SRR2936592.fastq FastQC Report

Basic Statistics

Measure	Value
Filename	SRR2936592.fastq
File type	Conventional base calls
Encoding	Sanger / Illumina 1.9
Total Sequences	258335
Sequences flagged as poor quality	0
Sequence length	51
%GC	48

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	589	0.22799852904174814	No Hit

Adapter graph

Kmer graph

Sequence	Count	PValue	Obs/Exp Max	Max Obs/Exp Position
GCGCGAC	25	3.8823822E-5	45.000004	9
GCGATCT	25	3.8823822E-5	45.000004	9
CGGGTAC	20	7.023122E-4	45.0	6
CTCGTCC	20	7.023122E-4	45.0	37
CCTCGTC	20	7.023122E-4	45.0	36
TCAACGG	20	7.023122E-4	45.0	2
GCTCAAA	20	7.023122E-4	45.0	9
GGTACCT	85	0.0	42.35294	8
ATCCTGC	75	0.0	42.0	20
ACAACGA	65	0.0	41.53846	13
CTATCTC	50	1.0750227E-9	40.500004	5
AGGTATT	40	3.4443656E-7	39.375	7
TAGGCGA	40	3.4443656E-7	39.375	6
CCAGTAG	80	0.0	39.375	26
AACGAGC	70	0.0	38.571426	15
ACAAGCG	70	0.0	38.571426	14
CAGACGG	35	6.2294985E-6	38.571426	2
AGGCGAT	100	0.0	38.250004	7
ACACGCG	65	9.094947E-12	38.07692	36
AGGGTAC	65	9.094947E-12	38.07692	6