##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR2936586.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 216859 Sequences flagged as poor quality 0 Sequence length 51 %GC 49 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 31.95017038721012 33.0 31.0 34.0 30.0 34.0 2 32.051614182487235 33.0 31.0 34.0 30.0 34.0 3 31.94850571108416 33.0 31.0 34.0 30.0 34.0 4 35.71037402182985 37.0 35.0 37.0 35.0 37.0 5 35.76997496068874 37.0 35.0 37.0 35.0 37.0 6 35.72041741408012 37.0 35.0 37.0 35.0 37.0 7 26.742187319871437 35.0 10.0 37.0 0.0 37.0 8 31.01472385282603 35.0 19.0 37.0 17.0 37.0 9 35.83525239902425 39.0 32.0 39.0 32.0 39.0 10 36.61482806800732 37.0 35.0 39.0 33.0 39.0 11 36.9253293614745 39.0 37.0 39.0 33.0 39.0 12 36.849552013059174 39.0 35.0 39.0 33.0 39.0 13 36.707187619605364 39.0 35.0 39.0 33.0 39.0 14 37.737709756108806 40.0 37.0 41.0 33.0 41.0 15 37.79546156719343 40.0 36.0 41.0 33.0 41.0 16 37.83367994872244 40.0 36.0 41.0 33.0 41.0 17 37.680040948265926 40.0 36.0 41.0 33.0 41.0 18 37.59318727836982 39.0 36.0 41.0 33.0 41.0 19 37.465057940874026 39.0 36.0 41.0 32.0 41.0 20 37.53883398890523 39.0 36.0 41.0 32.0 41.0 21 37.51086189643962 39.0 35.0 41.0 32.0 41.0 22 37.58674530455273 39.0 35.0 41.0 33.0 41.0 23 37.614454553419506 39.0 35.0 41.0 33.0 41.0 24 37.486763288588435 39.0 35.0 41.0 33.0 41.0 25 37.41581396206752 39.0 35.0 41.0 33.0 41.0 26 37.23486228378808 39.0 35.0 41.0 32.0 41.0 27 37.13643888425198 39.0 35.0 41.0 32.0 41.0 28 37.08769753618711 39.0 35.0 41.0 32.0 41.0 29 37.022682941450434 39.0 35.0 41.0 32.0 41.0 30 36.88600427005566 39.0 35.0 41.0 31.0 41.0 31 36.77688728620901 39.0 35.0 41.0 31.0 41.0 32 36.583319115185446 39.0 35.0 40.0 30.0 41.0 33 36.44677417123569 39.0 35.0 40.0 30.0 41.0 34 36.30755006709429 39.0 35.0 40.0 30.0 41.0 35 36.18619471638254 39.0 35.0 40.0 30.0 41.0 36 36.07953093945836 38.0 35.0 40.0 29.0 41.0 37 35.956990486906236 38.0 35.0 40.0 29.0 41.0 38 35.70205525249125 38.0 35.0 40.0 28.0 41.0 39 35.59701465007217 38.0 35.0 40.0 27.0 41.0 40 35.35447917771455 38.0 34.0 40.0 26.0 41.0 41 35.242669199802634 38.0 34.0 40.0 26.0 41.0 42 35.26111897592445 38.0 34.0 40.0 26.0 41.0 43 35.26103597268271 38.0 34.0 40.0 26.0 41.0 44 35.1043857990676 38.0 34.0 40.0 26.0 41.0 45 35.001683121290796 38.0 34.0 40.0 25.0 41.0 46 34.86940823299932 38.0 34.0 40.0 24.0 41.0 47 34.65729806002979 37.0 34.0 40.0 24.0 41.0 48 34.55717309403806 37.0 33.0 40.0 23.0 41.0 49 34.44221360423132 37.0 33.0 40.0 24.0 41.0 50 34.21217934233765 37.0 33.0 40.0 23.0 41.0 51 31.90716087411636 35.0 29.0 39.0 15.0 40.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 8 12.0 9 7.0 10 14.0 11 13.0 12 9.0 13 10.0 14 11.0 15 18.0 16 31.0 17 68.0 18 140.0 19 226.0 20 327.0 21 553.0 22 831.0 23 1103.0 24 1635.0 25 2115.0 26 2611.0 27 3224.0 28 3615.0 29 4233.0 30 5170.0 31 6404.0 32 8310.0 33 11318.0 34 16875.0 35 19248.0 36 20600.0 37 30995.0 38 37889.0 39 39239.0 40 5.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 45.869435900746566 18.836202325013026 22.979908604208266 12.314453170032142 2 30.27312677822917 27.705559833809062 24.767706205414576 17.253607182547185 3 31.4951189482567 27.783029526097604 24.833186540563222 15.888664985082473 4 27.20984602898658 24.61691698292439 29.626623750916494 18.54661323717254 5 27.706020962929827 28.578016130296646 23.921995397931376 19.79396750884215 6 26.210579224288594 35.72413411479348 24.60538875490526 13.459897906012664 7 59.84487616377462 27.69495386403147 8.39254999792492 4.067619974268995 8 79.94826131265016 7.499804020123675 8.504604374270839 4.047330292955331 9 74.97867277816461 6.374187836336052 9.321264047145842 9.325875338353493 10 44.40396755495507 23.6190335655887 17.065466501275022 14.911532378181214 11 34.39931015083533 23.4723945051854 23.39215803817227 18.736137305807 12 29.668125371785354 22.26884749998847 28.5918500039196 19.47117712430658 13 25.661835570578116 23.915539590240662 31.648674945471484 18.773949893709737 14 21.920695013810818 26.39733651819846 30.77022397041396 20.911744497576766 15 20.64936202786142 23.695580999635705 36.02340691417004 19.631650058332834 16 25.766973010112558 24.45091049944895 28.00806053703098 21.774055953407515 17 25.836603507348094 23.478389183755343 27.813925177188864 22.8710821317077 18 26.81096933952476 23.717254068311668 28.773073748380284 20.698702843783288 19 25.973558856215327 26.15247695507219 25.438649076127806 22.435315112584675 20 26.458205562139455 27.243508454802427 27.65990805085332 18.638377932204797 21 25.09187997731245 28.07123522657579 28.097519586459402 18.739365209652355 22 24.58924923567848 22.358767678537667 29.434332907557447 23.617650178226405 23 23.58352662328979 26.390419581386986 29.138288012026248 20.88776578329698 24 25.074818199844138 24.125353340188788 27.406287034432513 23.393541425534565 25 23.690047450186526 28.512535795147997 25.46677795249448 22.330638802170995 26 22.135581184087354 24.984436892174177 26.939624364218222 25.940357559520244 27 23.067523137153636 25.52026893050323 27.302071853139598 24.110136079203535 28 20.162870805454236 25.877182869975424 28.47380094900373 25.48614537556661 29 24.14472076326092 25.13384272730207 26.203201158356354 24.518235351080655 30 23.905855878704596 27.047067449356494 28.301799786958348 20.745276884980562 31 26.584554941229094 24.354534513209046 25.426659718987914 23.63425082657395 32 28.826103597268272 25.060062067979654 24.931868172406958 21.181966162345116 33 25.077123845447964 24.510857285148415 26.683697702193594 23.72832116721003 34 22.92088407675033 25.983242567751397 28.650413402256763 22.445459953241507 35 21.53057977764354 27.75213387500634 27.231057968541773 23.48622837880835 36 23.862048612231913 26.828031116993067 26.310644243494618 22.9992760272804 37 23.989781378683844 28.676236633019613 25.79786866120382 21.536113327092718 38 22.725365329545927 26.450827496207214 26.70444851262802 24.11935866161884 39 25.106636109176932 25.67613057332184 26.10820855947874 23.109024758022496 40 24.62429504885663 24.11105833744507 28.139021207328263 23.125625406370037 41 20.829202384959814 26.831259020838427 27.33850105368004 25.001037540521722 42 21.734398849021712 23.761983593025885 29.751589742643837 24.752027815308566 43 23.224768167334535 23.11225266186785 28.604761619301023 25.058217551496593 44 22.718909521855217 23.356651095873353 28.070774097455025 25.8536652848164 45 22.15587086540102 23.505595801880485 27.352334927302994 26.9861984054155 46 24.67594151038232 25.33904518604254 26.375663449522502 23.609349854052635 47 20.522090390530252 25.346423251974787 31.134977104939153 22.996509252555807 48 21.86950968140589 26.120659045739398 28.026505701861577 23.983325570993134 49 22.812979862491297 23.290709631603946 30.501385693007897 23.394924812896857 50 21.696586261118973 24.67732489774462 28.924785229112004 24.701303612024404 51 21.971880346215745 23.95934685671335 26.75563384503295 27.313138952037956 >>END_MODULE >>Per sequence GC content warn #GC Content Count 0 86.0 1 237.5 2 389.0 3 771.5 4 1154.0 5 825.5 6 497.0 7 434.0 8 371.0 9 365.5 10 360.0 11 365.0 12 370.0 13 385.5 14 401.0 15 407.0 16 413.0 17 431.5 18 450.0 19 473.5 20 497.0 21 591.5 22 686.0 23 816.5 24 947.0 25 1121.0 26 1511.0 27 1727.0 28 2063.5 29 2400.0 30 2767.5 31 3135.0 32 3715.0 33 4295.0 34 4791.0 35 5287.0 36 5814.5 37 6342.0 38 7072.5 39 7803.0 40 8588.0 41 9373.0 42 10331.0 43 11289.0 44 12590.5 45 13892.0 46 18896.5 47 23901.0 48 20199.0 49 16497.0 50 16288.0 51 16079.0 52 15162.0 53 14245.0 54 13598.5 55 12952.0 56 12525.5 57 12099.0 58 11728.0 59 11357.0 60 10654.0 61 9951.0 62 8851.0 63 7751.0 64 6851.0 65 5951.0 66 5192.5 67 4434.0 68 3694.5 69 2955.0 70 2432.5 71 1910.0 72 1602.5 73 1295.0 74 1083.5 75 689.0 76 506.0 77 402.0 78 298.0 79 220.5 80 143.0 81 121.0 82 99.0 83 71.0 84 43.0 85 34.5 86 26.0 87 20.0 88 14.0 89 14.5 90 15.0 91 8.5 92 2.0 93 2.0 94 2.0 95 2.0 96 2.0 97 1.0 98 0.0 99 0.5 100 1.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 44 0.0 45 0.0 46 0.0 47 0.0 48 0.0 49 0.0 50 0.0 51 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 51 216859.0 >>END_MODULE >>Sequence Duplication Levels fail #Total Deduplicated Percentage 43.84922922267464 #Duplication Level Percentage of deduplicated Percentage of total 1 68.68263032253316 30.116804006289797 2 10.178670957293539 8.92653751977091 3 5.67456436466122 7.464758206945526 4 3.7090786720089177 6.505609635754108 5 2.824662691527063 6.192964091875366 6 2.0874741037532467 5.492047828312406 7 1.642637052928248 5.041985806445663 8 1.219884111009454 4.279278240700179 9 1.0074560158164285 3.9758552792367388 >10 2.9340316118244627 16.431413960223 >50 0.018929236205319114 0.5842505960093886 >100 0.014722739270803758 1.6789711287057487 >500 0.00210324846725768 0.4883357388902466 >1k 0.0031548727008865194 2.8211879608409154 >5k 0.0 0.0 >10k+ 0.0 0.0 >>END_MODULE >>Overrepresented sequences fail #Sequence Count Percentage Possible Source GAATCTGTCTCTTATACACATCTGACGCCACGTACTTCGTATGCCGTCTTC 2236 1.0310847140307757 No Hit GAATGATACCTGTCTCTTATACACATCTGACGCCACGTACTTCGTATGCCG 2183 1.0066448706302251 No Hit GAATGATACGGCTGTCTCTTATACACATCTGACGCCACGTACTTCGTATGC 1699 0.7834583761799142 No Hit CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 533 0.2457818213678012 No Hit GAATCTATCTCTTATACACATCTGACGCCACGTACTTCGTATGCCGTCTTC 526 0.24255391752244548 No Hit GAATGACTGTCTCTTATACACATCTGACGCCACGTACTTCGTATGCCGTCT 484 0.22318649445031102 No Hit GAATGAAACCTGTCTCTTATACACATCTGACGCCACGTACTTCGTATGCCG 462 0.2130416537934787 No Hit GAACTGTCTCTTATACACATCTGACGCCACGTACTTCGTATGCCGTCTTCT 446 0.205663587861237 No Hit GCTGTCTCTTATACACATCTGACGCCACGTACTTCGTATGCCGTCTTCTGC 441 0.20335794225741147 No Hit GAATGAAACGGCTGTCTCTTATACACATCTGACGCCACGTACTTCGTATGC 412 0.18998519775522343 No Hit GAATGATCTGTCTCTTATACACATCTGACGCCACGTACTTCGTATGCCGTC 342 0.15770615930166607 No Hit >>END_MODULE >>Adapter Content fail #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.07101388459782623 0.0 2 0.0 0.0 0.0 0.489719126252542 0.0 3 0.0 0.0 0.0 0.5939343075454558 0.0 4 0.0 0.0 0.0 0.9457758266892312 0.0 5 0.0 0.0 0.0 2.4910195103730994 0.0 6 0.0 0.0 0.0 2.8008982795272503 0.0 7 0.0 0.0 0.0 3.2869283728136716 0.0 8 0.0 0.0 0.0 3.9864612490143365 0.0 9 0.0 0.0 0.0 4.2059587104985265 0.0 10 0.0 0.0 0.0 5.925048072710839 0.0 11 0.0 0.0 0.0 6.511604314324054 0.0 12 0.0 0.0 0.0 8.058692514490982 0.0 13 0.0 0.0 0.0 8.308163368824905 0.0 14 0.0 0.0 0.0 8.439124039122195 0.0 15 0.0 0.0 0.0 8.69873973411295 0.0 16 0.0 0.0 0.0 9.026602538976938 0.0 17 0.0 0.0 0.0 9.382133091086835 0.0 18 0.0 0.0 0.0 9.778704134944826 0.0 19 0.0 0.0 0.0 10.018030148621916 0.0 20 0.0 0.0 0.0 10.261967453506657 0.0 21 0.0 0.0 0.0 10.553862186950969 0.0 22 0.0 0.0 0.0 10.891408703351026 0.0 23 0.0 0.0 0.0 11.187914728002989 0.0 24 0.0 0.0 0.0 11.442919131786091 0.0 25 0.0 0.0 0.0 11.679939499859355 0.0 26 0.0 0.0 0.0 11.920187771777975 0.0 27 0.0 0.0 0.0 12.201015406323926 0.0 28 0.0 0.0 0.0 12.466625779884625 0.0 29 0.0 0.0 0.0 12.740075348498333 0.0 30 0.0 0.0 0.0 13.086844447313693 0.0 31 0.0 0.0 0.0 13.372283373067292 0.0 32 0.0 0.0 0.0 13.654494394975536 0.0 33 0.0 0.0 0.0 13.940394449849903 0.0 34 0.0 0.0 0.0 14.252578864607878 0.0 35 0.0 0.0 0.0 14.58413070243799 0.0 36 0.0 0.0 0.0 14.856196883689401 0.0 37 0.0 0.0 0.0 15.14947500449601 0.0 38 0.0 0.0 0.0 15.535901207697167 0.0 39 0.0 0.0 0.0 16.25710715257379 0.0 >>END_MODULE >>Kmer Content warn #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position TCACGAC 20 7.020617E-4 45.000004 25 CTCACGA 20 7.020617E-4 45.000004 24 CTCGTTT 20 7.020617E-4 45.000004 7 CGACGGT 20 7.020617E-4 45.000004 28 CAACGAA 20 7.020617E-4 45.000004 16 CCAATCC 20 7.020617E-4 45.000004 43 TACGCGG 30 2.1573323E-6 45.000004 2 TCTCGTT 20 7.020617E-4 45.000004 6 GTAAGGC 20 7.020617E-4 45.000004 4 AATCCTA 70 0.0 41.785713 13 GATACCT 235 0.0 41.17021 5 TGAAACG 50 1.0732037E-9 40.5 4 TACGGCT 245 0.0 40.408165 7 TGATACC 240 0.0 40.312504 4 CGGCTGT 300 0.0 39.75 9 ATCTATC 125 0.0 39.6 3 TATCTCT 145 0.0 38.793106 6 ATGATAC 605 0.0 37.561985 3 ACAACGA 60 1.546141E-10 37.500004 13 CGACCCG 30 1.13687E-4 37.500004 32 >>END_MODULE