SRR2936581.fastq FastQC Report

Basic Statistics

Measure	Value
Filename	SRR2936581.fastq
File type	Conventional base calls
Encoding	Sanger / Illumina 1.9
Total Sequences	322980
Sequences flagged as poor quality	0
Sequence length	51
%GC	47

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	2015	0.6238776394823209	No Hit
CGTTTTATTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	348	0.10774660969719488	No Hit

Adapter graph

Kmer graph

Sequence	Count	PValue	Obs/Exp Max	Max Obs/Exp Position
TTAATCG	20	7.0257456E-4	45.000004	20
ATAGCGG	40	6.7884685E-9	45.000004	2
ACGGGTA	25	3.884556E-5	45.000004	5
GGTATTC	20	7.0257456E-4	45.000004	9
TAATCGT	20	7.0257456E-4	45.000004	21
CTACGAA	60	0.0	44.999996	11
GCTACGA	60	0.0	44.999996	10
AGGCGAT	135	0.0	43.333336	7
CGTTTTT	815	0.0	42.515335	1
TACGAAT	65	0.0	41.53846	12
GACACGA	95	0.0	40.263157	25
CGAGACA	95	0.0	40.263157	22
TCGTAAC	45	1.9208528E-8	40.000004	34
CTAACGG	40	3.4479308E-7	39.375004	2
CGTTTTA	110	0.0	38.863636	1
CGAATAT	70	0.0	38.571426	14
TGTACGG	35	6.234348E-6	38.571426	2
ACACGAC	100	0.0	38.250004	26
CACGACC	100	0.0	38.250004	27
TCGATCA	30	1.13810514E-4	37.499996	17