SRR2936591.fastq FastQC Report

Basic Statistics

Measure	Value
Filename	SRR2936591.fastq
File type	Conventional base calls
Encoding	Sanger / Illumina 1.9
Total Sequences	305024
Sequences flagged as poor quality	0
Sequence length	51
%GC	49

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	1401	0.4593081200167856	No Hit

Adapter graph

Kmer graph

Sequence	Count	PValue	Obs/Exp Max	Max Obs/Exp Position
GCGCGAA	20	7.0251286E-4	45.000004	1
CCCAGCG	20	7.0251286E-4	45.000004	34
GCGCATA	20	7.0251286E-4	45.000004	1
TATAGCG	40	6.7866495E-9	45.000004	1
TAGTACG	20	7.0251286E-4	45.000004	1
TAATCGT	45	3.8198777E-10	45.000004	21
CGCATAG	25	3.884045E-5	45.0	2
ACGGGTG	30	2.160241E-6	44.999996	5
CGTTGAT	55	6.002665E-11	40.909092	25
TACACGC	220	0.0	40.909092	35
TTAATCG	50	1.0768417E-9	40.5	20
TTACACG	225	0.0	40.0	34
CGTTTTT	590	0.0	39.66102	1
TCGATCA	40	3.447094E-7	39.375004	17
TTATCGT	40	3.447094E-7	39.375004	42
GGCGATA	80	0.0	39.375004	8
ACACGCG	235	0.0	39.255318	36
AGGCGAT	115	0.0	39.130436	7
CTATCTC	70	0.0	38.571426	5
ATAGCGG	70	0.0	38.571426	2