##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR2936575.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 152818 Sequences flagged as poor quality 0 Sequence length 51 %GC 48 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 32.095289821879625 33.0 31.0 34.0 30.0 34.0 2 32.22641966260519 33.0 31.0 34.0 30.0 34.0 3 32.14620659869911 33.0 31.0 34.0 30.0 34.0 4 35.85866193772985 37.0 35.0 37.0 35.0 37.0 5 35.91101833553639 37.0 35.0 37.0 35.0 37.0 6 35.89253229331623 37.0 35.0 37.0 35.0 37.0 7 26.855514402753602 36.0 10.0 37.0 0.0 37.0 8 31.200656990668637 36.0 19.0 37.0 17.0 37.0 9 36.010803701134684 39.0 32.0 39.0 32.0 39.0 10 36.76173618291039 38.0 35.0 39.0 33.0 39.0 11 37.11628211336361 39.0 37.0 39.0 34.0 39.0 12 37.132595636639664 39.0 37.0 39.0 34.0 39.0 13 37.06480911934458 39.0 37.0 39.0 33.0 39.0 14 38.25411927914251 40.0 37.0 41.0 34.0 41.0 15 38.3607624756246 40.0 37.0 41.0 34.0 41.0 16 38.30324961719169 40.0 37.0 41.0 34.0 41.0 17 38.19849101545629 40.0 37.0 41.0 34.0 41.0 18 38.112709235823004 40.0 37.0 41.0 33.0 41.0 19 38.01524035126752 40.0 37.0 41.0 34.0 41.0 20 38.04650630161368 40.0 37.0 41.0 34.0 41.0 21 37.99580546794226 40.0 36.0 41.0 34.0 41.0 22 38.000346817783246 40.0 36.0 41.0 34.0 41.0 23 37.954311664856235 40.0 36.0 41.0 34.0 41.0 24 37.90408852360324 40.0 36.0 41.0 33.0 41.0 25 37.820819536965544 40.0 36.0 41.0 33.0 41.0 26 37.663331544713316 40.0 36.0 41.0 33.0 41.0 27 37.5616026907825 40.0 36.0 41.0 33.0 41.0 28 37.524552081561076 40.0 36.0 41.0 33.0 41.0 29 37.49699642712246 40.0 36.0 41.0 33.0 41.0 30 37.4147024565169 40.0 36.0 41.0 33.0 41.0 31 37.296195474355116 40.0 35.0 41.0 32.0 41.0 32 37.166498710884845 39.0 35.0 41.0 32.0 41.0 33 37.05389417476999 39.0 35.0 41.0 31.0 41.0 34 36.93650617073905 39.0 35.0 41.0 31.0 41.0 35 36.85126097711002 39.0 35.0 41.0 31.0 41.0 36 36.711800965854806 39.0 35.0 41.0 31.0 41.0 37 36.68090146448717 39.0 35.0 41.0 31.0 41.0 38 36.565954272402465 39.0 35.0 41.0 30.0 41.0 39 36.52114934104621 39.0 35.0 41.0 30.0 41.0 40 36.33690402963002 39.0 35.0 41.0 30.0 41.0 41 36.25542802549438 39.0 35.0 40.0 30.0 41.0 42 36.19820309125888 39.0 35.0 40.0 30.0 41.0 43 36.16604064966169 39.0 35.0 40.0 30.0 41.0 44 35.96921174207227 38.0 35.0 40.0 29.0 41.0 45 35.851064665157246 38.0 35.0 40.0 29.0 41.0 46 35.735214438089756 38.0 35.0 40.0 28.0 41.0 47 35.647482626392176 38.0 35.0 40.0 28.0 41.0 48 35.56841471554398 38.0 35.0 40.0 28.0 41.0 49 35.41597848420997 38.0 34.0 40.0 27.0 41.0 50 35.194309570862075 38.0 34.0 40.0 27.0 41.0 51 33.12628093549189 36.0 31.0 39.0 20.0 40.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 7 1.0 8 6.0 9 13.0 10 15.0 11 12.0 12 4.0 13 5.0 14 10.0 15 7.0 16 22.0 17 36.0 18 70.0 19 96.0 20 165.0 21 250.0 22 404.0 23 560.0 24 808.0 25 1052.0 26 1322.0 27 1665.0 28 1935.0 29 2228.0 30 2735.0 31 3525.0 32 4681.0 33 6711.0 34 11070.0 35 13677.0 36 13875.0 37 22657.0 38 29804.0 39 33394.0 40 3.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 42.64615424884503 20.41513434281302 24.87468753680849 12.064023871533458 2 32.100276145480244 24.989202842597077 25.36677616511144 17.54374484681124 3 33.727047860854086 23.691580834718422 25.892892198562993 16.68847910586449 4 29.325079506340877 26.672905024277245 25.47278461961287 18.529230849769007 5 26.36927587064351 31.05066157128087 23.36439424675104 19.21566831132458 6 27.816749335811224 35.73728225732571 22.88342996243898 13.562538444424085 7 61.695611773482185 28.344828488790586 5.744742111531364 4.214817626195868 8 82.76839115810965 6.429870826735071 7.181745605884124 3.619992409271159 9 75.97992383096232 9.43148058474787 9.106911489484224 5.481684094805585 10 43.58190789043175 26.697116831786833 16.266408407386564 13.45456687039485 11 34.52603750867044 26.6984255781387 22.174089439725687 16.601447473465168 12 33.08249028255833 23.003834626810978 25.658626601578348 18.255048489052335 13 25.99628316036069 26.37320210969912 26.491643654543314 21.138871075396878 14 21.06819877239592 28.725673677184627 28.414846418615607 21.791281131803846 15 21.409781570233875 26.271119894253296 32.84298970016621 19.476108835346622 16 24.406156342839193 24.946014212985382 31.85161433862503 18.79621510555039 17 24.208535643706895 24.867489431873206 27.682602834744596 23.2413720896753 18 25.039589577144056 26.646075724063916 27.943697731942574 20.370636966849453 19 27.72840895706003 27.123768142496303 25.21038097606303 19.937441924380636 20 29.228886649478465 25.603659254799826 26.04797864125954 19.11947545446217 21 26.893428784567263 26.73114423693544 26.369930243819447 20.005496734677852 22 24.723527333167556 26.219424413354446 26.356188407124815 22.70085984635318 23 25.541493803086023 26.382363334162207 27.34232878325852 20.733814079493254 24 24.502349199701605 24.673140598620584 28.326506039864412 22.498004161813398 25 23.731497598450442 25.63114292818909 26.952322370401394 23.685037102959075 26 22.285987252810532 29.011634755068123 26.81752149615883 21.884856495962516 27 22.844821945058825 28.465233153162583 27.10282820086639 21.587116700912194 28 21.789972385451975 28.76820793362039 28.81532280228769 20.626496878639948 29 23.648392205106727 27.117224410736956 27.854702980015446 21.379680404140874 30 23.546309989660905 26.94512426546611 27.70746901543012 21.801096729442868 31 24.82626392178932 27.248099045923908 25.70246960436598 22.223167427920796 32 26.587182138229792 27.11591566438509 26.051250507139212 20.245651690245914 33 24.792890889816643 28.556191024617515 25.5166276224005 21.134290463165335 34 23.248570194610583 28.030729364341894 27.005326597652108 21.71537384339541 35 23.054221361357953 27.696344671439228 27.069455168893718 22.1799787983091 36 23.385988561556882 30.332814197280427 25.27974453271212 21.001452708450575 37 24.090748472038634 29.754348309754086 25.341255611249984 20.813647606957293 38 22.97962281930139 29.867554869190805 25.00752529152325 22.145297019984554 39 24.35315211558848 26.99681974636496 26.515201088876967 22.1348270491696 40 24.26284861730948 26.75077543221348 27.475166537973276 21.511209412503764 41 20.652017432501406 28.382782132994805 27.56874190213195 23.39645853237184 42 22.60139512361109 27.605386799984295 26.219424413354446 23.573793663050164 43 23.394495412844037 26.316271643392795 26.52174482063631 23.767488123126856 44 22.52156159614705 28.067374262194246 26.158567707992514 23.25249643366619 45 22.084440314622622 27.821984321218707 25.979269457786387 24.114305906372284 46 21.930662618277953 29.600570613409417 25.820911149210175 22.64785561910246 47 22.634768155583767 27.907052834090223 27.16761114528393 22.290567865042078 48 22.575874569749637 26.288787970003536 28.251253124631916 22.884084335614915 49 22.06350037299271 26.78283971783429 27.814786216283423 23.33887369288958 50 19.99437239068696 27.746731405986207 27.75523825727336 24.503657946053476 51 19.927626326741617 27.2291222238218 27.302412019526496 25.54083942991009 >>END_MODULE >>Per sequence GC content pass #GC Content Count 0 88.0 1 218.0 2 348.0 3 471.0 4 594.0 5 448.5 6 303.0 7 276.5 8 250.0 9 267.5 10 285.0 11 287.5 12 290.0 13 299.5 14 309.0 15 326.0 16 343.0 17 368.5 18 394.0 19 386.0 20 378.0 21 406.5 22 435.0 23 539.5 24 644.0 25 877.0 26 1321.0 27 1532.0 28 1778.0 29 2024.0 30 2475.5 31 2927.0 32 3388.0 33 3849.0 34 4249.5 35 4650.0 36 4876.5 37 5103.0 38 5843.5 39 6584.0 40 7131.0 41 7678.0 42 8576.0 43 9474.0 44 9959.0 45 10444.0 46 11062.0 47 11680.0 48 11644.0 49 11608.0 50 11338.5 51 11069.0 52 10232.5 53 9396.0 54 8965.5 55 8535.0 56 8315.5 57 8096.0 58 8146.5 59 8197.0 60 7916.5 61 7636.0 62 6883.0 63 6130.0 64 5059.0 65 3988.0 66 3203.0 67 2418.0 68 2052.5 69 1687.0 70 1331.5 71 976.0 72 756.0 73 536.0 74 438.5 75 275.0 76 209.0 77 166.0 78 123.0 79 89.0 80 55.0 81 46.0 82 37.0 83 29.5 84 22.0 85 21.5 86 21.0 87 16.5 88 12.0 89 9.0 90 6.0 91 3.5 92 1.0 93 1.0 94 1.0 95 1.5 96 2.0 97 1.0 98 0.0 99 0.0 100 0.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 44 0.0 45 0.0 46 0.0 47 0.0 48 0.0 49 0.0 50 0.0 51 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 51 152818.0 >>END_MODULE >>Sequence Duplication Levels fail #Total Deduplicated Percentage 42.869949875014726 #Duplication Level Percentage of deduplicated Percentage of total 1 66.05253919069499 28.31669044222539 2 10.518523041228459 9.018571110733028 3 6.0125471280509215 7.732727820021202 4 4.298383526933586 7.370859453729272 5 2.976508479233129 6.380138465364029 6 2.223986079098805 5.720530304021778 7 1.7797994291209378 5.3409938619796105 8 1.4439882160792514 4.952296195474355 9 1.1203883198754447 4.322789200225104 >10 3.5458611267992617 19.77384863039694 >50 0.01831697525681926 0.5084479577013179 >100 0.00915848762840963 0.5621065581279693 >500 0.0 0.0 >1k 0.0 0.0 >5k 0.0 0.0 >10k+ 0.0 0.0 >>END_MODULE >>Overrepresented sequences warn #Sequence Count Percentage Possible Source CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 205 0.1341465010666283 No Hit GATACTGAAGCTACGAATATACTGACTATGAAGACCTATGCTTTGATTCAT 161 0.10535408132549831 No Hit >>END_MODULE >>Adapter Content fail #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.047769241843238365 0.0 2 0.0 0.0 0.0 0.2617492703739088 0.0 3 0.0 0.0 0.0 0.34878090277323354 0.0 4 0.0 0.0 0.0 0.45151749139499275 0.0 5 0.0 0.0 0.0 0.8336714261408996 0.0 6 0.0 0.0 0.0 1.0731720085330263 0.0 7 0.0 0.0 0.0 1.2982763810545879 0.0 8 0.0 0.0 0.0 1.75110261880145 0.0 9 0.0 0.0 0.0 1.9533039301652946 0.0 10 0.0 0.0 0.0 2.408747660615896 0.0 11 0.0 0.0 0.0 2.955149262521431 0.0 12 0.0 0.0 0.0 3.396851156277402 0.0 13 0.0 0.0 0.0 3.5761494064835295 0.0 14 0.0 0.0 0.0 3.6566373071235065 0.0 15 0.0 0.0 0.0 3.8248112133387426 0.0 16 0.0 0.0 0.0 4.178827101519454 0.0 17 0.0 0.0 0.0 4.572759753432187 0.0 18 6.54373175934772E-4 0.0 0.0 5.015770393540028 0.0 19 6.54373175934772E-4 0.0 0.0 5.281445902969545 0.0 20 6.54373175934772E-4 0.0 0.0 5.532725202528498 0.0 21 6.54373175934772E-4 0.0 0.0 5.883469224829536 0.0 22 6.54373175934772E-4 0.0 0.0 6.194950856574487 0.0 23 6.54373175934772E-4 0.0 0.0 6.547003625227394 0.0 24 6.54373175934772E-4 0.0 0.0 6.8022091638419555 0.0 25 6.54373175934772E-4 0.0 0.0 7.050216597521234 0.0 26 6.54373175934772E-4 0.0 0.0 7.272049104163123 0.0 27 6.54373175934772E-4 0.0 0.0 7.497153476684684 0.0 28 6.54373175934772E-4 0.0 0.0 7.738617178604614 0.0 29 6.54373175934772E-4 0.0 0.0 7.989896478163567 0.0 30 6.54373175934772E-4 0.0 0.0 8.285673153686083 0.0 31 6.54373175934772E-4 0.0 0.0 8.606316009894122 0.0 32 6.54373175934772E-4 0.0 0.0 8.876572131555184 0.0 33 6.54373175934772E-4 0.0 0.0 9.174311926605505 0.0 34 6.54373175934772E-4 0.0 0.0 9.460273004489 0.0 35 6.54373175934772E-4 0.0 0.0 9.763247784946799 0.0 36 6.54373175934772E-4 0.0 0.0 10.061641953173055 0.0 37 6.54373175934772E-4 0.0 0.0 10.364616733630855 0.0 38 6.54373175934772E-4 0.0 0.0 10.653849677394025 0.0 39 6.54373175934772E-4 0.0 0.0 10.975146906777997 0.0 >>END_MODULE >>Kmer Content fail #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position CGAGGGA 70 0.0 45.000004 4 CGAATAT 35 1.2026976E-7 45.000004 14 GCTACGA 35 1.2026976E-7 45.000004 10 TTGGGAC 35 1.2026976E-7 45.000004 5 ATGGGCG 20 7.0140796E-4 45.0 5 GGATGTC 20 7.0140796E-4 45.0 8 GCAACGG 20 7.0140796E-4 45.0 2 TACGGGA 20 7.0140796E-4 45.0 4 TAACGGG 20 7.0140796E-4 45.0 3 ACGGGTG 20 7.0140796E-4 45.0 5 CGAATGG 20 7.0140796E-4 45.0 2 CATACGA 20 7.0140796E-4 45.0 18 CGTGTAT 20 7.0140796E-4 45.0 30 GCATGTT 20 7.0140796E-4 45.0 18 ACATACG 20 7.0140796E-4 45.0 17 GTAGTAG 20 7.0140796E-4 45.0 1 ACGAAAA 20 7.0140796E-4 45.0 21 AGGCGAT 30 2.1531214E-6 44.999996 7 ATAGGAT 45 1.909575E-8 40.0 5 CCTCGTC 45 1.909575E-8 40.0 36 >>END_MODULE