##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR2936577.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 207373 Sequences flagged as poor quality 0 Sequence length 51 %GC 45 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 32.09271698822894 33.0 31.0 34.0 30.0 34.0 2 32.22009615523718 33.0 31.0 34.0 30.0 34.0 3 31.92366894436595 33.0 31.0 34.0 30.0 34.0 4 35.750020494471315 37.0 35.0 37.0 35.0 37.0 5 35.894586084012865 37.0 35.0 37.0 35.0 37.0 6 35.891634880143506 37.0 35.0 37.0 35.0 37.0 7 26.849560936091006 36.0 10.0 37.0 0.0 37.0 8 31.241502027747103 37.0 19.0 37.0 17.0 37.0 9 36.10810954174362 39.0 32.0 39.0 32.0 39.0 10 36.78911430128319 38.0 35.0 39.0 33.0 39.0 11 37.139786761053756 39.0 37.0 39.0 34.0 39.0 12 37.27683931852266 39.0 37.0 39.0 34.0 39.0 13 37.32671080613195 39.0 37.0 39.0 34.0 39.0 14 38.601158299296436 40.0 38.0 41.0 35.0 41.0 15 38.6800692472019 40.0 38.0 41.0 35.0 41.0 16 38.58948368398972 40.0 38.0 41.0 34.0 41.0 17 38.496867962560216 40.0 38.0 41.0 34.0 41.0 18 38.35966109377788 40.0 38.0 41.0 34.0 41.0 19 38.2018874202524 40.0 37.0 41.0 34.0 41.0 20 38.21261205653581 40.0 37.0 41.0 34.0 41.0 21 38.161236033620575 40.0 37.0 41.0 34.0 41.0 22 38.15197253258621 40.0 37.0 41.0 34.0 41.0 23 38.07280118433933 40.0 37.0 41.0 34.0 41.0 24 38.0216952062226 40.0 36.0 41.0 34.0 41.0 25 37.93370400196747 40.0 36.0 41.0 33.0 41.0 26 37.83233593572934 40.0 36.0 41.0 33.0 41.0 27 37.740192792697215 40.0 36.0 41.0 33.0 41.0 28 37.72534997323663 40.0 36.0 41.0 33.0 41.0 29 37.70104594137135 40.0 36.0 41.0 33.0 41.0 30 37.61235551397723 40.0 36.0 41.0 33.0 41.0 31 37.48377078983281 40.0 36.0 41.0 33.0 41.0 32 37.29464780853824 40.0 36.0 41.0 32.0 41.0 33 37.133353908175124 40.0 36.0 41.0 32.0 41.0 34 36.955235252419556 40.0 35.0 41.0 31.0 41.0 35 36.79630424404334 40.0 35.0 41.0 31.0 41.0 36 36.61503185081954 40.0 35.0 41.0 30.0 41.0 37 36.53940001832447 39.0 35.0 41.0 30.0 41.0 38 36.41013535995525 39.0 35.0 41.0 30.0 41.0 39 36.38199283416838 39.0 35.0 41.0 30.0 41.0 40 36.247004190516606 39.0 35.0 41.0 29.0 41.0 41 36.17272258201405 39.0 35.0 41.0 29.0 41.0 42 36.06949795778621 39.0 35.0 41.0 29.0 41.0 43 36.039764096579596 39.0 35.0 41.0 28.0 41.0 44 35.856355456110485 39.0 35.0 41.0 27.0 41.0 45 35.751023518008616 39.0 35.0 40.0 27.0 41.0 46 35.64602913590487 39.0 35.0 40.0 27.0 41.0 47 35.552559880022955 39.0 35.0 40.0 26.0 41.0 48 35.476826780728445 38.0 35.0 40.0 26.0 41.0 49 35.367617770876635 38.0 35.0 40.0 26.0 41.0 50 35.18747377913229 38.0 34.0 40.0 25.0 41.0 51 33.32764631846962 36.0 32.0 40.0 20.0 41.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 8 9.0 9 14.0 10 18.0 11 14.0 12 5.0 13 7.0 14 10.0 15 17.0 16 19.0 17 40.0 18 81.0 19 135.0 20 210.0 21 339.0 22 528.0 23 851.0 24 1365.0 25 1980.0 26 2538.0 27 2754.0 28 2888.0 29 3083.0 30 3586.0 31 4371.0 32 5460.0 33 7893.0 34 12271.0 35 15910.0 36 18291.0 37 31140.0 38 41914.0 39 49629.0 40 3.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 40.97736928143972 19.643347976834015 24.155989448963943 15.223293292762316 2 34.24457378733008 23.332352813529244 26.04244525565045 16.380628143490235 3 31.37390113467038 22.96104121558737 29.777261263520323 15.887796386221927 4 27.707078549280766 25.224113071614916 28.91649346829144 18.152314910812883 5 24.717296851566985 29.760865686468346 27.22823125479209 18.293606207172584 6 26.050160821321967 34.48761410598294 26.558423709933308 12.903801362761785 7 61.1704513123695 27.908165479594736 7.696758980195108 3.2246242278406543 8 83.96753675743707 4.421501352635107 8.842520482415743 2.768441407512068 9 77.92673105949184 7.193800542982934 10.646516180987883 4.232952216537351 10 38.07052991469478 30.23103296957656 18.44598862918509 13.252448486543573 11 27.953494427914915 26.58832152691045 28.385083882665533 17.073100162509103 12 25.13297295212009 25.507177887188785 30.441764356979935 18.91808480371119 13 22.71510755980769 26.330814522623484 31.745694955466718 19.208382962102107 14 20.261075453410037 28.143490232576085 31.05418738215679 20.54124693185709 15 20.51520689771571 27.170364512255695 33.90557112063769 18.408857469390906 16 24.230251768552318 26.330814522623484 31.535928013772285 17.90300569505191 17 24.390349756236347 25.67209810341751 30.073346096164883 19.864206044181255 18 24.445805384500392 25.15515520342571 31.03489846797799 19.364140944095904 19 24.167080574616755 26.943719770654813 29.626325510071222 19.262874144657214 20 24.76600135986845 26.73105949183356 29.814392423314512 18.688546724983485 21 24.251469574149 26.888264142390767 30.482753299609882 18.377512983850355 22 24.159365008945233 24.92995713038824 29.80571241193405 21.104965448732475 23 21.922333187059067 27.1414311409875 30.88155160025654 20.054684071696894 24 21.181156659738733 25.707782594648293 32.66963394463117 20.441426800981805 25 21.395263607123397 28.253919266249707 30.23633742097573 20.11447970565117 26 21.396228052832335 27.858978748438805 29.963399285345734 20.78139391338313 27 20.849869558717867 27.500204944713154 31.24611207823584 20.403813418333147 28 20.321835533073255 27.35987809406239 31.85130176059564 20.466984612268714 29 20.91979187261601 26.430634653498768 31.866250669084213 20.78332280480101 30 21.34029020171382 26.34383453969417 31.747623846884597 20.568251411707404 31 22.413718275763962 27.166506729419932 30.308188626291756 20.11158636852435 32 22.47206724115483 27.11973111253635 30.476002179647306 19.932199466661523 33 22.04964002063914 26.959633124852317 30.242124095229368 20.748602759279173 34 21.442521446861456 27.03775322727645 31.181494215736862 20.338231110125232 35 20.83395620452036 26.959150901997848 31.35364777478264 20.853245118699157 36 22.01250886084495 27.945778862243397 29.718912298129457 20.322799978782193 37 21.63492836579497 27.80834534871946 30.05405718198608 20.50266910349949 38 21.06252983753912 28.364830522777794 29.40884300270527 21.163796636977814 39 21.970555472506064 27.452947104975095 29.231384992260324 21.34511243025852 40 21.617568343034048 26.737328388941666 30.665515761454 20.979587506570287 41 20.988749740805215 27.22630236337421 29.96966818245384 21.815279713366735 42 21.33498575031465 27.312138031469864 29.603661035911138 21.749215182304347 43 21.83697974181788 27.386882573912708 29.216918306626223 21.559219377643185 44 21.49701262941656 27.74854971476518 29.12288485000458 21.631552805813676 45 21.79165079349771 27.36807588258838 29.02210027342036 21.818173050493556 46 21.161385522705466 27.75915861756352 29.438258596827936 21.641197262903077 47 20.972836386607707 27.829563154316133 30.245017432356192 20.952583026719967 48 21.118949911512104 27.03582433585857 30.372806488790733 21.472419263838592 49 21.7612707536661 26.592179309746207 30.243088540938306 21.403461395649384 50 20.304957733166805 27.76301640039928 29.79317461771783 22.138851248716083 51 20.314602190256206 26.64715271515578 29.770992366412212 23.267252728175798 >>END_MODULE >>Per sequence GC content warn #GC Content Count 0 65.0 1 219.0 2 373.0 3 1690.5 4 3008.0 5 2152.5 6 1297.0 7 1075.0 8 853.0 9 895.5 10 938.0 11 839.0 12 740.0 13 744.5 14 749.0 15 738.0 16 727.0 17 758.0 18 789.0 19 788.5 20 788.0 21 850.5 22 913.0 23 1069.5 24 1226.0 25 1485.5 26 2042.5 27 2340.0 28 2792.0 29 3244.0 30 3886.0 31 4528.0 32 5398.0 33 6268.0 34 6975.0 35 7682.0 36 8267.0 37 8852.0 38 9548.5 39 10245.0 40 11234.5 41 12224.0 42 12687.5 43 13151.0 44 13786.0 45 14421.0 46 15328.5 47 16236.0 48 16428.0 49 16620.0 50 16155.5 51 15691.0 52 14546.5 53 13402.0 54 12395.0 55 11388.0 56 10385.5 57 9383.0 58 8556.5 59 7730.0 60 7017.0 61 6304.0 62 5493.5 63 4683.0 64 3883.0 65 3083.0 66 2564.0 67 2045.0 68 1688.0 69 1331.0 70 1092.0 71 853.0 72 729.5 73 606.0 74 483.0 75 279.5 76 199.0 77 165.0 78 131.0 79 105.0 80 79.0 81 57.5 82 36.0 83 27.5 84 19.0 85 14.5 86 10.0 87 8.0 88 6.0 89 4.5 90 3.0 91 2.5 92 2.0 93 3.5 94 5.0 95 3.0 96 1.0 97 1.0 98 1.0 99 0.5 100 0.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 44 0.0 45 0.0 46 0.0 47 0.0 48 0.0 49 0.0 50 0.0 51 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 51 207373.0 >>END_MODULE >>Sequence Duplication Levels fail #Total Deduplicated Percentage 48.81063853272536 #Duplication Level Percentage of deduplicated Percentage of total 1 66.78574717772617 32.598549646299745 2 11.856955114639282 11.574911003988143 3 6.7753434276053515 9.92126516939764 4 4.4769922945842975 8.740994104190035 5 2.964989007771344 7.236150335591556 6 2.1539918522927266 6.30826306228175 7 1.4969943331878364 5.11484744979388 8 1.075995926744213 4.2016038594397305 9 0.7629971116194003 3.351813859509125 >10 1.641993784113835 9.84848525459514 >50 0.0039999848577681645 0.11812129809248254 >100 0.0029999886433261236 0.29091030439305615 >500 0.0 0.0 >1k 9.999962144420411E-4 0.6940846524277279 >5k 0.0 0.0 >10k+ 0.0 0.0 >>END_MODULE >>Overrepresented sequences warn #Sequence Count Percentage Possible Source CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 1422 0.68572089905629 No Hit CGTTTTATTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 243 0.11718015363620143 No Hit >>END_MODULE >>Adapter Content warn #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.03472004552183746 0.0 2 0.0 0.0 0.0 0.1490068620312191 0.0 3 0.0 0.0 0.0 0.23484253012687284 0.0 4 0.0 0.0 0.0 0.33562710671109547 0.0 5 0.0 0.0 0.0 0.6317119393556538 0.0 6 0.0 0.0 0.0 0.8916300579149649 0.0 7 0.0 0.0 0.0 1.0985036624825797 0.0 8 0.0 0.0 0.0 1.4992308545471205 0.0 9 0.0 0.0 0.0 1.7027288991334455 0.0 10 0.0 0.0 0.0 2.1261205653580744 0.0 11 0.0 0.0 0.0 2.5620500257989227 0.0 12 0.0 0.0 0.0 2.9208238295245765 0.0 13 0.0 0.0 0.0 3.089601828589064 0.0 14 0.0 0.0 0.0 3.1706152681400184 0.0 15 0.0 0.0 0.0 3.28393763894046 0.0 16 0.0 0.0 0.0 3.527942403302262 0.0 17 0.0 0.0 0.0 3.8327072473272796 0.0 18 0.0 0.0 0.0 4.155314336967686 0.0 19 0.0 0.0 0.0 4.37520795860599 0.0 20 0.0 0.0 0.0 4.581599340319135 0.0 21 0.0 0.0 0.0 4.826568550389877 0.0 22 0.0 0.0 0.0 5.0797355489866085 0.0 23 0.0 0.0 0.0 5.373891490213287 0.0 24 0.0 0.0 0.0 5.622718483119789 0.0 25 0.0 0.0 0.0 5.841647659049153 0.0 26 0.0 0.0 0.0 6.0297145722924395 0.0 27 0.0 0.0 0.0 6.231283725460885 0.0 28 0.0 0.0 0.0 6.451177347099188 0.0 29 0.0 0.0 0.0 6.663355403065973 0.0 30 0.0 0.0 0.0 6.954135784311362 0.0 31 0.0 0.0 0.0 7.213571680016202 0.0 32 0.0 0.0 0.0 7.448896432997546 0.0 33 0.0 0.0 0.0 7.715083448664966 0.0 34 0.0 0.0 0.0 7.960052658735708 0.0 35 0.0 0.0 0.0 8.237330800055938 0.0 36 0.0 0.0 0.0 8.476995558727511 0.0 37 0.0 0.0 0.0 8.721482545943783 0.0 38 0.0 0.0 0.0 8.969345093141344 0.0 39 0.0 0.0 0.0 9.254821022987564 0.0 >>END_MODULE >>Kmer Content fail #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position CCGGGTG 35 1.2054988E-7 45.000004 5 TTAATCG 35 1.2054988E-7 45.000004 20 CATGCGG 20 7.019902E-4 45.000004 2 TATGCGG 20 7.019902E-4 45.000004 2 CGGGAGT 20 7.019902E-4 45.000004 6 CGTAAAG 20 7.019902E-4 45.000004 2 ATACCGG 20 7.019902E-4 45.000004 2 TAATCGT 35 1.2054988E-7 45.000004 21 CGTTTTT 680 0.0 43.345592 1 CGTTTTA 105 0.0 42.857143 1 GCGATGC 45 1.915214E-8 40.0 9 CGTTGAT 40 3.4399636E-7 39.375004 25 ATCGTTG 40 3.4399636E-7 39.375004 23 GCCTATG 40 3.4399636E-7 39.375004 9 CTGGGCG 35 6.2235504E-6 38.57143 5 CGGTAGT 35 6.2235504E-6 38.57143 12 AGTGCGG 30 1.1366976E-4 37.500004 2 CGAGGCA 30 1.1366976E-4 37.500004 5 CAGCTCG 30 1.1366976E-4 37.500004 25 CGATAGC 30 1.1366976E-4 37.500004 10 >>END_MODULE