##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR2936595.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 209549 Sequences flagged as poor quality 0 Sequence length 51 %GC 45 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 31.862394952970426 31.0 31.0 34.0 30.0 34.0 2 31.989062224109873 33.0 31.0 34.0 30.0 34.0 3 31.821478508606578 33.0 31.0 34.0 30.0 34.0 4 35.6311316207665 37.0 35.0 37.0 33.0 37.0 5 35.739359290667096 37.0 35.0 37.0 35.0 37.0 6 35.73396198502498 37.0 35.0 37.0 35.0 37.0 7 27.065874807324303 35.0 18.0 37.0 0.0 37.0 8 31.3058043703382 36.0 25.0 37.0 17.0 37.0 9 35.99021231311054 39.0 32.0 39.0 32.0 39.0 10 36.522102229072914 37.0 35.0 39.0 32.0 39.0 11 36.93601496547347 39.0 37.0 39.0 33.0 39.0 12 37.10357004805559 39.0 37.0 39.0 34.0 39.0 13 37.14208609919398 39.0 37.0 39.0 34.0 39.0 14 38.3139122591852 40.0 38.0 41.0 34.0 41.0 15 38.37168394981603 40.0 38.0 41.0 34.0 41.0 16 38.28482121126801 40.0 37.0 41.0 34.0 41.0 17 38.20307422130385 40.0 37.0 41.0 34.0 41.0 18 38.10274446549494 40.0 37.0 41.0 33.0 41.0 19 37.99394890932431 40.0 37.0 41.0 33.0 41.0 20 38.04549771175238 40.0 37.0 41.0 34.0 41.0 21 37.99342874458957 40.0 37.0 41.0 33.0 41.0 22 38.03454084724814 40.0 37.0 41.0 34.0 41.0 23 37.988661363213374 40.0 37.0 41.0 33.0 41.0 24 37.94718180473302 40.0 37.0 41.0 33.0 41.0 25 37.80918066896048 40.0 36.0 41.0 33.0 41.0 26 37.65128919727606 39.0 36.0 41.0 33.0 41.0 27 37.54843974440346 39.0 36.0 41.0 33.0 41.0 28 37.45366477530315 39.0 36.0 41.0 32.0 41.0 29 37.351769753136495 39.0 36.0 41.0 32.0 41.0 30 37.284744856811535 39.0 36.0 41.0 32.0 41.0 31 37.11611603968523 39.0 36.0 41.0 31.0 41.0 32 36.938625333454226 39.0 35.0 41.0 31.0 41.0 33 36.92523944280335 39.0 35.0 41.0 31.0 41.0 34 36.70787739383152 39.0 35.0 41.0 30.0 41.0 35 36.655956363428125 39.0 35.0 41.0 30.0 41.0 36 36.463915361085 39.0 35.0 41.0 30.0 41.0 37 36.439357859021044 39.0 35.0 41.0 30.0 41.0 38 36.36079866761474 39.0 35.0 40.0 30.0 41.0 39 36.38595746102344 39.0 35.0 40.0 30.0 41.0 40 36.19692291540404 39.0 35.0 40.0 29.0 41.0 41 36.11279462082854 39.0 35.0 40.0 29.0 41.0 42 35.97998081594281 39.0 35.0 40.0 28.0 41.0 43 35.92196097332843 39.0 35.0 40.0 28.0 41.0 44 35.71209597755179 39.0 35.0 40.0 27.0 41.0 45 35.63315024170958 38.0 35.0 40.0 27.0 41.0 46 35.43669976950498 38.0 34.0 40.0 26.0 41.0 47 35.262668874583035 38.0 34.0 40.0 25.0 41.0 48 35.21572520031114 38.0 34.0 40.0 24.0 41.0 49 35.03212136540857 38.0 34.0 40.0 24.0 41.0 50 34.7679063130819 38.0 34.0 40.0 23.0 41.0 51 32.4559840419186 36.0 30.0 39.0 15.0 40.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 8 9.0 9 11.0 10 16.0 11 4.0 12 2.0 13 4.0 14 8.0 15 9.0 16 8.0 17 25.0 18 41.0 19 113.0 20 204.0 21 301.0 22 542.0 23 847.0 24 1253.0 25 1646.0 26 2264.0 27 2617.0 28 2977.0 29 3504.0 30 4432.0 31 5468.0 32 6984.0 33 9413.0 34 13622.0 35 17600.0 36 20637.0 37 31869.0 38 41307.0 39 41807.0 40 5.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 39.44423499992842 21.11630215367289 25.576834057905312 13.862628788493383 2 30.691628211062806 25.06907692234275 27.30053591284139 16.938758953753062 3 30.029730516490176 24.82235658485605 28.571360397806718 16.576552500847058 4 26.333697607719436 25.905635436103253 29.296250518971696 18.464416437205617 5 23.987706932507432 30.15905587714568 27.25567766966199 18.5975595206849 6 24.94786422268777 34.42249784060053 26.6224128962677 14.007225040444002 7 62.115781988938146 26.677769877212487 7.159184725290982 4.04726340855838 8 83.36140950326654 3.8077013013662677 8.280163589423 4.550725605944194 9 77.46398217123442 6.575550348605816 10.391364310972612 5.569103169187159 10 35.53631847443796 30.374757216689176 19.223188848431633 14.865735460441234 11 25.070031353048687 27.320101742313252 28.596175596161277 19.013691308476776 12 22.886771113200254 24.303146280822148 32.28027812110771 20.52980448486989 13 21.549613694171768 26.754601549041034 33.99825339180812 17.697531364979074 14 19.255162277080778 29.502407551455747 30.81474977212967 20.42768039933381 15 17.458446473139933 28.42342363838529 35.7839932426306 18.334136645844172 16 20.747414685825273 27.559186634152393 31.839808350314247 19.853590329708087 17 21.054264157786484 26.836682589752275 29.451822724040678 22.65723052842056 18 21.196951548325213 26.737899011687006 32.33134016387575 19.73380927611203 19 20.90823625977695 28.738385771347037 28.89538962247493 21.45798834640108 20 21.558203570525272 28.075056430715488 30.610024385704538 19.756715613054705 21 20.556528544636336 29.017556752835855 31.350185398164633 19.07572930436318 22 20.000572658423565 26.013963321227973 30.175281199146735 23.81018282120172 23 18.693002591279367 28.54988570692296 30.06361280655121 22.69349889524646 24 19.381624345618448 26.299338102305427 31.81928809013644 22.49974946193969 25 18.137523920419568 29.92808364630707 29.78969119394509 22.14470123932827 26 18.246806236250233 30.082224205317132 30.12851409455545 21.542455463877182 27 19.802051071587076 28.491665433860337 29.971987458780525 21.734296035772065 28 17.474671795140992 27.839312046347153 31.982972956205945 22.703043202305906 29 18.443418961674833 27.050475067883884 31.548706985001125 22.957398985440157 30 18.804670983874892 27.12301180153568 32.11372996292037 21.95858725166906 31 18.526931648444993 27.648903120511193 29.01039852254127 24.813766708502545 32 18.904886207999084 28.09987162907005 30.143784985850562 22.8514571770803 33 18.170928995127632 25.714272079561347 31.678032345656625 24.4367665796544 34 16.811342454509447 26.521243241437563 31.035223265202887 25.6321910388501 35 16.60995757555512 26.106543099704606 31.944795727968163 25.338703596772117 36 18.54267975509308 26.531264763849983 30.370462278512424 24.55559320254451 37 17.129167879589023 26.26259252012656 32.019718538384815 24.588521061899606 38 16.985048842991375 26.820934483104192 30.766551021479465 25.427465652424967 39 18.270189788545878 25.09389212069731 31.393611995285113 25.242306095471704 40 19.173081236369534 25.156884547289653 30.968890331139733 24.701143885201073 41 17.221747658065656 26.263069735479526 29.31533913309059 27.199843473364226 42 18.87577607146777 25.273325093414904 30.43154584369288 25.41935299142444 43 19.320540780437987 25.003221203632563 30.889195367193352 24.787042648736097 44 18.543156970446052 25.671322697793837 30.383824308395653 25.40169602336446 45 18.251101174426985 25.134455425699954 30.947415640255976 25.667027759617085 46 20.084085345193724 25.99916964528583 29.759149411354862 24.157595598165585 47 17.378274293840583 25.413626407188772 31.772998200898115 25.435101098072526 48 18.21149230013028 24.603314737841746 31.093443538265515 26.09174942376246 49 19.34726484020444 22.673933065774595 32.51459085941713 25.46421123460384 50 18.125593536595257 23.945234766092895 32.25546292275315 25.673708774558694 51 17.975270700408974 23.192188939102547 29.6894759698209 29.14306439066758 >>END_MODULE >>Per sequence GC content fail #GC Content Count 0 54.0 1 139.0 2 224.0 3 817.5 4 1411.0 5 1019.5 6 628.0 7 567.5 8 507.0 9 518.5 10 530.0 11 495.0 12 460.0 13 479.5 14 499.0 15 475.5 16 452.0 17 491.0 18 530.0 19 572.5 20 615.0 21 727.5 22 840.0 23 965.5 24 1091.0 25 1363.5 26 2001.0 27 2366.0 28 2919.5 29 3473.0 30 3906.5 31 4340.0 32 4930.5 33 5521.0 34 6484.0 35 7447.0 36 8025.0 37 8603.0 38 9572.0 39 10541.0 40 11615.5 41 12690.0 42 14144.5 43 15599.0 44 16932.5 45 18266.0 46 20780.0 47 23294.0 48 23482.5 49 23671.0 50 22202.0 51 20733.0 52 17333.5 53 13934.0 54 11565.0 55 9196.0 56 7631.5 57 6067.0 58 5398.0 59 4729.0 60 4149.5 61 3570.0 62 2985.5 63 2401.0 64 1910.0 65 1419.0 66 1159.5 67 900.0 68 723.0 69 546.0 70 430.5 71 315.0 72 242.5 73 170.0 74 146.0 75 95.5 76 69.0 77 49.0 78 29.0 79 28.5 80 28.0 81 20.5 82 13.0 83 9.5 84 6.0 85 5.5 86 5.0 87 3.5 88 2.0 89 1.5 90 1.0 91 2.5 92 4.0 93 2.0 94 0.0 95 1.0 96 2.0 97 1.0 98 0.0 99 0.0 100 0.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 44 0.0 45 0.0 46 0.0 47 0.0 48 0.0 49 0.0 50 0.0 51 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 51 209549.0 >>END_MODULE >>Sequence Duplication Levels warn #Total Deduplicated Percentage 52.861134407334774 #Duplication Level Percentage of deduplicated Percentage of total 1 71.54669734715038 37.82039584868618 2 11.876913254052083 12.55654215733406 3 5.396651560161081 8.558193704136835 4 3.286886519774808 6.949942004138918 5 2.2194214272797357 5.866056718697645 6 1.5983655867806696 5.069485086892289 7 1.1400400826984223 4.218466842888924 8 0.8358830827225185 3.534858238768991 9 0.607280327515525 2.8891374314155605 >10 1.456080008857252 10.001376640017499 >50 0.025841691060997565 0.9131325690771216 >100 0.008945200751883773 1.2677726635115616 >500 9.939111946537526E-4 0.35464009443444017 >1k 0.0 0.0 >5k 0.0 0.0 >10k+ 0.0 0.0 >>END_MODULE >>Overrepresented sequences warn #Sequence Count Percentage Possible Source CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 675 0.32212036325632665 No Hit GAATCTGTCTCTTATACACATCTGACGCATCTTCCCTCGTATGCCGTCTTC 438 0.20902032460188308 No Hit GCTGTCTCTTATACACATCTGACGCATCTTCCCTCGTATGCCGTCTTCTGC 365 0.17418360383490258 TruSeq Adapter, Index 13 (95% over 21bp) CTGTCTCTTATACACATCTGACGCATCTTCCCTCGTATGCCGTCTTCTGCT 347 0.16559372748140053 TruSeq Adapter, Index 16 (95% over 22bp) CCTGTCTCTTATACACATCTGACGCATCTTCCCTCGTATGCCGTCTTCTGC 334 0.15938992789276016 TruSeq Adapter, Index 13 (95% over 21bp) GAATGATACCTGTCTCTTATACACATCTGACGCATCTTCCCTCGTATGCCG 267 0.12741649924361367 No Hit GAATGATACGGCTGTCTCTTATACACATCTGACGCATCTTCCCTCGTATGC 241 0.11500890006633294 No Hit >>END_MODULE >>Adapter Content fail #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.24815198354561463 0.0 2 0.0 0.0 0.0 0.9782914735932885 0.0 3 0.0 0.0 0.0 1.3653131248538528 0.0 4 0.0 0.0 0.0 1.8248715097662123 0.0 5 0.0 0.0 0.0 3.2374289545643262 0.0 6 0.0 0.0 0.0 4.1331621720934 0.0 7 0.0 0.0 0.0 4.926294088733423 0.0 8 0.0 0.0 0.0 6.604660485137128 0.0 9 0.0 0.0 0.0 7.208337906647133 0.0 10 0.0 0.0 0.0 8.765491603395864 0.0 11 0.0 0.0 0.0 10.458651675741711 0.0 12 0.0 0.0 0.0 11.89459267283547 0.0 13 0.0 0.0 0.0 12.514972631699507 0.0 14 0.0 0.0 0.0 12.788417028952656 0.0 15 0.0 0.0 0.0 13.209320970274256 0.0 16 0.0 0.0 0.0 14.05590100644718 0.0 17 0.0 0.0 0.0 15.192627977227284 0.0 18 0.0 0.0 0.0 16.344625839302502 0.0 19 0.0 0.0 0.0 17.03277037828861 0.0 20 0.0 0.0 0.0 17.722346563333634 0.0 21 0.0 0.0 0.0 18.577993691213035 0.0 22 0.0 0.0 0.0 19.46800032450644 0.0 23 0.0 0.0 0.0 20.396661401390606 0.0 24 0.0 0.0 0.0 21.104848985201553 0.0 25 0.0 0.0 0.0 21.7233200826537 0.0 26 0.0 0.0 0.0 22.294546860161585 0.0 27 0.0 0.0 0.0 22.9101546654959 0.0 28 0.0 0.0 0.0 23.54771437706694 0.0 29 0.0 0.0 0.0 24.170003197342865 0.0 30 0.0 0.0 0.0 24.911118640508903 0.0 31 0.0 0.0 0.0 25.590673303141507 0.0 32 0.0 0.0 0.0 26.23061909147741 0.0 33 0.0 0.0 0.0 26.84909018892956 0.0 34 0.0 0.0 0.0 27.416499243613664 0.0 35 0.0 0.0 0.0 28.049764017007956 0.0 36 0.0 0.0 0.0 28.597607242220196 0.0 37 0.0 0.0 0.0 29.218464416437207 0.0 38 0.0 0.0 0.0 29.7877823325332 0.0 39 0.0 0.0 0.0 30.402435707161573 0.0 >>END_MODULE >>Kmer Content warn #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position TAGACGG 20 7.02007E-4 45.000004 2 CGGTTTT 30 2.1569795E-6 45.000004 1 CGCATGG 40 6.7684596E-9 45.000004 2 CGGTTAA 20 7.02007E-4 45.000004 35 TACGGTT 20 7.02007E-4 45.000004 33 CGATTGA 40 6.7684596E-9 45.000004 10 TACGGGT 20 7.02007E-4 45.000004 4 TACGCGG 20 7.02007E-4 45.000004 2 ACAGCGG 30 2.1569795E-6 45.000004 2 ACGGTTA 20 7.02007E-4 45.000004 34 CGGGTCT 25 3.8798542E-5 45.0 6 GCCCTAC 25 3.8798542E-5 45.0 26 GGTATGA 25 3.8798542E-5 45.0 8 AGCTGCG 25 3.8798542E-5 45.0 1 TGCACGG 25 3.8798542E-5 45.0 2 GGCGATT 120 0.0 43.125004 8 GGCGATA 60 3.6379788E-12 41.250004 8 CGTTTTT 340 0.0 41.02941 1 CAGTCTC 100 0.0 40.5 6 GCGACTG 45 1.9153958E-8 40.0 20 >>END_MODULE