SRR2936582.fastq FastQC Report

Basic Statistics

Measure	Value
Filename	SRR2936582.fastq
File type	Conventional base calls
Encoding	Sanger / Illumina 1.9
Total Sequences	190376
Sequences flagged as poor quality	0
Sequence length	51
%GC	47

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
GAATGATACCTGTCTCTTATACACATCTGACGCGAACTGGTTCGTATGCCG	319	0.16756313821069882	No Hit
CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	260	0.1365718367861495	No Hit
GAATGATACGGCTGTCTCTTATACACATCTGACGCGAACTGGTTCGTATGC	225	0.11818716644955247	No Hit
GATACTGAAGCTACGAATATACTGACTATGAAGACCTATGCTTTGATTCAT	216	0.11345967979157036	No Hit
GAATCTGTCTCTTATACACATCTGACGCGAACTGGTTCGTATGCCGTCTTC	213	0.11188385090557633	No Hit
GCTGTCTCTTATACACATCTGACGCGAACTGGTTCGTATGCCGTCTTCTGC	207	0.10873219313358826	No Hit

Adapter graph

Kmer graph

Sequence	Count	PValue	Obs/Exp Max	Max Obs/Exp Position
CGAATAT	25	3.8785085E-5	45.000004	14
GTAAGCG	25	3.8785085E-5	45.000004	1
TTTAGCG	20	7.018447E-4	45.0	1
CCCTCGT	20	7.018447E-4	45.0	14
TTTCGAT	20	7.018447E-4	45.0	13
AGGCGTT	20	7.018447E-4	45.0	36
TACGGGA	55	1.8189894E-12	45.0	4
AATGCGG	20	7.018447E-4	45.0	2
GTAGCGG	20	7.018447E-4	45.0	2
CATAGTG	20	7.018447E-4	45.0	41
TCGTAAG	20	7.018447E-4	45.0	2
AATAGCG	20	7.018447E-4	45.0	1
TTCGATT	20	7.018447E-4	45.0	14
CTACGAA	30	2.1559335E-6	44.999996	11
GCTACGA	30	2.1559335E-6	44.999996	10
TAGGGCG	45	1.9137588E-8	40.0	5
CACAACG	45	1.9137588E-8	40.0	12
CGTTTTA	45	1.9137588E-8	40.0	1
TAAGCGG	40	3.437999E-7	39.375	2
GGTATGC	35	6.22086E-6	38.57143	8