SRR2936586.fastq FastQC Report

Basic Statistics

Measure	Value
Filename	SRR2936586.fastq
File type	Conventional base calls
Encoding	Sanger / Illumina 1.9
Total Sequences	216859
Sequences flagged as poor quality	0
Sequence length	51
%GC	49

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
GAATCTGTCTCTTATACACATCTGACGCCACGTACTTCGTATGCCGTCTTC	2236	1.0310847140307757	No Hit
GAATGATACCTGTCTCTTATACACATCTGACGCCACGTACTTCGTATGCCG	2183	1.0066448706302251	No Hit
GAATGATACGGCTGTCTCTTATACACATCTGACGCCACGTACTTCGTATGC	1699	0.7834583761799142	No Hit
CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	533	0.2457818213678012	No Hit
GAATCTATCTCTTATACACATCTGACGCCACGTACTTCGTATGCCGTCTTC	526	0.24255391752244548	No Hit
GAATGACTGTCTCTTATACACATCTGACGCCACGTACTTCGTATGCCGTCT	484	0.22318649445031102	No Hit
GAATGAAACCTGTCTCTTATACACATCTGACGCCACGTACTTCGTATGCCG	462	0.2130416537934787	No Hit
GAACTGTCTCTTATACACATCTGACGCCACGTACTTCGTATGCCGTCTTCT	446	0.205663587861237	No Hit
GCTGTCTCTTATACACATCTGACGCCACGTACTTCGTATGCCGTCTTCTGC	441	0.20335794225741147	No Hit
GAATGAAACGGCTGTCTCTTATACACATCTGACGCCACGTACTTCGTATGC	412	0.18998519775522343	No Hit
GAATGATCTGTCTCTTATACACATCTGACGCCACGTACTTCGTATGCCGTC	342	0.15770615930166607	No Hit

Adapter graph

Kmer graph

Sequence	Count	PValue	Obs/Exp Max	Max Obs/Exp Position
TCACGAC	20	7.020617E-4	45.000004	25
CTCACGA	20	7.020617E-4	45.000004	24
CTCGTTT	20	7.020617E-4	45.000004	7
CGACGGT	20	7.020617E-4	45.000004	28
CAACGAA	20	7.020617E-4	45.000004	16
CCAATCC	20	7.020617E-4	45.000004	43
TACGCGG	30	2.1573323E-6	45.000004	2
TCTCGTT	20	7.020617E-4	45.000004	6
GTAAGGC	20	7.020617E-4	45.000004	4
AATCCTA	70	0.0	41.785713	13
GATACCT	235	0.0	41.17021	5
TGAAACG	50	1.0732037E-9	40.5	4
TACGGCT	245	0.0	40.408165	7
TGATACC	240	0.0	40.312504	4
CGGCTGT	300	0.0	39.75	9
ATCTATC	125	0.0	39.6	3
TATCTCT	145	0.0	38.793106	6
ATGATAC	605	0.0	37.561985	3
ACAACGA	60	1.546141E-10	37.500004	13
CGACCCG	30	1.13687E-4	37.500004	32