SRR2936575.fastq FastQC Report

Basic Statistics

Measure	Value
Filename	SRR2936575.fastq
File type	Conventional base calls
Encoding	Sanger / Illumina 1.9
Total Sequences	152818
Sequences flagged as poor quality	0
Sequence length	51
%GC	48

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	205	0.1341465010666283	No Hit
GATACTGAAGCTACGAATATACTGACTATGAAGACCTATGCTTTGATTCAT	161	0.10535408132549831	No Hit

Adapter graph

Kmer graph

Sequence	Count	PValue	Obs/Exp Max	Max Obs/Exp Position
CGAGGGA	70	0.0	45.000004	4
CGAATAT	35	1.2026976E-7	45.000004	14
GCTACGA	35	1.2026976E-7	45.000004	10
TTGGGAC	35	1.2026976E-7	45.000004	5
ATGGGCG	20	7.0140796E-4	45.0	5
GGATGTC	20	7.0140796E-4	45.0	8
GCAACGG	20	7.0140796E-4	45.0	2
TACGGGA	20	7.0140796E-4	45.0	4
TAACGGG	20	7.0140796E-4	45.0	3
ACGGGTG	20	7.0140796E-4	45.0	5
CGAATGG	20	7.0140796E-4	45.0	2
CATACGA	20	7.0140796E-4	45.0	18
CGTGTAT	20	7.0140796E-4	45.0	30
GCATGTT	20	7.0140796E-4	45.0	18
ACATACG	20	7.0140796E-4	45.0	17
GTAGTAG	20	7.0140796E-4	45.0	1
ACGAAAA	20	7.0140796E-4	45.0	21
AGGCGAT	30	2.1531214E-6	44.999996	7
ATAGGAT	45	1.909575E-8	40.0	5
CCTCGTC	45	1.909575E-8	40.0	36