35.0 40.0 30.0 41.0 31 36.44275114669527 38.0 35.0 40.0 30.0 41.0 32 36.23185769873083 38.0 35.0 40.0 30.0 41.0 33 36.00453858742229 38.0 35.0 40.0 30.0 41.0 34 35.96890879031768 38.0 35.0 40.0 29.0 41.0 35 35.645912652098204 38.0 35.0 40.0 27.0 41.0 36 35.71706538206064 38.0 35.0 40.0 28.0 41.0 37 35.587026261364805 38.0 35.0 40.0 27.0 41.0 38 35.478064541814305 38.0 34.0 40.0 27.0 41.0 39 35.48941310574741 38.0 34.0 40.0 27.0 41.0 40 35.13885227798953 38.0 34.0 40.0 26.0 41.0 41 34.99955158923898 38.0 34.0 40.0 25.0 41.0 42 34.93959026990556 38.0 34.0 40.0 25.0 41.0 43 34.94009735123345 38.0 34.0 40.0 25.0 41.0 44 34.858298008762866 38.0 34.0 40.0 25.0 41.0 45 34.70771371277824 37.0 34.0 40.0 24.0 41.0 46 34.51837541200358 37.0 33.0 40.0 24.0 41.0 47 34.28126250678378 37.0 33.0 40.0 23.0 41.0 48 34.24431262192477 36.0 33.0 40.0 24.0 41.0 49 34.1081969068039 36.0 33.0 40.0 24.0 41.0 50 33.93163202658615 36.0 33.0 40.0 23.0 41.0 51 32.04240624757722 35.0 30.0 38.0 18.0 40.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 7 1.0 8 21.0 9 44.0 10 27.0 11 32.0 12 24.0 13 20.0 14 22.0 15 43.0 16 61.0 17 149.0 18 327.0 19 558.0 20 1009.0 21 1462.0 22 2037.0 23 2802.0 24 3931.0 25 5316.0 26 6576.0 27 7819.0 28 8869.0 29 10087.0 30 12333.0 31 15343.0 32 20102.0 33 26820.0 34 39827.0 35 43440.0 36 48403.0 37 67912.0 38 86309.0 39 65510.0 40 5.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 47.42656226099602 18.7037576402698 21.091859249310097 12.777820849424085 2 30.74379611139864 31.358160761543957 21.456664452551227 16.441378674506172 3 30.248239359149782 30.29873795419924 25.43348119713101 14.019541489519971 4 26.895845076177444 23.156225051912973 32.44251855980521 17.505411312104364 5 31.11090622976651 26.64062811032581 23.29137689343539 18.957088766472285 6 24.24959297294239 38.55976330617026 24.324607483430803 12.866036237456546 7 62.25345265809099 18.11830919807812 15.924029997422688 3.704208146408209 8 70.81495512749323 12.625486913320524 11.688224607692968 4.871333351493271 9 65.3051602858933 7.888048176916904 12.93602184221389 13.870769694975913 10 41.42121066714721 23.469693509149465 20.382993078968486 14.72610274473484 11 33.69450654910203 24.655467572987234 24.337389285497267 17.312636592413476 12 30.568203486288898 20.51961168466247 28.43950959787613 20.47267523117251 13 24.138328433642542 23.49127589624529 33.069245936539396 19.301149733572764 14 19.979842469527973 29.27305072280043 27.544364377746255 23.20274242992534 15 18.090231141079663 23.806211117653344 38.310203859266075 19.793353882000915 16 20.064286178262137 25.016082021452473 31.180891834523855 23.738739965761532 17 19.681670267223478 24.10878361247252 32.3901341251066 23.819411995197395 18 20.89636053901488 26.01411027133042 29.81135317376336 23.27817601589134 19 23.6834220027198 27.156719560976526 26.4713216173799 22.688536818923772 20 26.632875213990413 24.47107436284812 31.01933823791334 17.876712185248124 21 24.16514926420823 29.0817427672811 27.190245599183644 19.56286236932703 22 21.5972642752823 23.982432355979473 28.778541659245537 25.641761709492688 23 22.897236406763042 29.12302170182361 28.526048683998233 19.45369320741512 24 23.75655067355906 23.157691816084537 28.193093217053857 24.892664293302545 25 21.491447717191104 29.867299750021477 26.39316404080957 22.248088491977846 26 21.636657370175655 26.60060640221607 28.70331761101833 23.05941861658994 27 23.93423867605675 28.43636653179421 25.509543396313394 22.119851395835646 28 20.23757388824514 26.8711196229997 31.553659471839175 21.33764701691598 29 27.03979750272923 24.464578692945494 26.7692842819456 21.72633952237968 30 21.919952393025746 28.900702160962698 28.36910491764119 20.810240528370365 31 28.97529759597352 24.510886533219065 24.08028647999648 22.433529390810932 32 28.601063194486642 27.661915049209938 25.139709287341194 18.597312468962222 33 23.990394790053664 26.03296866782192 23.787981334378227 26.18865520774619 34 29.933723213219317 24.625294138600832 25.807506060879092 19.633476587300756 35 22.24347866172437 26.711032790560747 27.042731031072353 24.002757516642532 36 26.987203530291826 29.598043755670616 23.508667528565233 19.90608518547233 37 26.090382008251595 28.781265649849868 26.92853296342938 18.199819378469158 38 23.97467945964408 26.585729222761668 24.216695547951662 25.22289576964259 39 29.996794072596444 23.66309684205674 25.083134097866694 21.25697498748012 40 23.667497134571423 23.554975368838804 30.53342022164902 22.244107274940752 41 22.523840156231337 29.219199523930257 25.919189675656533 22.33777064418187 42 22.47920861786812 24.95510653946329 31.322120270471316 21.243564572197275 43 24.744102036497285 27.274479770179006 24.460387938169603 23.521030255154106 44 24.11276482950962 25.438091027384484 27.3126156386396 23.1365285044663 45 22.884664142435373 23.470741197843438 26.54885058073384 27.095744078987344 46 25.135937608042898 27.978945648005933 24.54692702429171 22.33818971965946 47 21.215696052937613 24.825821754627118 32.79160843263676 21.166873759798506 48 24.396898003314888 25.322426195569953 26.294890841314977 23.985784959800185 49 21.17797925995461 23.941153421436965 31.159099909689235 23.721767408919185 50 21.934620034741357 24.023920828260774 28.888968047590215 25.152491089407658 51 22.03184554554198 23.545546170593052 26.03778803581419 28.384820248050772 >>END_MODULE >>Per sequence GC content warn #GC Content Count 0 157.0 1 495.5 2 834.0 3 3375.5 4 5917.0 5 4063.5 6 2210.0 7 2015.5 8 1821.0 9 1738.0 10 1655.0 11 1611.5 12 1568.0 13 1502.0 14 1436.0 15 1481.5 16 1527.0 17 1492.0 18 1457.0 19 1522.5 20 1588.0 21 1939.5 22 2291.0 23 2203.0 24 2115.0 25 2348.0 26 3224.0 27 3867.0 28 4651.5 29 5436.0 30 6872.5 31 8309.0 32 9499.5 33 10690.0 34 11040.0 35 11390.0 36 12374.0 37 13358.0 38 14146.5 39 14935.0 40 16894.0 41 18853.0 42 20702.5 43 22552.0 44 24890.0 45 27228.0 46 27681.0 47 28134.0 48 47043.0 49 65952.0 50 50750.5 51 35549.0 52 34900.5 53 34252.0 54 30331.5 55 26411.0 56 25148.5 57 23886.0 58 23635.5 59 23385.0 60 23019.0 61 22653.0 62 20354.0 63 18055.0 64 14833.0 65 11611.0 66 9463.0 67 7315.0 68 6535.5 69 5756.0 70 4778.0 71 3800.0 72 3392.5 73 2985.0 74 2367.0 75 1349.0 76 949.0 77 743.0 78 537.0 79 384.5 80 232.0 81 165.0 82 98.0 83 85.5 84 73.0 85 59.5 86 46.0 87 34.5 88 23.0 89 14.5 90 6.0 91 5.0 92 4.0 93 3.5 94 3.0 95 2.0 96 1.0 97 1.0 98 1.0 99 0.5 100 0.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 44 0.0 45 0.0 46 0.0 47 0.0 48 0.0 49 0.0 50 0.0 51 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 51 477241.0 >>END_MODULE >>Sequence Duplication Levels fail #Total Deduplicated Percentage 30.26985880806963 #Duplication Level Percentage of deduplicated Percentage of total 1 74.47198050943452 22.54256335177896 2 8.657837039036764 5.241430095098369 3 3.5015908001325244 3.1797797737094124 4 2.093567946309544 2.534880245595607 5 1.4266406348199843 2.1592105292927877 6 1.0453925664778534 1.8986331231774098 7 0.8218620651000987 1.7414354069201963 8 0.6299019345385476 1.52536340971294 9 0.5320163744577489 1.4493654484575444 >10 6.59619912330065 43.272648257339256 >50 0.16760454517643933 3.243599896056102 >100 0.04571033050266527 2.490561450694577 >500 0.0027703230607675922 0.6178185686192692 >1k 0.004848065356343286 2.543810828512458 >5k 0.0013851615303837961 3.4553395480090927 >10k+ 6.925807651918981E-4 2.1035600670260424 >>END_MODULE >>Overrepresented sequences fail #Sequence Count Percentage Possible Source GAATGATACCTGTCTCTTATACACATCTGACGCGAGGCGTATCGTATGCCG 10034 2.102501671063467 No Hit GAATGATACGGCTGTCTCTTATACACATCTGACGCGAGGCGTATCGTATGC 9335 1.9560347916461496 No Hit GAATCTGTCTCTTATACACATCTGACGCGAGGCGTATCGTATGCCGTCTTC 7147 1.4975662191639025 No Hit CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 3258 0.6826739529923037 No Hit GCTGTCTCTTATACACATCTGACGCGAGGCGTATCGTATGCCGTCTTCTGC 2259 0.4733457519366525 TruSeq Adapter, Index 14 (95% over 22bp) GAATGACTGTCTCTTATACACATCTGACGCGAGGCGTATCGTATGCCGTCT 1850 0.3876448167697243 No Hit GAATGATCTGTCTCTTATACACATCTGACGCGAGGCGTATCGTATGCCGTC 1284 0.2690464566120681 No Hit GAATGATACGGCGACTGTCTCTTATACACATCTGACGCGAGGCGTATCGTA 1237 0.2591981828887292 No Hit GAACTGTCTCTTATACACATCTGACGCGAGGCGTATCGTATGCCGTCTTCT 1220 0.25563604132922363 No Hit GAATGAAACCTGTCTCTTATACACATCTGACGCGAGGCGTATCGTATGCCG 1026 0.21498572000310115 No Hit GAATGAAACGGCTGTCTCTTATACACATCTGACGCGAGGCGTATCGTATGC 983 0.20597559723494002 No Hit GAATCTATCTCTTATACACATCTGACGCGAGGCGTATCGTATGCCGTCTTC 772 0.16176313434931197 No Hit CCTGTCTCTTATACACATCTGACGCGAGGCGTATCGTATGCCGTCTTCTGC 623 0.13054201126893958 TruSeq Adapter, Index 14 (95% over 22bp) GATACTGAAGCTACGAATATACTGACTATGAAGACCTATGCTTTGATTCAT 569 0.11922697337403954 No Hit >>END_MODULE >>Adapter Content fail #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.0873772370772838 0.0 2 0.0 0.0 0.0 0.8888590879660381 0.0 3 0.0 0.0 0.0 1.0659184772473447 0.0 4 0.0 0.0 0.0 1.5434549839598861 0.0 5 0.0 0.0 0.0 3.7285145241083644 0.0 6 0.0 0.0 0.0 4.132503284504056 0.0 7 0.0 0.0 0.0 4.8627423042026985 0.0 8 0.0 0.0 0.0 5.70131233485807 0.0 9 0.0 0.0 0.0 5.903935328272299 0.0 10 0.0 0.0 0.0 8.846054718685108 0.0 11 0.0 0.0 0.0 9.533128964192096 0.0 12 0.0 0.0 0.0 12.442350929614179 0.0 13 0.0 0.0 0.0 12.805270293206158 0.0 14 0.0 0.0 0.0 13.005797909232442 0.0 15 0.0 0.0 0.0 13.52272751083834 0.0 16 0.0 0.0 0.0 14.014512583788903 0.0 17 0.0 0.0 0.0 14.476543297830656 0.0 18 0.0 0.0 0.0 14.988863069183076 0.0 19 0.0 0.0 0.0 15.373155282132089 0.0 20 0.0 0.0 0.0 15.713654107673062 0.0 21 0.0 0.0 0.0 16.09585094323413 0.0 22 0.0 0.0 0.0 16.515135958561817 0.0 23 0.0 0.0 0.0 16.893561114824585 0.0 24 0.0 0.0 0.0 17.215411081612853 0.0 25 0.0 0.0 0.0 17.498077491246562 0.0 26 0.0 0.0 0.0 17.762304579866356 0.0 27 0.0 0.0 0.0 18.064877074685537 0.0 28 0.0 0.0 0.0 18.345657644670094 0.0 29 0.0 0.0 0.0 18.62769544108742 0.0 30 0.0 0.0 0.0 18.976994851657757 0.0 31 0.0 0.0 0.0 19.278519657782965 0.0 32 0.0 0.0 0.0 19.576482322348667 0.0 33 0.0 0.0 0.0 19.851186297908185 0.0 34 0.0 0.0 0.0 20.13531947171345 0.0 35 0.0 0.0 0.0 20.458007589456898 0.0 36 0.0 0.0 0.0 20.782162471371908 0.0 37 0.0 0.0 0.0 21.099821683384285 0.0 38 0.0 0.0 0.0 21.434034376761428 0.0 39 0.0 0.0 0.0 21.748969598169477 0.0 >>END_MODULE >>Kmer Content fail #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position TCGCAAT 30 2.1628239E-6 45.000004 30 TCGTTCA 20 7.0291356E-4 45.0 16 GGGTCGA 25 3.887366E-5 45.0 7 CGACCCT 25 3.887366E-5 45.0 12 TAACGCC 25 3.887366E-5 45.0 12 CGTTCAT 20 7.0291356E-4 45.0 17 GCCGATT 35 1.2099372E-7 45.0 9 ATATCGT 20 7.0291356E-4 45.0 30 CCGTACT 25 3.887366E-5 45.0 33 AGTTGCG 25 3.887366E-5 45.0 1 TGACACG 20 7.0291356E-4 45.0 12 TTGCGTG 20 7.0291356E-4 45.0 1 ACGTCCG 20 7.0291356E-4 45.0 1 CGCAATT 25 3.887366E-5 45.0 31 GTAAGCG 20 7.0291356E-4 45.0 1 GGCGAAT 25 3.887366E-5 45.0 8 CGATCCT 20 7.0291356E-4 45.0 10 TAAGACG 20 7.0291356E-4 45.0 1 TAATGAC 35 1.2099372E-7 45.0 9 ACGAATT 20 7.0291356E-4 45.0 8 >>END_MODULE