##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR2936601.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 816628 Sequences flagged as poor quality 0 Sequence length 51 %GC 47 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 31.209281337402096 31.0 31.0 33.0 30.0 34.0 2 31.236967138035922 31.0 31.0 34.0 28.0 34.0 3 31.030158162590556 31.0 31.0 34.0 28.0 34.0 4 35.006976248671364 35.0 35.0 37.0 32.0 37.0 5 35.22028512370382 35.0 35.0 37.0 33.0 37.0 6 35.17953217376823 36.0 35.0 37.0 32.0 37.0 7 30.999114651959033 35.0 35.0 37.0 0.0 37.0 8 33.00656724971468 35.0 35.0 37.0 17.0 37.0 9 36.20938175031961 39.0 35.0 39.0 32.0 39.0 10 36.1194472881165 37.0 35.0 39.0 32.0 39.0 11 36.405013053679276 38.0 35.0 39.0 32.0 39.0 12 36.51425985883413 38.0 35.0 39.0 32.0 39.0 13 36.45768330255637 39.0 35.0 39.0 32.0 39.0 14 37.58692574832114 39.0 36.0 41.0 33.0 41.0 15 37.704585196686864 39.0 36.0 41.0 33.0 41.0 16 37.67139750290218 39.0 36.0 41.0 33.0 41.0 17 37.50853754708386 39.0 36.0 41.0 32.0 41.0 18 37.42472459920551 39.0 36.0 40.0 32.0 41.0 19 37.24891505067178 39.0 36.0 40.0 32.0 41.0 20 37.234291501148626 39.0 35.0 40.0 32.0 41.0 21 37.3117049623574 39.0 35.0 40.0 32.0 41.0 22 37.39571996061854 39.0 36.0 40.0 32.0 41.0 23 37.45051724897995 39.0 36.0 41.0 33.0 41.0 24 37.35199748232978 39.0 35.0 41.0 32.0 41.0 25 37.07241485719324 39.0 35.0 40.0 32.0 41.0 26 37.01221608859848 39.0 35.0 40.0 31.0 41.0 27 37.061701288714076 39.0 35.0 40.0 32.0 41.0 28 37.04757613013514 39.0 35.0 40.0 32.0 41.0 29 37.02245453254113 39.0 35.0 40.0 31.0 41.0 30 36.83346027811929 39.0 35.0 40.0 31.0 41.0 31 36.84414935564296 39.0 35.0 40.0 31.0 41.0 32 36.716263708812335 39.0 35.0 40.0 31.0 41.0 33 36.59632537703826 39.0 35.0 40.0 30.0 41.0 34 36.51844168948407 39.0 35.0 40.0 30.0 41.0 35 36.44197725280054 39.0 35.0 40.0 30.0 41.0 36 36.42403762790401 39.0 35.0 40.0 30.0 41.0 37 36.361457113887845 39.0 35.0 40.0 30.0 41.0 38 36.25179273794188 39.0 35.0 40.0 30.0 41.0 39 36.20393618636638 39.0 35.0 40.0 30.0 41.0 40 36.03856590761032 38.0 35.0 40.0 29.0 41.0 41 35.87584432569052 38.0 35.0 40.0 29.0 41.0 42 35.892940237170414 38.0 35.0 40.0 29.0 41.0 43 35.86383396111816 38.0 35.0 40.0 29.0 41.0 44 35.70555136488095 38.0 35.0 40.0 28.0 41.0 45 35.63344754282244 38.0 35.0 40.0 28.0 41.0 46 35.52125325117434 38.0 34.0 40.0 28.0 41.0 47 35.447208520893234 38.0 34.0 40.0 27.0 41.0 48 35.37232007719549 38.0 34.0 40.0 27.0 41.0 49 35.26253324647208 38.0 34.0 40.0 27.0 41.0 50 35.09598495275695 38.0 34.0 40.0 26.0 41.0 51 33.413167317309714 36.0 32.0 39.0 22.0 40.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 7 5.0 8 31.0 9 64.0 10 76.0 11 66.0 12 41.0 13 32.0 14 43.0 15 70.0 16 98.0 17 226.0 18 423.0 19 732.0 20 1256.0 21 1826.0 22 2654.0 23 3687.0 24 4957.0 25 6676.0 26 8773.0 27 10107.0 28 11853.0 29 13958.0 30 17268.0 31 22274.0 32 29161.0 33 40953.0 34 62446.0 35 69878.0 36 82695.0 37 122730.0 38 164823.0 39 136740.0 40 6.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 45.2187532144379 19.999804072356078 22.43836851050907 12.343074202696943 2 32.65452568366502 26.952908790783564 23.63536396008954 16.757201565461873 3 32.56623578912308 26.36586058768497 25.662725255563117 15.405178367628835 4 29.352532609707232 24.10191666217666 28.07790083122303 18.467649896893075 5 27.24263679423189 28.755810479190036 24.281435365919364 19.72011736065871 6 25.79999706108534 36.18012118124776 24.35184686295351 13.668034894713383 7 66.05933178877041 18.313969151192463 11.58165039650857 4.045048663528559 8 76.46811032685629 8.853847774017055 9.971859892141833 4.706182006984821 9 69.74117958238023 8.765802789030012 11.877990957939232 9.61502667065053 10 40.659516940393914 24.695822332812494 19.154988562723783 15.489672164069809 11 31.16853695930093 25.454797043451855 25.146211004276118 18.230454992971097 12 28.769525414264514 22.044064127117853 28.838589908746698 20.34782054987093 13 24.351969317730962 23.363881718481363 31.46463261117669 20.819516352610982 14 20.421293416341346 27.739680735904233 29.117052072669562 22.721973775084862 15 19.93429076641996 25.779792022805974 34.96659433671145 19.319322874062607 16 22.53657724202452 24.98579524581572 30.56838609501511 21.90924141714465 17 22.148885416615645 24.865054835249342 30.196735845452277 22.78932390268274 18 22.11814926747552 26.587503734870708 29.668221025975107 21.626125971678658 19 24.46548489642775 27.410889658449133 26.615056059797116 21.508569385326 20 26.07221403135822 25.79632341776182 28.774056241030188 19.35740630984977 21 25.264992138403287 27.60179665649476 27.630451074418218 19.50276013068374 22 23.447028512370384 24.058077851849312 28.233908217695202 24.260985418085102 23 23.588341325548477 27.061526178382323 28.287298500663706 21.062833995405498 24 24.005054933213167 24.375235725446593 28.433631959717275 23.186077381622965 25 22.957454312122533 27.684331176496517 26.673099624308744 22.685114887072206 26 21.583879073458174 27.045851966868632 28.39346679271345 22.976802166959743 27 22.90173738838247 27.81621497181091 27.262719377733802 22.019328262072815 28 20.724124080976893 27.561998853823283 30.498586871868223 21.2152901933316 29 22.757730570100463 26.03670214589752 28.980392541034593 22.225174742967422 30 22.761771577756335 27.256964003193623 29.006965227741393 20.97429919130865 31 23.800555454870516 26.707386961994935 27.23920806046327 22.252849522671276 32 24.397155130610265 29.119990987328382 26.663915515999943 19.818938366061413 33 24.49940486978159 26.941887860813 25.61043706559168 22.94827020381373 34 24.300783220756575 26.822249543243682 28.5184931204906 20.358474115509143 35 22.277095568606516 27.85184931204906 26.91862145309737 22.952433666247053 36 22.37959021733274 28.02426563869963 27.653472572578945 21.942671571388686 37 22.298157790328034 30.189755923137586 27.334967696429707 20.177118590104676 38 23.219997354976808 27.73784391424247 26.305245472846877 22.736913257933843 39 25.09490245252428 26.313694852490976 26.302918832075317 22.288483862909427 40 24.49952732455904 25.342628467307023 29.436659041815854 20.72118516631808 41 21.49081344259565 27.177368397850678 28.02793928202315 23.30387887753053 42 21.48897662093389 27.699882933232757 28.694215726132338 22.116924719701014 43 23.199914771474894 26.483049809705278 26.737021018138 23.58001440068183 44 22.57429331347933 25.884368402748866 28.04422576742409 23.497112516347713 45 21.99128611803661 25.871020832006742 27.060424085385264 25.077268964571388 46 23.46111081177721 27.55048810474292 26.735918925140943 22.25248215833893 47 22.013327977977735 25.636397478411222 30.776191852348926 21.574082691262117 48 22.010389063318918 25.784690213904003 28.231214212591286 23.97370651018579 49 20.959727072792017 25.578231459122147 29.8624343030119 23.599607165073937 50 20.998300327688984 25.286789088789508 29.248813413206502 24.466097170315003 51 20.928256194987192 24.936813334835445 28.11953545555626 26.015395014621102 >>END_MODULE >>Per sequence GC content fail #GC Content Count 0 312.0 1 896.0 2 1480.0 3 4712.5 4 7945.0 5 5358.0 6 2771.0 7 2574.5 8 2378.0 9 2324.5 10 2271.0 11 2175.5 12 2080.0 13 2073.0 14 2066.0 15 1989.0 16 1912.0 17 2010.0 18 2108.0 19 2187.5 20 2267.0 21 2771.5 22 3276.0 23 3851.5 24 4427.0 25 4910.0 26 6314.0 27 7235.0 28 9240.0 29 11245.0 30 13216.0 31 15187.0 32 17517.0 33 19847.0 34 22154.0 35 24461.0 36 25704.5 37 26948.0 38 29440.0 39 31932.0 40 36322.0 41 40712.0 42 44604.0 43 48496.0 44 67368.0 45 86240.0 46 74016.5 47 61793.0 48 61736.0 49 61679.0 50 55140.0 51 48601.0 52 45107.5 53 41614.0 54 39860.0 55 38106.0 56 38370.0 57 38634.0 58 38334.0 59 38034.0 60 38237.0 61 38440.0 62 34973.0 63 31506.0 64 26963.5 65 22421.0 66 18750.0 67 15079.0 68 12193.5 69 9308.0 70 7913.5 71 6519.0 72 5588.0 73 4657.0 74 4012.0 75 2503.0 76 1639.0 77 1396.5 78 1154.0 79 846.0 80 538.0 81 407.5 82 277.0 83 191.0 84 105.0 85 88.5 86 72.0 87 60.5 88 49.0 89 34.0 90 19.0 91 15.0 92 11.0 93 11.0 94 11.0 95 8.0 96 5.0 97 3.0 98 1.0 99 0.5 100 0.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 44 0.0 45 0.0 46 0.0 47 0.0 48 0.0 49 0.0 50 0.0 51 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 51 816628.0 >>END_MODULE >>Sequence Duplication Levels fail #Total Deduplicated Percentage 29.89029161863771 #Duplication Level Percentage of deduplicated Percentage of total 1 72.93072053254258 21.799205046750668 2 8.888001852981091 5.313299345851942 3 3.840429651380042 3.443746866618379 4 2.3223802003622507 2.7766648575271176 5 1.5656811189216813 2.339933261318202 6 1.1362952008545502 2.037851695104061 7 0.8763164524255714 1.8335348019247273 8 0.6770631590708649 1.6190092215091396 9 0.5431194239767211 1.4610598169769653 >10 6.963133012248782 46.54796786276944 >50 0.21134000913154571 3.906709021295842 >100 0.038203770480395555 2.062262251687741 >500 0.0032513847217357913 0.6629220727768617 >1k 0.0028449616315188173 1.6173986580449211 >5k 0.0012192692706509216 2.578435219844033 >10k+ 0.0 0.0 >>END_MODULE >>Overrepresented sequences warn #Sequence Count Percentage Possible Source GAATGATACCTGTCTCTTATACACATCTGACGCTATAGGACTCGTATGCCG 7385 0.9043285314733269 No Hit GAATGATACGGCTGTCTCTTATACACATCTGACGCTATAGGACTCGTATGC 7108 0.8704085581194865 No Hit GAATCTGTCTCTTATACACATCTGACGCTATAGGACTCGTATGCCGTCTTC 6732 0.8243655617980281 No Hit CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 4379 0.5362294704565604 No Hit GCTGTCTCTTATACACATCTGACGCTATAGGACTCGTATGCCGTCTTCTGC 2279 0.2790744378101167 TruSeq Adapter, Index 15 (95% over 21bp) GAACTGTCTCTTATACACATCTGACGCTATAGGACTCGTATGCCGTCTTCT 1579 0.19335609359463551 No Hit GAATGACTGTCTCTTATACACATCTGACGCTATAGGACTCGTATGCCGTCT 1436 0.1758450604191872 No Hit GAATGCTGTCTCTTATACACATCTGACGCTATAGGACTCGTATGCCGTCTT 1270 0.15551756736237307 No Hit GATACTGAAGCTACGAATATACTGACTATGAAGACCTATGCTTTGATTCAT 1219 0.14927237371238802 No Hit GAATGATCTGTCTCTTATACACATCTGACGCTATAGGACTCGTATGCCGTC 1152 0.14106790362319196 No Hit CCTGTCTCTTATACACATCTGACGCTATAGGACTCGTATGCCGTCTTCTGC 821 0.1005353722870144 TruSeq Adapter, Index 15 (95% over 21bp) >>END_MODULE >>Adapter Content fail #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.09233090219781835 0.0 2 0.0 0.0 0.0 0.6063960579358043 0.0 3 0.0 0.0 0.0 0.7613013514109239 0.0 4 0.0 0.0 0.0 1.1537689131403772 0.0 5 0.0 0.0 0.0 2.544242911092933 0.0 6 0.0 0.0 0.0 3.103493879710223 0.0 7 0.0 0.0 0.0 3.6130282086825334 0.0 8 0.0 0.0 0.0 4.342246408401377 0.0 9 0.0 0.0 0.0 4.594870614282145 0.0 10 0.0 0.0 0.0 6.116126314552036 0.0 11 0.0 0.0 0.0 6.7644019063759755 0.0 12 0.0 0.0 0.0 8.28822915697233 0.0 13 0.0 0.0 0.0 8.609060673893131 0.0 14 0.0 0.0 0.0 8.769476432353532 0.0 15 0.0 0.0 0.0 9.080511567078277 0.0 16 0.0 0.0 0.0 9.495510807858658 0.0 17 0.0 0.0 0.0 9.953124311191877 0.0 18 0.0 0.0 0.0 10.459229906395569 0.0 19 0.0 0.0 0.0 10.786061707411452 0.0 20 0.0 0.0 0.0 11.08999446504406 0.0 21 0.0 0.0 0.0 11.447439960422615 0.0 22 0.0 0.0 0.0 11.836968607493253 0.0 23 0.0 0.0 0.0 12.20372066595806 0.0 24 0.0 0.0 0.0 12.528960554867087 0.0 25 0.0 0.0 0.0 12.826280754517358 0.0 26 0.0 0.0 0.0 13.086619611377518 0.0 27 0.0 0.0 0.0 13.350142292451398 0.0 28 0.0 0.0 0.0 13.642931665335992 0.0 29 0.0 0.0 0.0 13.931680030564712 0.0 30 0.0 0.0 0.0 14.27161449276782 0.0 31 0.0 0.0 0.0 14.57775143639454 0.0 32 0.0 0.0 0.0 14.900542229754551 0.0 33 0.0 0.0 0.0 15.215373462580269 0.0 34 0.0 0.0 0.0 15.520653222764834 0.0 35 0.0 0.0 0.0 15.848832026332675 0.0 36 0.0 0.0 0.0 16.176153646458364 0.0 37 0.0 0.0 0.0 16.491964517503686 0.0 38 0.0 0.0 0.0 16.81879631851957 0.0 39 0.0 0.0 0.0 17.150648765410935 0.0 >>END_MODULE >>Kmer Content fail #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position CGTATGG 45 3.8380676E-10 45.0 2 CGTATAG 20 7.032087E-4 45.0 2 TTCGCAC 20 7.032087E-4 45.0 22 CGTCCAT 20 7.032087E-4 45.0 29 GCTACGA 195 0.0 43.846153 10 TACGAAT 205 0.0 41.707317 12 CGAATAT 210 0.0 40.714287 14 TCACGAC 90 0.0 40.0 25 AGGCGAT 130 0.0 39.80769 7 CGTTTTT 1850 0.0 39.77027 1 AACGGCT 80 0.0 39.375 7 TGATACC 975 0.0 39.0 4 ATGGTCG 35 6.246066E-6 38.57143 44 ATAACGC 35 6.246066E-6 38.57143 11 TACGGCT 905 0.0 38.28729 7 ACGGTCT 95 0.0 37.894737 30 GTATCGC 30 1.1396325E-4 37.499996 5 GCGATAT 30 1.1396325E-4 37.499996 9 ACGCTAG 30 1.1396325E-4 37.499996 1 TACGTTC 30 1.1396325E-4 37.499996 37 >>END_MODULE