##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR2936599.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 606028 Sequences flagged as poor quality 0 Sequence length 51 %GC 47 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 31.15330809797567 31.0 31.0 33.0 30.0 34.0 2 31.172419426165128 31.0 31.0 34.0 28.0 34.0 3 30.984008989683645 31.0 31.0 34.0 28.0 34.0 4 34.93439577049245 35.0 35.0 37.0 32.0 37.0 5 35.13366544120073 35.0 35.0 37.0 33.0 37.0 6 35.09179608862957 35.0 35.0 37.0 32.0 37.0 7 31.048250245863226 35.0 35.0 37.0 0.0 37.0 8 32.921208261004445 35.0 35.0 37.0 17.0 37.0 9 35.98175991868362 38.0 34.0 39.0 32.0 39.0 10 36.02297583609998 37.0 35.0 39.0 32.0 39.0 11 36.25687261974694 37.0 35.0 39.0 32.0 39.0 12 36.31829387421043 38.0 35.0 39.0 32.0 39.0 13 36.09018065171906 38.0 35.0 39.0 31.0 39.0 14 37.18084312936036 39.0 36.0 40.0 32.0 41.0 15 37.23692469654868 39.0 36.0 41.0 32.0 41.0 16 37.38900842865346 39.0 36.0 40.0 32.0 41.0 17 37.11345680397606 39.0 35.0 40.0 32.0 41.0 18 37.032590903390606 39.0 35.0 40.0 31.0 41.0 19 36.84749384516887 39.0 35.0 40.0 31.0 41.0 20 36.74425274079746 39.0 35.0 40.0 31.0 41.0 21 36.92699182216003 39.0 35.0 40.0 31.0 41.0 22 37.00753925561195 39.0 35.0 40.0 32.0 41.0 23 37.096045067224615 39.0 35.0 40.0 32.0 41.0 24 36.97907357415829 39.0 35.0 40.0 31.0 41.0 25 36.81481878725075 39.0 35.0 40.0 31.0 41.0 26 36.67569155220551 38.0 35.0 40.0 31.0 41.0 27 36.73491653850977 39.0 35.0 40.0 31.0 41.0 28 36.6742790762143 39.0 35.0 40.0 31.0 41.0 29 36.61326539367818 39.0 35.0 40.0 31.0 41.0 30 36.44382932801785 38.0 35.0 40.0 30.0 41.0 31 36.46650319787204 38.0 35.0 40.0 30.0 41.0 32 36.26261657877194 38.0 35.0 40.0 30.0 41.0 33 36.08730124680708 38.0 35.0 40.0 30.0 41.0 34 35.97167457609219 38.0 35.0 40.0 29.0 41.0 35 35.91407327714231 38.0 35.0 40.0 29.0 41.0 36 35.84071693057086 38.0 35.0 40.0 29.0 41.0 37 35.73799395407473 38.0 35.0 40.0 29.0 41.0 38 35.58987868547328 38.0 35.0 40.0 28.0 41.0 39 35.52281412740005 38.0 35.0 40.0 27.0 41.0 40 35.334101724672784 38.0 34.0 40.0 26.0 41.0 41 35.152888975426876 38.0 34.0 40.0 25.0 41.0 42 35.11508709168553 38.0 34.0 40.0 25.0 41.0 43 35.07005451893312 38.0 34.0 40.0 25.0 41.0 44 34.96187304877002 38.0 34.0 40.0 25.0 41.0 45 34.93729002620341 38.0 34.0 40.0 25.0 41.0 46 34.80740988865201 38.0 34.0 40.0 24.0 41.0 47 34.622185773594616 37.0 33.0 40.0 24.0 41.0 48 34.515817750995005 37.0 33.0 40.0 23.0 41.0 49 34.455343647488235 37.0 33.0 40.0 24.0 41.0 50 34.28562211646987 37.0 33.0 40.0 23.0 41.0 51 32.38180744124034 35.0 30.0 39.0 18.0 40.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 7 2.0 8 19.0 9 56.0 10 53.0 11 49.0 12 18.0 13 18.0 14 40.0 15 56.0 16 91.0 17 188.0 18 396.0 19 719.0 20 1348.0 21 1925.0 22 2745.0 23 3608.0 24 4984.0 25 6624.0 26 8158.0 27 9380.0 28 10389.0 29 11925.0 30 14650.0 31 18843.0 32 25121.0 33 34628.0 34 50570.0 35 54336.0 36 61361.0 37 86674.0 38 110162.0 39 86887.0 40 5.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 47.83805368728838 18.167312401407194 21.83380965895965 12.160824252344776 2 31.34657144554377 30.99823770518854 22.046836119783244 15.608354729484446 3 29.288250707888086 29.438078768637755 26.241361785264044 15.032308738210116 4 26.921363369349272 21.8511355910948 33.96938755305035 17.258113486505575 5 29.684602031589304 26.5910155966391 24.373131274462565 19.351251097309035 6 24.308282785613866 37.18491554845651 25.352458962292175 13.154342703637456 7 63.34806312579617 16.828265360676404 16.152884025160557 3.6707874883668743 8 72.27702350386451 11.085296388945725 11.859353033193186 4.778327073996581 9 66.67860230880422 6.446731834172678 12.91804999108952 13.956615865933585 10 41.827440316289014 21.98792795052374 20.315892995043132 15.868738738144112 11 31.917667170493775 22.497475364174594 26.759984687176168 18.824872778155466 12 27.42035021484156 20.505488195264906 30.84939969770374 21.2247618921898 13 23.99905614922083 22.117294910466185 35.71237632584633 18.17127261446666 14 20.76818232820926 27.77841947896797 29.991683552575125 21.461714640247646 15 18.080352722976496 23.895430574164887 38.97509686021108 19.049119842647535 16 21.8069132119308 24.367520972628327 29.459199904954886 24.366365910485985 17 22.09617377414905 23.711115658022404 31.655138046426895 22.537572521401653 18 23.004382635785806 23.852858283775667 30.97975671091105 22.163002369527483 19 22.304910004158224 26.004079019451247 27.75267809408146 23.93833288230907 20 24.234028790748944 25.931640122238576 31.46603787283756 18.368293214174923 21 23.381097903067186 28.86846812358505 29.942180889331848 17.80825308401592 22 21.47805051911793 21.69454216636855 31.82823235890091 24.999174955612613 23 21.21981162586547 27.651197634432734 31.08981763218861 20.039173107513182 24 23.795435194413457 23.193317800497667 29.130172203264536 23.881074801824337 25 20.895239163867014 30.305035410905106 27.60582019312639 21.193905232101486 26 20.281901166282744 23.766723649732356 30.894777139010078 25.05659804497482 27 22.347152276792492 26.246972087098285 28.47987221712528 22.926003418983942 28 19.340690529150468 24.88828898994766 32.96266839155946 22.808352089342407 29 22.535262397116966 22.95735510570469 32.5268799461411 21.980502551037244 30 21.292250523078142 25.952266231923275 33.82318968760519 18.932293557393386 31 26.078663032071127 23.10074782023273 27.77874949672292 23.041839650973223 32 25.26714937263625 26.508181140145336 29.826014639587612 18.3986548476308 33 23.479773211798793 25.238272819077668 26.77879569920862 24.50315826991492 34 22.79020111281987 23.730256687809803 30.72960325265499 22.749938946715336 35 20.664391744275843 27.070036367956597 29.86611179681467 22.399460090952893 36 26.843314170302364 25.56796055627793 28.11107737596283 19.477647897456883 37 20.762737035252496 25.855736038598877 33.47172077857788 19.909806147570738 38 24.430059337192343 28.19770703663857 25.362524503818307 22.00970912235078 39 23.626136086121434 23.990145669837037 28.83084609952015 23.552872144521373 40 22.02769508999584 28.038143452117726 28.996680021385153 20.937481436501283 41 22.598790814945843 25.410047060531856 26.84611932121948 25.145042803302818 42 21.20826100444204 26.116285056136018 31.45976753549341 21.215686403928533 43 25.4569095817355 23.411294527645587 27.250061053284668 23.88173483733425 44 22.63690786564317 23.28143254107071 30.040361171431023 24.041298421855096 45 20.961407723735537 22.82122278178566 29.124891919185252 27.09247757529355 46 25.51169252905806 25.443543862659812 27.396258918729828 21.648504689552297 47 19.218913977571994 24.462896103810387 34.63453833816259 21.68365158045503 48 22.38576435412225 25.833129822384443 28.064379863636663 23.716725959856642 49 21.448678938926914 22.67419987195311 32.9240563142297 22.95306487489027 50 21.896513032401145 23.61937072214485 30.387209831888956 24.09690641356505 51 21.235487469225845 23.606995056334032 28.28747186598639 26.870045608453736 >>END_MODULE >>Per sequence GC content fail #GC Content Count 0 210.0 1 601.0 2 992.0 3 4138.5 4 7285.0 5 4901.5 6 2518.0 7 2315.0 8 2112.0 9 2092.5 10 2073.0 11 2060.5 12 2048.0 13 1968.0 14 1888.0 15 1801.5 16 1715.0 17 1687.5 18 1660.0 19 1687.0 20 1714.0 21 1951.5 22 2189.0 23 2618.5 24 3048.0 25 3505.5 26 4259.5 27 4556.0 28 5653.0 29 6750.0 30 8251.5 31 9753.0 32 10772.5 33 11792.0 34 13504.5 35 15217.0 36 17760.0 37 20303.0 38 21077.0 39 21851.0 40 24949.5 41 28048.0 42 32246.5 43 36445.0 44 62158.5 45 87872.0 46 67706.5 47 47541.0 48 47714.5 49 47888.0 50 42530.0 51 37172.0 52 34491.0 53 31810.0 54 30331.0 55 28852.0 56 28305.5 57 27759.0 58 25992.5 59 24226.0 60 22967.5 61 21709.0 62 19966.5 63 18224.0 64 15814.0 65 13404.0 66 11636.0 67 9868.0 68 8745.0 69 7622.0 70 6305.0 71 4988.0 72 4370.0 73 3752.0 74 3075.0 75 1836.0 76 1274.0 77 1006.0 78 738.0 79 573.5 80 409.0 81 291.0 82 173.0 83 138.5 84 104.0 85 66.0 86 28.0 87 34.0 88 40.0 89 30.5 90 21.0 91 16.0 92 11.0 93 9.5 94 8.0 95 6.5 96 5.0 97 3.0 98 1.0 99 1.0 100 1.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 44 0.0 45 0.0 46 0.0 47 0.0 48 0.0 49 0.0 50 0.0 51 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 51 606028.0 >>END_MODULE >>Sequence Duplication Levels fail #Total Deduplicated Percentage 29.40650445850075 #Duplication Level Percentage of deduplicated Percentage of total 1 74.45327152156729 21.89410460948935 2 8.64545443776301 5.08465188939686 3 3.4181533829715116 3.0154782808857346 4 2.1197220806480956 2.4933446726144286 5 1.482543326631223 2.1798208472250797 6 1.0152948291266162 1.7913763151642752 7 0.8387013716377576 1.7264292937091488 8 0.6506795215065886 1.5307368200190903 9 0.5402384583748691 1.429787217136874 >10 6.53749388981031 43.61338753974393 >50 0.25973880511794956 4.547503083744312 >100 0.029732519808317995 1.5276020661493175 >500 0.0022439637591183392 0.4381545451071909 >1k 0.005048918458016263 3.0246850845407924 >5k 0.0 0.0 >10k+ 0.0016829728193387544 5.7029377350736405 >>END_MODULE >>Overrepresented sequences fail #Sequence Count Percentage Possible Source GAATGATACCTGTCTCTTATACACATCTGACGCTTGTACAGTCGTATGCCG 12470 2.0576607021457756 No Hit GAATGATACGGCTGTCTCTTATACACATCTGACGCTTGTACAGTCGTATGC 11637 1.9202083072069276 No Hit GAATCTGTCTCTTATACACATCTGACGCTTGTACAGTCGTATGCCGTCTTC 10463 1.7264878850482155 No Hit CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 3938 0.6498049595068215 No Hit GCTGTCTCTTATACACATCTGACGCTTGTACAGTCGTATGCCGTCTTCTGC 2910 0.48017583345984016 No Hit GAATGACTGTCTCTTATACACATCTGACGCTTGTACAGTCGTATGCCGTCT 2345 0.3869458176849915 No Hit GAACTGTCTCTTATACACATCTGACGCTTGTACAGTCGTATGCCGTCTTCT 2182 0.3600493706561413 No Hit GAATGATCTGTCTCTTATACACATCTGACGCTTGTACAGTCGTATGCCGTC 1962 0.32374741761106746 No Hit GAATGCTGTCTCTTATACACATCTGACGCTTGTACAGTCGTATGCCGTCTT 1545 0.25493871570290483 No Hit GAATGATACGGCGACTGTCTCTTATACACATCTGACGCTTGTACAGTCGTA 1365 0.22523711775693533 No Hit GAATGAAACGGCTGTCTCTTATACACATCTGACGCTTGTACAGTCGTATGC 1047 0.17276429471905588 No Hit GAATGAAACCTGTCTCTTATACACATCTGACGCTTGTACAGTCGTATGCCG 1041 0.17177424145419024 No Hit GAATCTGTCTCTTATACACATCTGACGCTTGTACAGTCGTATGCCGTCTTT 836 0.13794742157128054 No Hit GAATCTATCTCTTATACACATCTGACGCTTGTACAGTCGTATGCCGTCTTC 751 0.12392166698568383 No Hit >>END_MODULE >>Adapter Content fail #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.09917033536404259 0.0 2 0.0 0.0 0.0 0.8276845294276832 0.0 3 0.0 0.0 0.0 0.9902182737431274 0.0 4 0.0 0.0 0.0 1.5756697710336816 0.0 5 0.0 0.0 0.0 4.015821051172553 0.0 6 0.0 0.0 0.0 4.620248569373032 0.0 7 0.0 0.0 0.0 5.326816582732151 0.0 8 0.0 0.0 0.0 6.1455906327760434 0.0 9 0.0 0.0 0.0 6.33139062881583 0.0 10 0.0 0.0 0.0 9.081263571980173 0.0 11 0.0 0.0 0.0 9.67892572620407 0.0 12 0.0 0.0 0.0 12.393651778465681 0.0 13 0.0 0.0 0.0 12.754196175754256 0.0 14 0.0 0.0 0.0 12.950061713320176 0.0 15 0.0 0.0 0.0 13.380899892414211 0.0 16 0.0 0.0 0.0 13.795237183760486 0.0 17 0.0 0.0 0.0 14.189113374299538 0.0 18 0.0 0.0 0.0 14.633482281346737 0.0 19 0.0 0.0 0.0 15.030988667190295 0.0 20 0.0 0.0 0.0 15.32173430930584 0.0 21 0.0 0.0 0.0 15.655217250688088 0.0 22 0.0 0.0 0.0 16.03160250021451 0.0 23 0.0 0.0 0.0 16.369375672411177 0.0 24 0.0 0.0 0.0 16.65946127901681 0.0 25 0.0 0.0 0.0 16.905654524213404 0.0 26 0.0 0.0 0.0 17.16191331093613 0.0 27 0.0 0.0 0.0 17.465034618862497 0.0 28 0.0 0.0 0.0 17.727068716296937 0.0 29 0.0 0.0 0.0 18.01517421637284 0.0 30 0.0 0.0 0.0 18.381823942128086 0.0 31 0.0 0.0 0.0 18.665474202512094 0.0 32 1.650088774776083E-4 0.0 0.0 18.95275465820061 0.0 33 1.650088774776083E-4 0.0 0.0 19.231949678892725 0.0 34 1.650088774776083E-4 0.0 0.0 19.538206155491164 0.0 35 1.650088774776083E-4 0.0 0.0 19.857498333410337 0.0 36 1.650088774776083E-4 0.0 0.0 20.148078966648406 0.0 37 1.650088774776083E-4 0.0 0.0 20.444929937230622 0.0 38 1.650088774776083E-4 0.0 0.0 20.79359369534081 0.0 39 1.650088774776083E-4 0.0 0.0 21.241097771060083 0.0 >>END_MODULE >>Kmer Content warn #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position CGAACGT 20 7.030643E-4 45.000004 36 ACCGACA 20 7.030643E-4 45.000004 16 TTCGTTC 20 7.030643E-4 45.000004 14 ATTCGAA 30 2.1637952E-6 45.000004 13 CGACAAT 30 2.1637952E-6 45.000004 20 GTGCGAT 20 7.030643E-4 45.000004 30 AAGTCGC 20 7.030643E-4 45.000004 22 CGTTCCA 25 3.8886163E-5 44.999996 26 TTACGTA 25 3.8886163E-5 44.999996 44 AACGGCT 100 0.0 42.749996 7 ACGGCTG 1590 0.0 42.45283 8 TACGGCT 1500 0.0 42.15 7 CGTTTTA 145 0.0 41.89655 1 CGTTTTT 1920 0.0 41.601566 1 TTAGACG 55 6.002665E-11 40.909092 1 CATACGA 55 6.002665E-11 40.909092 18 GCGATCA 55 6.002665E-11 40.909092 9 GATACCT 1575 0.0 40.57143 5 CGGCTGT 1665 0.0 40.0 9 TGATACC 1615 0.0 39.566563 4 >>END_MODULE