##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR2936600.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 560773 Sequences flagged as poor quality 0 Sequence length 51 %GC 46 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 30.995252981152802 31.0 30.0 33.0 28.0 34.0 2 31.023235783463186 31.0 31.0 34.0 28.0 34.0 3 30.730327601364547 31.0 30.0 34.0 27.0 34.0 4 34.71091332856611 35.0 35.0 37.0 32.0 37.0 5 34.98202302892614 35.0 35.0 37.0 32.0 37.0 6 34.93566559017642 35.0 35.0 37.0 32.0 37.0 7 30.68760978149804 35.0 35.0 37.0 0.0 37.0 8 32.71651095897984 35.0 33.0 37.0 17.0 37.0 9 35.868970153698555 38.0 34.0 39.0 32.0 39.0 10 35.8788368912198 37.0 35.0 39.0 32.0 39.0 11 36.15398922558683 37.0 35.0 39.0 32.0 39.0 12 36.26350769384403 37.0 35.0 39.0 32.0 39.0 13 36.06549709062312 38.0 35.0 39.0 31.0 39.0 14 37.14097326369137 39.0 36.0 40.0 32.0 41.0 15 37.19326358437371 39.0 36.0 40.0 32.0 41.0 16 37.31116334060306 39.0 36.0 40.0 32.0 41.0 17 37.064958548289596 39.0 35.0 40.0 31.0 41.0 18 36.9367373250852 39.0 35.0 40.0 31.0 41.0 19 36.68486178899484 38.0 35.0 40.0 31.0 41.0 20 36.533766782637535 38.0 35.0 40.0 31.0 41.0 21 36.705346013449294 38.0 35.0 40.0 31.0 41.0 22 36.81539589102899 38.0 35.0 40.0 31.0 41.0 23 36.89653389161033 38.0 35.0 40.0 32.0 41.0 24 36.73946142200142 38.0 35.0 40.0 31.0 41.0 25 36.547183976404 38.0 35.0 40.0 31.0 41.0 26 36.42865829845588 38.0 35.0 40.0 31.0 41.0 27 36.463390712462974 38.0 35.0 40.0 31.0 41.0 28 36.43291313954131 38.0 35.0 40.0 31.0 41.0 29 36.32179866006388 38.0 35.0 40.0 30.0 41.0 30 36.12770051339847 38.0 35.0 40.0 30.0 41.0 31 36.08321014028849 38.0 35.0 40.0 30.0 41.0 32 35.820601205835516 38.0 35.0 40.0 29.0 41.0 33 35.53237406223195 38.0 34.0 40.0 27.0 41.0 34 35.17777246764734 38.0 34.0 40.0 25.0 41.0 35 35.053504715811926 38.0 34.0 40.0 25.0 41.0 36 34.942780768688934 38.0 34.0 40.0 25.0 41.0 37 34.86596537279791 38.0 34.0 40.0 24.0 41.0 38 34.857519887726404 38.0 34.0 40.0 24.0 41.0 39 34.6037951185239 38.0 34.0 40.0 23.0 41.0 40 34.53255417076072 38.0 33.0 40.0 23.0 41.0 41 34.13310020275584 37.0 33.0 40.0 22.0 41.0 42 34.411276933803876 37.0 33.0 40.0 23.0 41.0 43 34.42091184846631 38.0 33.0 40.0 22.0 41.0 44 34.32742303926901 37.0 33.0 40.0 22.0 41.0 45 34.289072405411815 37.0 33.0 40.0 23.0 41.0 46 34.15137319378786 37.0 33.0 40.0 22.0 41.0 47 34.00385895897271 37.0 33.0 40.0 22.0 41.0 48 33.9639426291922 37.0 33.0 40.0 22.0 41.0 49 33.890815000008914 37.0 33.0 40.0 21.0 41.0 50 33.67989721331091 37.0 33.0 40.0 20.0 41.0 51 31.906650284517976 35.0 30.0 39.0 15.0 40.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 7 6.0 8 15.0 9 33.0 10 36.0 11 27.0 12 9.0 13 18.0 14 26.0 15 43.0 16 71.0 17 188.0 18 445.0 19 837.0 20 1447.0 21 2191.0 22 3101.0 23 4153.0 24 5860.0 25 8104.0 26 9834.0 27 10811.0 28 11279.0 29 12626.0 30 14929.0 31 19387.0 32 24532.0 33 32907.0 34 46568.0 35 51956.0 36 57792.0 37 79773.0 38 95474.0 39 66295.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 43.75531632229084 19.414807774268734 21.616411631801103 15.213464271639326 2 30.85526585623773 30.836898352809428 23.001999026343995 15.305836764608852 3 28.021855545826924 30.310125487496727 28.44020664332983 13.227812323346525 4 24.35655782286237 22.090400215416935 37.15924268821787 16.393799273502825 5 28.935059284238008 25.209844268536468 28.022390521654927 17.832705925570597 6 22.546199620880465 36.13333737537292 28.38153762752486 12.938925376221752 7 60.30033542984417 17.39955383015944 18.39657044829191 3.903540291704487 8 69.95968065509574 10.35659705442309 14.396734507545833 5.28698778293534 9 65.04075624183048 6.249409297523241 15.175480987850698 13.534353472795587 10 40.02082839223714 21.772267923027677 23.062451294908993 15.144452389826185 11 30.133940114805814 21.851266020296983 29.075936252280332 18.938857612616868 12 25.57701601182653 18.882685150675943 33.572408086694615 21.96789075080291 13 22.683153432850727 22.59327749374524 38.105614927965505 16.617954145438528 14 20.00363783563046 27.596549762559896 31.630980806850545 20.7688315949591 15 16.45514316844784 23.949084567195637 41.5678001615627 18.02797210279382 16 20.347983943592148 24.599615174054385 31.379185517134385 23.67321536521908 17 20.680917233889648 24.040208783233144 33.19739003126042 22.081483951616786 18 21.3922567598654 24.242429646220483 33.10590916467091 21.259404429243205 19 21.046662374971692 26.884140284928126 29.963996126775005 22.10520121332518 20 22.789791947900486 25.822213266330586 33.743778676933445 17.644216108835483 21 21.284013317331613 28.94772037883422 31.957316061935938 17.810950241898237 22 20.184994641325456 22.103774611117156 33.11839193399111 24.592838813566274 23 20.268094219942828 27.751157776854452 31.93948353433564 20.04126446886708 24 22.074172615300665 23.631665575910397 30.411770894818403 23.882390913970536 25 19.639497622032444 30.46758670620732 28.753880803819015 21.139034867941216 26 19.38199592348419 24.10280095511018 31.195153832299344 25.32004928910629 27 21.287223172299665 27.251847004046198 28.781164571047462 22.67976525260667 28 17.188416703371953 24.55146734953359 33.82990978524287 24.430206161851586 29 21.83789162459676 23.471351152783747 29.157074252861676 25.533682969757816 30 20.487255984150448 27.57194087447149 31.140051322014433 20.800751819363626 31 23.05995474104495 23.466536370331667 27.743668115262327 25.729840773361058 32 27.670198101549108 26.009989781961686 26.261963396953846 20.057848719535357 33 24.715883254008304 23.370597371842084 27.705684831473697 24.20783454267591 34 23.04176556289265 22.616638104901625 31.59941723299802 22.7421790992077 35 23.74401049979225 25.613929343959143 28.244583815554602 22.397476340694006 36 22.08362385492882 24.554677204501644 29.44382129667441 23.917877643895125 37 22.63571890943394 27.09581238754362 30.644485380002244 19.623983323020187 38 23.862418483058207 24.93397506655991 26.55138531990663 24.652221130475255 39 25.13726588120327 22.660149472246346 31.21904941928374 20.983535227266646 40 26.881822056340088 22.955456129307226 30.168713543626385 19.9940082707263 41 19.209733706865347 25.00851503192914 32.72019159267654 23.06155966852898 42 23.486508801243996 23.58547932942563 31.338884004757716 21.589127864572653 43 23.043548815652677 23.09223161600148 29.975943920267202 23.888275648078636 44 21.952376451790652 23.00485223076004 30.56602225856095 24.476749058888355 45 21.540088413671842 22.010688817043615 28.868722281564914 27.58050048771963 46 25.618209150583215 25.640321484807576 27.053192646578918 21.68827671803029 47 18.621438621331627 23.439074277827213 35.98104758966641 21.958439511174753 48 22.23056388235525 24.363155858074478 28.497270731650776 24.909009527919494 49 20.517749606346953 21.600897332788847 34.66215384834862 23.21919921251558 50 21.70557426980258 22.27782008049603 31.555727540377298 24.460878109324096 51 21.037211135343533 22.695457876894928 27.66217346412898 28.605157523632556 >>END_MODULE >>Per sequence GC content fail #GC Content Count 0 162.0 1 459.0 2 756.0 3 5540.0 4 10324.0 5 7016.5 6 3709.0 7 3443.5 8 3178.0 9 3180.0 10 3182.0 11 3056.5 12 2931.0 13 2951.5 14 2972.0 15 2854.5 16 2737.0 17 2617.0 18 2497.0 19 2407.5 20 2318.0 21 2552.0 22 2786.0 23 2849.0 24 2912.0 25 3275.5 26 4365.5 27 5092.0 28 5919.5 29 6747.0 30 7969.5 31 9192.0 32 10059.0 33 10926.0 34 12910.5 35 14895.0 36 15740.0 37 16585.0 38 18146.5 39 19708.0 40 21157.5 41 22607.0 42 24781.0 43 26955.0 44 28932.0 45 30909.0 46 34250.0 47 37591.0 48 61881.0 49 86171.0 50 66215.0 51 46259.0 52 44262.0 53 42265.0 54 36242.5 55 30220.0 56 27566.0 57 24912.0 58 23092.5 59 21273.0 60 19528.5 61 17784.0 62 16002.0 63 14220.0 64 12569.5 65 10919.0 66 9023.0 67 7127.0 68 6059.5 69 4992.0 70 4307.5 71 3623.0 72 3035.0 73 2447.0 74 1953.0 75 1209.0 76 959.0 77 697.5 78 436.0 79 331.5 80 227.0 81 156.5 82 86.0 83 66.0 84 46.0 85 31.0 86 16.0 87 11.0 88 6.0 89 7.0 90 8.0 91 5.5 92 3.0 93 2.0 94 1.0 95 1.5 96 2.0 97 1.5 98 1.0 99 1.0 100 1.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 44 0.0 45 0.0 46 0.0 47 0.0 48 0.0 49 0.0 50 0.0 51 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 51 560773.0 >>END_MODULE >>Sequence Duplication Levels fail #Total Deduplicated Percentage 37.5888147733599 #Duplication Level Percentage of deduplicated Percentage of total 1 78.28337381630868 29.425792382149197 2 8.470278632673175 6.367754692046003 3 3.1308302498988314 3.5305259505083777 4 1.864059687299136 2.802711772494976 5 1.2491640753828483 2.3477298525550636 6 0.8361774984045355 1.8858552663107715 7 0.6766433378075338 1.7803954764732763 8 0.4923096987575284 1.4804270462180273 9 0.4113827956185089 1.3917052534905991 >10 4.444042534093616 34.56695082346729 >50 0.11348431686094396 2.660158546907867 >100 0.021190017671031024 1.6434607830156551 >500 9.417785631569344E-4 0.2853267401422979 >1k 0.004238003534206204 3.0212420145712673 >5k 4.708892815784672E-4 1.06059418544209 >10k+ 0.0014126678447354015 5.74936921420727 >>END_MODULE >>Overrepresented sequences fail #Sequence Count Percentage Possible Source GAATGATACGGCTGTCTCTTATACACATCTGACGCCACGGTGTTCGTATGC 11041 1.9688893723485261 No Hit GAATCTGTCTCTTATACACATCTGACGCCACGGTGTTCGTATGCCGTCTTC 10815 1.9285878599718604 No Hit GAATGATACCTGTCTCTTATACACATCTGACGCCACGGTGTTCGTATGCCG 10626 1.8948843828073034 No Hit CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 5992 1.068525053809652 No Hit GCTGTCTCTTATACACATCTGACGCCACGGTGTTCGTATGCCGTCTTCTGC 3422 0.610229094482081 No Hit GAACTGTCTCTTATACACATCTGACGCCACGGTGTTCGTATGCCGTCTTCT 2957 0.5273078411407112 No Hit GAATGACTGTCTCTTATACACATCTGACGCCACGGTGTTCGTATGCCGTCT 2074 0.36984662243010985 No Hit GAATGATCTGTCTCTTATACACATCTGACGCCACGGTGTTCGTATGCCGTC 1722 0.3070761252770729 No Hit GAATCTATCTCTTATACACATCTGACGCCACGGTGTTCGTATGCCGTCTTC 1596 0.2846071405007017 No Hit GAATGCTGTCTCTTATACACATCTGACGCCACGGTGTTCGTATGCCGTCTT 1452 0.2589283007562775 No Hit GAATGAAACCTGTCTCTTATACACATCTGACGCCACGGTGTTCGTATGCCG 1329 0.23699429180791518 No Hit GAATGATACGGCGACTGTCTCTTATACACATCTGACGCCACGGTGTTCGTA 1324 0.23610266542790043 No Hit GAATGAAACGGCTGTCTCTTATACACATCTGACGCCACGGTGTTCGTATGC 1193 0.2127420542715145 No Hit CTGTCTCTTATACACATCTGACGCCACGGTGTTCGTATGCCGTCTTCTGCT 822 0.14658337687442155 Illumina Single End Adapter 1 (95% over 21bp) CCTGTCTCTTATACACATCTGACGCCACGGTGTTCGTATGCCGTCTTCTGC 790 0.1408769680423273 No Hit >>END_MODULE >>Adapter Content fail #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 3.5665055200589187E-4 0.0 0.0 0.16976566275480454 0.0 2 3.5665055200589187E-4 0.0 0.0 1.1584009929151369 0.0 3 3.5665055200589187E-4 0.0 0.0 1.4137627881513553 0.0 4 3.5665055200589187E-4 0.0 0.0 2.27239899210554 0.0 5 3.5665055200589187E-4 0.0 0.0 5.00059738967461 0.0 6 3.5665055200589187E-4 0.0 0.0 5.816435527388087 0.0 7 3.5665055200589187E-4 0.0 0.0 6.671148575270207 0.0 8 3.5665055200589187E-4 0.0 0.0 7.827053014321303 0.0 9 3.5665055200589187E-4 0.0 0.0 8.147325210022593 0.0 10 3.5665055200589187E-4 0.0 0.0 11.031914874646247 0.0 11 3.5665055200589187E-4 0.0 0.0 11.965982670349678 0.0 12 3.5665055200589187E-4 0.0 0.0 15.084535097089196 0.0 13 3.5665055200589187E-4 0.0 0.0 15.595971988665646 0.0 14 3.5665055200589187E-4 0.0 0.0 15.838137713477646 0.0 15 3.5665055200589187E-4 0.0 0.0 16.351179532538122 0.0 16 3.5665055200589187E-4 0.0 0.0 16.897389852935145 0.0 17 3.5665055200589187E-4 0.0 0.0 17.520101716737432 0.0 18 3.5665055200589187E-4 0.0 0.0 18.207902306280793 0.0 19 3.5665055200589187E-4 0.0 0.0 18.712206186817127 0.0 20 3.5665055200589187E-4 0.0 0.0 19.13251886235607 0.0 21 3.5665055200589187E-4 0.0 0.0 19.634682839580364 0.0 22 3.5665055200589187E-4 0.0 0.0 20.179644883045366 0.0 23 3.5665055200589187E-4 0.0 0.0 20.717652240746254 0.0 24 3.5665055200589187E-4 0.0 0.0 21.12762205027703 0.0 25 3.5665055200589187E-4 0.0 0.0 21.484807578110928 0.0 26 3.5665055200589187E-4 0.0 0.0 21.856794103853073 0.0 27 3.5665055200589187E-4 0.0 0.0 22.27782008049603 0.0 28 3.5665055200589187E-4 0.0 0.0 22.643743546854076 0.0 29 3.5665055200589187E-4 0.0 0.0 23.045688718964715 0.0 30 3.5665055200589187E-4 0.0 0.0 23.52056892896056 0.0 31 3.5665055200589187E-4 0.0 0.0 23.962102312343855 0.0 32 3.5665055200589187E-4 0.0 0.0 24.360659304210436 0.0 33 3.5665055200589187E-4 0.0 0.0 24.74405864761677 0.0 34 3.5665055200589187E-4 0.0 0.0 25.159021564875626 0.0 35 3.5665055200589187E-4 0.0 0.0 25.567564772198377 0.0 36 3.5665055200589187E-4 0.0 0.0 25.953638994744754 0.0 37 3.5665055200589187E-4 0.0 0.0 26.3620038767915 0.0 38 3.5665055200589187E-4 0.0 0.0 26.78873626226655 0.0 39 3.5665055200589187E-4 0.0 0.0 27.298211575806967 0.0 >>END_MODULE >>Kmer Content warn #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position TCACGCT 20 7.0301915E-4 45.000004 14 CCTACGC 20 7.0301915E-4 45.000004 39 ATCCGTG 20 7.0301915E-4 45.000004 16 CGCTCCA 20 7.0301915E-4 45.000004 17 AAGTTCG 20 7.0301915E-4 45.000004 1 CTCTCTA 20 7.0301915E-4 45.000004 15 ATCGCAA 20 7.0301915E-4 45.000004 14 TCGATAC 25 3.888241E-5 45.0 40 GTATGCG 25 3.888241E-5 45.0 1 CAGTACG 25 3.888241E-5 45.0 43 TTCGATG 25 3.888241E-5 45.0 1 CGTTTTT 3175 0.0 43.228344 1 TACGGCT 1435 0.0 42.334496 7 ACGGCTG 1585 0.0 41.735016 8 GATGAAT 295 0.0 40.42373 20 CGGCTGT 1630 0.0 40.306747 9 CTATCTC 225 0.0 40.0 5 CGATGAA 310 0.0 39.919353 19 CGTTTTA 200 0.0 39.375 1 CCGATGA 320 0.0 38.67188 18 >>END_MODULE