SRR2936603.fastq FastQC Report

Basic Statistics

Measure	Value
Filename	SRR2936603.fastq
File type	Conventional base calls
Encoding	Sanger / Illumina 1.9
Total Sequences	384673
Sequences flagged as poor quality	0
Sequence length	51
%GC	46

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
GAATGATACCTGTCTCTTATACACATCTGACGCGCGTCTAATCGTATGCCG	2817	0.7323102999170724	No Hit
CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	2596	0.6748589061358609	No Hit
GAATGATACGGCTGTCTCTTATACACATCTGACGCGCGTCTAATCGTATGC	2562	0.6660202301695206	No Hit
GAATCTGTCTCTTATACACATCTGACGCGCGTCTAATCGTATGCCGTCTTC	2258	0.5869920685881256	No Hit
GCTGTCTCTTATACACATCTGACGCGCGTCTAATCGTATGCCGTCTTCTGC	1094	0.284397397269889	No Hit
GATACTGAAGCTACGAATATACTGACTATGAAGACCTATGCTTTGATTCAT	820	0.21316806742349997	No Hit
GAATGCTGTCTCTTATACACATCTGACGCGCGTCTAATCGTATGCCGTCTT	706	0.18353250683047678	No Hit
AAGGAAGGAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAG	569	0.1479178419072823	No Hit
GAATGACTGTCTCTTATACACATCTGACGCGCGTCTAATCGTATGCCGTCT	505	0.13128033420593596	No Hit
CAAGGAAGGTGAAATAATCTATATCTTTTATTTTGTTTTGGTTTAATATAA	447	0.11620259285159083	No Hit
GTGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAG	420	0.10918364429008534	No Hit
CCTGTCTCTTATACACATCTGACGCGCGTCTAATCGTATGCCGTCTTCTGC	414	0.10762387794308412	No Hit
GAACTGTCTCTTATACACATCTGACGCGCGTCTAATCGTATGCCGTCTTCT	391	0.10164477361291278	No Hit
CTGTCTCTTATACACATCTGACGCGCGTCTAATCGTATGCCGTCTTCTGCT	389	0.10112485149724572	No Hit

Adapter graph

Kmer graph

Sequence	Count	PValue	Obs/Exp Max	Max Obs/Exp Position
CTATCGC	20	7.027427E-4	45.000004	24
GCACGTC	20	7.027427E-4	45.000004	23
CACGATA	20	7.027427E-4	45.000004	27
CGACAGG	30	2.1617216E-6	45.000004	2
TACGCGC	20	7.027427E-4	45.000004	34
CCATCGA	20	7.027427E-4	45.000004	31
GTCGTTT	20	7.027427E-4	45.000004	33
GACGGTA	20	7.027427E-4	45.000004	32
CACACGC	20	7.027427E-4	45.000004	26
CCTATCG	20	7.027427E-4	45.000004	23
ATGTTCG	20	7.027427E-4	45.000004	40
GGTTAAC	20	7.027427E-4	45.000004	8
TAGTCGG	20	7.027427E-4	45.000004	2
ACGGTAT	20	7.027427E-4	45.000004	33
ACGAAAG	20	7.027427E-4	45.000004	1
GCGAGAC	35	1.2091186E-7	45.0	21
CGGTTTA	25	3.8859493E-5	45.0	1
GCGCAAA	25	3.8859493E-5	45.0	40
GTAATCG	35	1.2091186E-7	45.0	40
GTTCACG	25	3.8859493E-5	45.0	1