##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR2936580.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 126476 Sequences flagged as poor quality 0 Sequence length 51 %GC 48 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 32.00143110155286 33.0 31.0 34.0 30.0 34.0 2 32.13148739681837 33.0 31.0 34.0 30.0 34.0 3 32.01910243840729 33.0 31.0 34.0 30.0 34.0 4 35.756530883329646 37.0 35.0 37.0 35.0 37.0 5 35.8378822859673 37.0 35.0 37.0 35.0 37.0 6 35.8077342736962 37.0 35.0 37.0 35.0 37.0 7 26.568107783294856 35.0 10.0 37.0 0.0 37.0 8 31.011266959739398 35.0 19.0 37.0 17.0 37.0 9 35.896707675764574 39.0 32.0 39.0 32.0 39.0 10 36.674119991144565 38.0 35.0 39.0 33.0 39.0 11 37.0041826117208 39.0 37.0 39.0 34.0 39.0 12 37.01451658812739 39.0 37.0 39.0 34.0 39.0 13 36.91452133211044 39.0 37.0 39.0 33.0 39.0 14 38.074346121003195 40.0 37.0 41.0 33.0 41.0 15 38.170641070242574 40.0 37.0 41.0 33.0 41.0 16 38.14042189822575 40.0 37.0 41.0 33.0 41.0 17 38.00181852683513 40.0 37.0 41.0 33.0 41.0 18 37.9087494860685 40.0 36.0 41.0 33.0 41.0 19 37.79760586988836 40.0 36.0 41.0 33.0 41.0 20 37.87705177266833 40.0 36.0 41.0 33.0 41.0 21 37.806706410702425 40.0 36.0 41.0 33.0 41.0 22 37.79707612511464 40.0 36.0 41.0 33.0 41.0 23 37.737175432493125 40.0 36.0 41.0 33.0 41.0 24 37.70146905341725 40.0 36.0 41.0 33.0 41.0 25 37.57420380151175 39.0 35.0 41.0 33.0 41.0 26 37.40030519624276 39.0 35.0 41.0 33.0 41.0 27 37.300594579208706 39.0 35.0 41.0 32.0 41.0 28 37.205430279262465 39.0 35.0 41.0 32.0 41.0 29 37.17631012998513 39.0 35.0 41.0 32.0 41.0 30 37.080481672412155 39.0 35.0 41.0 32.0 41.0 31 36.85530061039248 39.0 35.0 41.0 31.0 41.0 32 36.70431544324615 39.0 35.0 41.0 31.0 41.0 33 36.618409816882256 39.0 35.0 41.0 31.0 41.0 34 36.390864669976914 39.0 35.0 41.0 30.0 41.0 35 36.27202789462032 39.0 35.0 41.0 30.0 41.0 36 36.03000569277966 39.0 35.0 40.0 29.0 41.0 37 35.97102217021411 38.0 35.0 40.0 29.0 41.0 38 35.72952971314716 38.0 35.0 40.0 28.0 41.0 39 35.74388816850628 38.0 35.0 40.0 28.0 41.0 40 35.52792624687688 38.0 35.0 40.0 27.0 41.0 41 35.43943514975173 38.0 34.0 40.0 27.0 41.0 42 35.346587494860685 38.0 34.0 40.0 26.0 41.0 43 35.27081027230463 38.0 34.0 40.0 26.0 41.0 44 35.00702109491129 38.0 34.0 40.0 25.0 41.0 45 34.828378506594134 38.0 34.0 40.0 24.0 41.0 46 34.64549796008729 37.0 34.0 40.0 23.0 41.0 47 34.48305607387963 37.0 33.0 40.0 23.0 41.0 48 34.396217464182925 37.0 33.0 40.0 23.0 41.0 49 34.248900977260504 37.0 33.0 40.0 23.0 41.0 50 34.05724406211455 36.0 33.0 40.0 22.0 41.0 51 31.813822385274676 35.0 29.0 39.0 14.0 40.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 8 3.0 9 13.0 10 11.0 11 8.0 12 3.0 13 9.0 14 5.0 15 12.0 16 21.0 17 26.0 18 60.0 19 85.0 20 198.0 21 307.0 22 417.0 23 637.0 24 897.0 25 1293.0 26 1455.0 27 1778.0 28 2082.0 29 2282.0 30 2825.0 31 3488.0 32 4455.0 33 6089.0 34 9769.0 35 11880.0 36 12210.0 37 18813.0 38 22315.0 39 23027.0 40 3.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 43.62645877478732 19.544419494607673 23.866978715329388 12.962143015275625 2 31.360099939909546 25.454631708782692 25.36607735855024 17.81919099275752 3 31.80287169107182 24.68531579113824 27.39017679243493 16.121635725355006 4 28.12549416490085 24.37142224611784 28.297068218476234 19.206015370505074 5 26.455612131945983 29.136753218001832 25.414307852873275 18.99332679717891 6 26.098232075650717 35.230399443372654 23.85432809386761 14.817040387109017 7 60.63838198551503 28.585660520573075 6.837660900091717 3.9382965938201715 8 82.61409279230843 5.99481324520067 7.457541351718904 3.9335526107720042 9 76.68174199057529 7.365033682279643 9.59233372339416 6.360890603750908 10 43.67073594990354 24.282867895885385 16.54701287200734 15.499383282203738 11 33.48461368164711 24.354027641607896 23.52462127201999 18.636737404725007 12 30.213637369935796 22.3789493658876 28.199816565988804 19.2075966981878 13 23.916790537335146 25.76615326227901 30.698314304690218 19.618741895695628 14 21.006356937284547 27.008286157057466 30.216800025301243 21.768556880356748 15 19.8780796356621 24.380119548372814 35.92064897688098 19.821151839084095 16 23.7444258199184 22.73316676681742 32.30494323033619 21.217464182927987 17 23.443973560201144 22.98776052373573 28.927227300041114 24.641038616022012 18 24.682943799614158 22.983807204528922 29.92504506783896 22.408203928017965 19 24.388816850627787 26.005724406211456 27.213858755811376 22.391599987349377 20 26.942661058224488 25.304405578924065 27.625003953319204 20.127929409532243 21 25.81754641196749 26.096650747967992 27.885132357127045 20.200670482937475 22 24.418071412758152 23.84088680856447 27.617097314905592 24.12394446377178 23 23.49220405452418 25.901356779151776 27.17353489990196 23.43290426642209 24 24.276542585154495 23.79660963344824 28.946993896075146 22.979853885322115 25 22.908694139599607 26.551282456750684 27.02489009772605 23.51513330592365 26 22.18207406938866 26.367848445554888 28.19665391062336 23.253423574433093 27 22.618520509820044 25.691830861191058 28.722445365128564 22.967203263860338 28 20.25127296878459 26.84540940573706 30.83905246845251 22.06426515702584 29 23.242354280654038 25.32733483032354 29.105126664347384 22.325184224675038 30 24.537461652803692 24.562762895727253 29.30516461621177 21.59461083525728 31 26.046048262120873 25.075903728770676 26.603466270280528 22.27458173882792 32 25.850754293304657 25.872892880862775 26.975078275720293 21.30127455011227 33 25.78117587526487 25.05771846041937 26.370220437078974 22.79088522723679 34 23.163287896517918 24.95335083335969 29.901325152598123 21.982036117524274 35 23.840096144723113 25.207153926436636 28.29548689079351 22.657263038046743 36 25.553464688952843 26.758436383187323 27.379898162497234 20.3082007653626 37 24.146083051329896 26.700717922767957 29.009456339542677 20.143742686359467 38 23.0881748315886 26.863594674088365 27.36408488567001 22.684145608653026 39 24.31844776874664 24.909864322084825 28.657610930136947 22.114076979031594 40 25.672064265157026 23.509598659034125 28.236187102691417 22.58214997311743 41 21.405642177171956 24.525601695183276 28.438597046079888 25.63015908156488 42 23.50485467598596 23.837724153199026 28.678958853853697 23.97846231696132 43 24.737499604668077 23.84167747240583 27.912014927733324 23.50880799519276 44 22.70470286852842 25.088554350232457 28.523988740946898 23.682754040292227 45 23.02729371580379 25.236408488567 27.120560422530758 24.615737373098455 46 24.014832853663936 26.008887061576903 27.499288402542778 22.476991682216386 47 21.775672854929 25.96302855877795 29.760586988835826 22.500711597457226 48 23.9523704101964 24.569088206458144 29.282235364812298 22.19630601853316 49 23.90018659666656 23.368069831430468 29.57399032227458 23.15775324962839 50 21.28625193712641 25.247477782346056 29.870489262785032 23.595781017742496 51 22.652519054998578 23.741263164552958 27.768904772446945 25.837313008001516 >>END_MODULE >>Per sequence GC content warn #GC Content Count 0 100.0 1 202.0 2 304.0 3 458.0 4 612.0 5 437.0 6 262.0 7 264.0 8 266.0 9 257.5 10 249.0 11 256.0 12 263.0 13 269.5 14 276.0 15 290.0 16 304.0 17 317.5 18 331.0 19 348.5 20 366.0 21 449.0 22 532.0 23 565.5 24 599.0 25 758.0 26 1033.5 27 1150.0 28 1277.5 29 1405.0 30 1634.0 31 1863.0 32 2170.0 33 2477.0 34 2890.0 35 3303.0 36 3625.0 37 3947.0 38 4175.5 39 4404.0 40 5004.0 41 5604.0 42 6324.0 43 7044.0 44 7847.5 45 8651.0 46 9609.0 47 10567.0 48 10525.0 49 10483.0 50 10388.5 51 10294.0 52 9637.0 53 8980.0 54 8296.0 55 7612.0 56 7093.0 57 6574.0 58 6207.5 59 5841.0 60 5751.0 61 5661.0 62 5232.0 63 4803.0 64 4314.0 65 3825.0 66 3188.5 67 2552.0 68 2014.0 69 1476.0 70 1293.0 71 1110.0 72 853.5 73 597.0 74 492.5 75 295.5 76 203.0 77 169.0 78 135.0 79 106.5 80 78.0 81 55.0 82 32.0 83 25.5 84 19.0 85 13.0 86 7.0 87 6.0 88 5.0 89 4.0 90 3.0 91 1.5 92 0.0 93 1.0 94 2.0 95 1.0 96 0.0 97 0.0 98 0.0 99 0.0 100 0.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 44 0.0 45 0.0 46 0.0 47 0.0 48 0.0 49 0.0 50 0.0 51 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 51 126476.0 >>END_MODULE >>Sequence Duplication Levels fail #Total Deduplicated Percentage 47.86441696448338 #Duplication Level Percentage of deduplicated Percentage of total 1 68.47878157160085 32.77696954362883 2 10.486148966747608 10.038268129921882 3 6.111964583643061 8.776368639109396 4 4.204040504154484 8.048957905057087 5 2.818111237755422 6.744362566811095 6 2.1639658390736245 6.214617793099086 7 1.6304078497447843 5.462696479964578 8 1.153013859292664 4.415066890160979 9 0.8457637477906075 3.6433789809924413 >10 2.0863273700381586 12.465606122900788 >50 0.013215058559228242 0.44435307884499825 >100 0.00825941159951765 0.9693538695088396 >500 0.0 0.0 >1k 0.0 0.0 >5k 0.0 0.0 >10k+ 0.0 0.0 >>END_MODULE >>Overrepresented sequences warn #Sequence Count Percentage Possible Source GAATGATACGGCTGTCTCTTATACACATCTGACGCGGTTGTCTTCGTATGC 328 0.25933773996647586 No Hit GAATGATACCTGTCTCTTATACACATCTGACGCGGTTGTCTTCGTATGCCG 319 0.252221765394225 No Hit GAATCTGTCTCTTATACACATCTGACGCGGTTGTCTTCGTATGCCGTCTTC 215 0.16999272589265949 No Hit CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 209 0.16524874284449223 No Hit GCTGTCTCTTATACACATCTGACGCGGTTGTCTTCGTATGCCGTCTTCTGC 155 0.12255289541098706 No Hit >>END_MODULE >>Adapter Content fail #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.10990227394920775 0.0 2 0.0 0.0 0.0 0.5629526550491792 0.0 3 0.0 0.0 0.0 0.6973655080805845 0.0 4 0.0 0.0 0.0 0.9037287706758594 0.0 5 0.0 0.0 0.0 1.6366741516176981 0.0 6 0.0 0.0 0.0 1.9323824282867896 0.0 7 0.0 0.0 0.0 2.2802745184857205 0.0 8 0.0 0.0 0.0 2.9365255068155225 0.0 9 0.0 0.0 0.0 3.2116765236092224 0.0 10 0.0 0.0 0.0 4.286188684019103 0.0 11 0.0 0.0 0.0 5.302982384009614 0.0 12 0.0 0.0 0.0 6.429678357949334 0.0 13 0.0 0.0 0.0 6.7301306176665925 0.0 14 0.0 0.0 0.0 6.860590151491192 0.0 15 0.0 0.0 0.0 7.12783452987128 0.0 16 0.0 0.0 0.0 7.610930136942978 0.0 17 0.0 0.0 0.0 8.128024289193206 0.0 18 0.0 0.0 0.0 8.690976944242387 0.0 19 0.0 0.0 0.0 9.02779974066226 0.0 20 0.0 0.0 0.0 9.357506562509883 0.0 21 0.0 0.0 0.0 9.763117113128182 0.0 22 0.0 0.0 0.0 10.142635756981562 0.0 23 0.0 0.0 0.0 10.510294443214523 0.0 24 0.0 0.0 0.0 10.84237325658623 0.0 25 0.0 0.0 0.0 11.125430911793542 0.0 26 0.0 0.0 0.0 11.361839400360543 0.0 27 0.0 0.0 0.0 11.659919668553718 0.0 28 0.0 0.0 0.0 11.952465289857365 0.0 29 0.0 0.0 0.0 12.226034978968341 0.0 30 0.0 0.0 0.0 12.600809639773553 0.0 31 0.0 0.0 0.0 12.89968057180809 0.0 32 0.0 0.0 0.0 13.189854201587654 0.0 33 0.0 0.0 0.0 13.478446503684493 0.0 34 0.0 0.0 0.0 13.782852082608558 0.0 35 0.0 0.0 0.0 14.116512223662987 0.0 36 0.0 0.0 0.0 14.43198709636611 0.0 37 0.0 0.0 0.0 14.751415288276037 0.0 38 0.0 0.0 0.0 15.051076884151934 0.0 39 0.0 0.0 0.0 15.438502166418925 0.0 >>END_MODULE >>Kmer Content fail #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position CACGTGA 45 3.783498E-10 45.000004 43 AACACGT 45 3.783498E-10 45.000004 41 TTTAGGC 20 7.0094684E-4 45.0 4 TGCTTAC 20 7.0094684E-4 45.0 12 CAACGAC 20 7.0094684E-4 45.0 12 TATGCGG 25 3.8710758E-5 45.0 2 ATGTACG 20 7.0094684E-4 45.0 1 GTATGCG 20 7.0094684E-4 45.0 1 CGGGCTC 25 3.8710758E-5 45.0 6 AAACCGC 20 7.0094684E-4 45.0 22 CATAATG 20 7.0094684E-4 45.0 19 CGATGGA 25 3.8710758E-5 45.0 10 GCAATCG 20 7.0094684E-4 45.0 21 CAATCGG 20 7.0094684E-4 45.0 22 ACGACGC 20 7.0094684E-4 45.0 14 TAGTAAG 20 7.0094684E-4 45.0 2 CTCGTAA 55 6.002665E-11 40.909092 33 TCGTAAC 55 6.002665E-11 40.909092 34 CATGGTC 50 1.0659278E-9 40.5 12 GACACGA 50 1.0659278E-9 40.5 25 >>END_MODULE