SRR2936583.fastq FastQC Report

Basic Statistics

Measure	Value
Filename	SRR2936583.fastq
File type	Conventional base calls
Encoding	Sanger / Illumina 1.9
Total Sequences	268884
Sequences flagged as poor quality	0
Sequence length	51
%GC	44

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	3895	1.4485800568274796	No Hit
GAATCTGTCTCTTATACACATCTGACGCAATCTCGGTCGTATGCCGTCTTC	2175	0.8088990047752934	No Hit
GAATGATACCTGTCTCTTATACACATCTGACGCAATCTCGGTCGTATGCCG	1477	0.5493075080703947	No Hit
GAATGATACGGCTGTCTCTTATACACATCTGACGCAATCTCGGTCGTATGC	1226	0.4559587033813838	No Hit
CGTTTTATTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	662	0.24620282352241116	No Hit
GAACTGTCTCTTATACACATCTGACGCAATCTCGGTCGTATGCCGTCTTCT	534	0.19859865220689965	No Hit
GAATCTATCTCTTATACACATCTGACGCAATCTCGGTCGTATGCCGTCTTC	423	0.15731690989422947	No Hit
CGGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	367	0.1364900849436932	No Hit
GCTGTCTCTTATACACATCTGACGCAATCTCGGTCGTATGCCGTCTTCTGC	338	0.1257047648800226	No Hit
GAATGAAACCTGTCTCTTATACACATCTGACGCAATCTCGGTCGTATGCCG	337	0.1253328572916202	No Hit
GATACTGAAGCTACGAATATACTGACTATGAAGACCTATGCTTTGATTCAT	334	0.12421713452641288	No Hit
GAATCTGTCTCTTATACACATCTGACGCAATCTCGGTCGTATGCCGTCTTT	300	0.11157227652073014	No Hit
GAATGACTGTCTCTTATACACATCTGACGCAATCTCGGTCGTATGCCGTCT	277	0.10301840198747415	No Hit
GAATGAAACGGCTGTCTCTTATACACATCTGACGCAATCTCGGTCGTATGC	274	0.10190267922226684	No Hit

Adapter graph

Kmer graph

Sequence	Count	PValue	Obs/Exp Max	Max Obs/Exp Position
GTATGAC	20	7.0236356E-4	45.000004	14
CGCACTT	80	0.0	45.000004	35
CGTTTAG	20	7.0236356E-4	45.000004	2
CCGCACT	80	0.0	45.000004	34
ATGGGCG	35	1.2072815E-7	45.0	5
CTAGCGG	35	1.2072815E-7	45.0	2
TCGGGAC	30	2.1592787E-6	44.999996	5
CTACGAA	30	2.1592787E-6	44.999996	11
TACGAAT	30	2.1592787E-6	44.999996	12
CGAATAT	30	2.1592787E-6	44.999996	14
CGTTTTA	285	0.0	44.210526	1
CGTTTTT	1805	0.0	42.880886	1
CAACGCA	85	0.0	42.35294	17
AACGCAA	85	0.0	42.35294	18
CGCAAGC	85	0.0	42.35294	20
CCCGCAC	85	0.0	42.35294	33
AACGGCT	45	1.918852E-8	40.0	7
TCAACGC	90	0.0	40.0	16
CTACGGG	40	3.4450568E-7	39.375004	3
CGGTTTT	145	0.0	38.793102	1