##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR2936593.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 311236 Sequences flagged as poor quality 0 Sequence length 51 %GC 47 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 31.944116361860452 33.0 31.0 34.0 30.0 34.0 2 32.060336850492874 33.0 31.0 34.0 30.0 34.0 3 31.699202534411185 33.0 31.0 34.0 30.0 34.0 4 35.590224138595794 37.0 35.0 37.0 33.0 37.0 5 35.75569664177666 37.0 35.0 37.0 35.0 37.0 6 35.75899638859258 37.0 35.0 37.0 35.0 37.0 7 27.123716408127596 35.0 19.0 37.0 0.0 37.0 8 31.29330797208549 35.0 25.0 37.0 17.0 37.0 9 36.013002994512206 39.0 32.0 39.0 32.0 39.0 10 36.73998187870298 38.0 35.0 39.0 33.0 39.0 11 37.062132915215464 39.0 37.0 39.0 34.0 39.0 12 37.123742112095 39.0 37.0 39.0 34.0 39.0 13 37.08743204513617 39.0 37.0 39.0 33.0 39.0 14 38.25828952948888 40.0 38.0 41.0 34.0 41.0 15 38.309022735159175 40.0 38.0 41.0 33.0 41.0 16 38.27109331825367 40.0 37.0 41.0 33.0 41.0 17 38.15320207173977 40.0 37.0 41.0 33.0 41.0 18 38.001571155007774 40.0 37.0 41.0 33.0 41.0 19 37.81995977329101 40.0 37.0 41.0 33.0 41.0 20 37.84371345217134 40.0 36.0 41.0 33.0 41.0 21 37.78501522960069 40.0 36.0 41.0 33.0 41.0 22 37.809736020254725 40.0 36.0 41.0 33.0 41.0 23 37.75773368119369 39.0 36.0 41.0 33.0 41.0 24 37.67354997493863 39.0 35.0 41.0 33.0 41.0 25 37.572481975092856 39.0 35.0 41.0 33.0 41.0 26 37.4527368299297 39.0 35.0 41.0 33.0 41.0 27 37.311400352144354 39.0 35.0 41.0 33.0 41.0 28 37.27203151306404 39.0 35.0 41.0 33.0 41.0 29 37.16467246719531 39.0 35.0 41.0 32.0 41.0 30 36.97109267565449 39.0 35.0 41.0 31.0 41.0 31 36.821646596152114 39.0 35.0 41.0 31.0 41.0 32 36.50169003585703 39.0 35.0 41.0 30.0 41.0 33 36.344474932205785 39.0 35.0 41.0 30.0 41.0 34 36.06320284285879 39.0 35.0 41.0 29.0 41.0 35 35.5666375355036 39.0 35.0 41.0 25.0 41.0 36 35.414659615211605 38.0 35.0 40.0 25.0 41.0 37 35.226275238083 38.0 34.0 40.0 24.0 41.0 38 35.00496086570962 38.0 34.0 40.0 23.0 41.0 39 34.91671271960827 38.0 34.0 40.0 23.0 41.0 40 34.58647135935431 38.0 34.0 40.0 21.0 41.0 41 34.459583724247835 38.0 33.0 40.0 21.0 41.0 42 34.32810471796322 38.0 33.0 40.0 21.0 41.0 43 34.24177794342557 38.0 33.0 40.0 20.0 41.0 44 34.09247002274801 38.0 33.0 40.0 20.0 41.0 45 33.95226130653266 38.0 33.0 40.0 20.0 41.0 46 33.74689945893149 37.0 33.0 40.0 18.0 41.0 47 33.598124895577634 37.0 33.0 40.0 18.0 41.0 48 33.44709480908378 37.0 32.0 40.0 17.0 41.0 49 33.289789741546606 37.0 32.0 40.0 15.0 41.0 50 33.12593337531648 36.0 32.0 40.0 15.0 41.0 51 31.00403552288296 35.0 28.0 39.0 9.0 40.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 7 1.0 8 7.0 9 11.0 10 12.0 11 16.0 12 8.0 13 13.0 14 9.0 15 24.0 16 50.0 17 84.0 18 132.0 19 272.0 20 513.0 21 807.0 22 1316.0 23 2161.0 24 3231.0 25 4581.0 26 5707.0 27 6154.0 28 6588.0 29 6877.0 30 7598.0 31 8826.0 32 10558.0 33 14133.0 34 21147.0 35 24938.0 36 28604.0 37 44514.0 38 54708.0 39 57626.0 40 10.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 42.68625737382565 18.666221131231605 22.52824223418885 16.119279260753895 2 35.02101299335553 24.866981968666863 23.766530864038867 16.345474173938747 3 30.7181688493619 24.73557043529669 29.312483131771387 15.233777583570024 4 26.682645966404916 24.448328599519336 30.63912914958424 18.229896284491513 5 25.693364520813788 28.250587978254444 27.782133172255136 18.273914328676632 6 25.561631687851023 34.08378208176432 27.00041126347852 13.354174966906143 7 59.35849323343058 26.612281355627243 10.124792761762778 3.9044326491794004 8 79.52871775758588 5.582580421288026 11.264763716279608 3.623938104846483 9 73.25887750774332 6.938143402434166 12.810857355832873 6.992121733989641 10 38.98263697001632 27.32395995321878 19.631083807785732 14.062319268979168 11 29.908493876029763 24.619902581963526 27.877237851662407 17.594365690344304 12 27.09937153799689 22.214653831818943 31.157706692027915 19.528267938156255 13 23.329242118520995 23.697772751224154 33.68344278939454 19.28954234086031 14 21.18039044326492 25.612718323073164 32.553110822655476 20.65378041100644 15 20.331516919636545 23.899548895372 35.90330167461347 19.865632510377974 16 24.295068693852897 25.2364765001478 30.866287961546863 19.60216684445244 17 24.043169813260675 24.259404439075173 31.010551478620723 20.686874269043425 18 24.926743692888998 23.585960493002094 31.506638049582953 19.980657764525954 19 24.30181598529733 25.920523332776412 28.956161883586734 20.821498798339526 20 25.375599223740185 26.160534128442727 30.019663535066638 18.444203112750454 21 24.387602976519425 26.576938400442106 30.91126990450976 18.124188718528707 22 23.906617486409026 23.093729517150972 30.94757675847267 22.05207623796733 23 22.435707951522318 25.872649693480188 31.25698826613888 20.434654088858615 24 22.890346875040162 24.111927926075392 31.4314539449164 21.56627125396805 25 22.761505738410722 27.238494261589274 28.839530131475794 21.160469868524206 26 22.20533614363377 25.130126334999808 29.849053451400227 22.8154840699662 27 22.054646634708067 25.50604685833258 30.169389145214566 22.269917361744785 28 20.247979025562596 25.930804919739366 31.543587502731047 22.277628551966995 29 24.225346682260408 24.64335745222275 29.562775514400645 21.568520351116195 30 23.729902710483366 23.960917117557095 32.10907478569317 20.20010538626637 31 24.950841162333408 24.0952203472606 30.260959529103314 20.69297896130268 32 26.460306648331173 24.581346630852472 29.272641982289965 19.68570473852639 33 24.76609389659294 24.02228533974219 29.52261306532663 21.68900769833824 34 25.053978331555477 24.317880964926935 31.119793340102042 19.50834736341554 35 23.61552005552057 25.188924160444166 31.276266241694405 19.91928954234086 36 24.82681951959285 26.144469148813123 30.10480792710355 18.92390340449048 37 24.077548869668032 25.8845377784061 30.104165327918363 19.933748024007507 38 23.832397280520247 26.197162281998228 29.616753845956122 20.353686591525403 39 25.191815856777495 24.39949106144533 28.955197984808954 21.45349509696822 40 26.0802092302947 23.670783585446415 29.970183397807453 20.27882378645144 41 22.24646249148556 25.029238262925883 30.258710431955173 22.46558881363338 42 23.059671760336208 24.297639090593634 31.323175982212852 21.319513166857305 43 23.138390160521276 24.37603619118611 30.08810034828876 22.397473300003856 44 23.46065365189117 24.12992070326055 29.58783688262283 22.82158876222545 45 22.973884769114115 23.93424925137195 29.16179362284569 23.93007235666825 46 23.85360305363133 25.003534295518513 28.396136693698672 22.746725957151487 47 21.79085966918994 24.813967535889166 31.86777879165649 21.527394003264405 48 22.900628462003112 24.5109820200748 30.139829582696088 22.448559935226005 49 22.90223495996607 23.878664421853514 30.976172422213367 22.24292819596705 50 21.82845172152322 24.490418846148902 30.903237414694956 22.777892017632922 51 22.204372244855993 23.68106517240936 29.64920510480793 24.46535747792672 >>END_MODULE >>Per sequence GC content warn #GC Content Count 0 130.0 1 305.0 2 480.0 3 3119.0 4 5758.0 5 3927.0 6 2096.0 7 1814.5 8 1533.0 9 1508.5 10 1484.0 11 1436.5 12 1389.0 13 1368.5 14 1348.0 15 1280.5 16 1213.0 17 1236.5 18 1260.0 19 1232.5 20 1205.0 21 1289.5 22 1374.0 23 1494.0 24 1614.0 25 1839.0 26 2440.0 27 2816.0 28 3337.5 29 3859.0 30 4440.0 31 5021.0 32 5863.5 33 6706.0 34 7753.5 35 8801.0 36 9396.5 37 9992.0 38 10807.0 39 11622.0 40 12759.0 41 13896.0 42 15094.5 43 16293.0 44 17828.5 45 19364.0 46 22495.0 47 25626.0 48 25587.5 49 25549.0 50 24836.0 51 24123.0 52 22897.0 53 21671.0 54 19994.5 55 18318.0 56 17053.5 57 15789.0 58 14767.5 59 13746.0 60 12717.5 61 11689.0 62 10799.0 63 9909.0 64 8768.5 65 7628.0 66 6447.0 67 5266.0 68 4435.5 69 3605.0 70 3052.0 71 2499.0 72 2112.0 73 1725.0 74 1463.5 75 956.0 76 710.0 77 557.0 78 404.0 79 301.0 80 198.0 81 155.5 82 113.0 83 87.5 84 62.0 85 54.0 86 46.0 87 31.5 88 17.0 89 14.5 90 12.0 91 9.0 92 6.0 93 5.0 94 4.0 95 2.5 96 1.0 97 0.5 98 0.0 99 0.0 100 0.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 44 0.0 45 0.0 46 0.0 47 0.0 48 0.0 49 0.0 50 0.0 51 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 51 311236.0 >>END_MODULE >>Sequence Duplication Levels warn #Total Deduplicated Percentage 50.737030217973654 #Duplication Level Percentage of deduplicated Percentage of total 1 71.52524203070773 36.28978366259898 2 10.54434423625611 10.699774242872854 3 5.522280311014083 8.405523090361276 4 3.486730146845013 7.076253312895806 5 2.448996068443094 6.212739376414798 6 1.7564384201103647 5.346988151828969 7 1.2857832771979005 4.566577749226855 8 1.0094649632640422 4.097380347609071 9 0.72883167754065 3.328087936247675 >10 1.6641806642288335 10.665838254348662 >50 0.0119649064420925 0.41344241194827963 >100 0.01259463836009737 1.0511789299148686 >500 0.0025189276720194737 0.9029275549967839 >1k 6.297319180048684E-4 0.9435049787351389 >5k 0.0 0.0 >10k+ 0.0 0.0 >>END_MODULE >>Overrepresented sequences warn #Sequence Count Percentage Possible Source CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 2953 0.9487976969245203 No Hit GAATGATACCTGTCTCTTATACACATCTGACGCGTTGGGTTTCGTATGCCG 929 0.29848732151807633 No Hit GAATCTGTCTCTTATACACATCTGACGCGTTGGGTTTCGTATGCCGTCTTC 753 0.24193859322186378 No Hit GAATGATACGGCTGTCTCTTATACACATCTGACGCGTTGGGTTTCGTATGC 618 0.19856314822192805 No Hit CGTTTTATTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 526 0.16900358570345334 No Hit >>END_MODULE >>Adapter Content fail #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 3.212995925921166E-4 0.0 0.0 0.08546569162950302 0.0 2 3.212995925921166E-4 0.0 0.0 0.45463892351784496 0.0 3 3.212995925921166E-4 0.0 0.0 0.633602796591654 0.0 4 3.212995925921166E-4 0.0 0.0 0.903815753961624 0.0 5 3.212995925921166E-4 0.0 0.0 1.9473968307008187 0.0 6 3.212995925921166E-4 0.0 0.0 2.5138480124407203 0.0 7 3.212995925921166E-4 0.0 0.0 3.0606999190325026 0.0 8 3.212995925921166E-4 0.0 0.0 3.8321402408461744 0.0 9 3.212995925921166E-4 0.0 0.0 4.2671798892159005 0.0 10 3.212995925921166E-4 0.0 0.0 5.604750093176881 0.0 11 3.212995925921166E-4 0.0 0.0 6.378760811731291 0.0 12 3.212995925921166E-4 0.0 0.0 7.488529604544461 0.0 13 3.212995925921166E-4 0.0 0.0 7.799868909766222 0.0 14 3.212995925921166E-4 0.0 0.0 7.976262386099294 0.0 15 3.212995925921166E-4 0.0 0.0 8.210168489506355 0.0 16 3.212995925921166E-4 0.0 0.0 8.578056523024328 0.0 17 3.212995925921166E-4 0.0 0.0 8.97004202598671 0.0 18 3.212995925921166E-4 0.0 0.0 9.414078062949017 0.0 19 3.212995925921166E-4 0.0 0.0 9.69232351013379 0.0 20 3.212995925921166E-4 0.0 0.0 9.97185415568893 0.0 21 3.212995925921166E-4 0.0 0.0 10.30889742831806 0.0 22 3.212995925921166E-4 0.0 0.0 10.665861275687902 0.0 23 3.212995925921166E-4 0.0 0.0 11.031178912465139 0.0 24 3.212995925921166E-4 0.0 0.0 11.337698723798018 0.0 25 3.212995925921166E-4 0.0 0.0 11.59441709827912 0.0 26 3.212995925921166E-4 0.0 0.0 11.851135472760221 0.0 27 3.212995925921166E-4 0.0 0.0 12.135806911796836 0.0 28 3.212995925921166E-4 0.0 0.0 12.413409759796425 0.0 29 3.212995925921166E-4 0.0 0.0 12.67848192368492 0.0 30 3.212995925921166E-4 0.0 0.0 13.013276099165907 0.0 31 3.212995925921166E-4 0.0 0.0 13.298911436980298 0.0 32 3.212995925921166E-4 0.0 0.0 13.618283232016863 0.0 33 3.212995925921166E-4 0.0 0.0 13.916770553534938 0.0 34 3.212995925921166E-4 0.0 0.0 14.20690408564562 0.0 35 3.212995925921166E-4 0.0 0.0 14.522098985978486 0.0 36 3.212995925921166E-4 0.0 0.0 14.82187150586693 0.0 37 3.212995925921166E-4 0.0 0.0 15.135459908236836 0.0 38 3.212995925921166E-4 0.0 0.0 15.487925561310389 0.0 39 3.212995925921166E-4 0.0 0.0 15.961521160791168 0.0 >>END_MODULE >>Kmer Content warn #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position AACCCGC 20 7.025349E-4 45.000004 21 GTAGCCG 20 7.025349E-4 45.000004 43 CTCGCGC 20 7.025349E-4 45.000004 33 CGCGTGA 20 7.025349E-4 45.000004 41 TCGACTC 20 7.025349E-4 45.000004 27 TCGGGCA 25 3.8842285E-5 45.0 5 CGCAATC 45 3.8198777E-10 45.0 20 ATTTGCG 25 3.8842285E-5 45.0 12 CGTTTTA 205 0.0 42.80488 1 CGTTTTT 1265 0.0 41.086956 1 GCGCAAT 50 1.0768417E-9 40.5 19 AACGGCT 45 1.920489E-8 40.0 7 TTAATCG 40 3.447385E-7 39.375004 20 CGTTGAT 40 3.447385E-7 39.375004 25 CGAATAT 35 6.2336167E-6 38.571426 14 AGCTACG 35 6.2336167E-6 38.571426 9 TGCACGG 35 6.2336167E-6 38.571426 2 TACGGCT 125 0.0 37.8 7 ATAGGCG 30 1.1380099E-4 37.499996 5 TATGCGG 30 1.1380099E-4 37.499996 2 >>END_MODULE