##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR2936574.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 217374 Sequences flagged as poor quality 0 Sequence length 51 %GC 47 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 31.983208663409606 33.0 31.0 34.0 30.0 34.0 2 32.1092908995556 33.0 31.0 34.0 30.0 34.0 3 31.994474960206833 33.0 31.0 34.0 30.0 34.0 4 35.74456466734752 37.0 35.0 37.0 35.0 37.0 5 35.81056152069705 37.0 35.0 37.0 35.0 37.0 6 35.79882598654853 37.0 35.0 37.0 35.0 37.0 7 26.825222887741866 35.0 10.0 37.0 0.0 37.0 8 31.167917966270114 35.0 19.0 37.0 17.0 37.0 9 35.919999631970704 39.0 32.0 39.0 32.0 39.0 10 36.614112083321835 38.0 35.0 39.0 32.0 39.0 11 36.97205737576711 39.0 37.0 39.0 34.0 39.0 12 37.024745369731434 39.0 37.0 39.0 33.0 39.0 13 36.99389071370081 39.0 37.0 39.0 33.0 39.0 14 38.08200152732157 40.0 37.0 41.0 33.0 41.0 15 38.198491999963196 40.0 37.0 41.0 33.0 41.0 16 38.14901966196509 40.0 37.0 41.0 33.0 41.0 17 38.078201624849335 40.0 37.0 41.0 33.0 41.0 18 37.98096828507549 40.0 37.0 41.0 33.0 41.0 19 37.89060329202204 40.0 37.0 41.0 33.0 41.0 20 37.93116932107796 40.0 37.0 41.0 33.0 41.0 21 37.84170599979758 40.0 36.0 41.0 33.0 41.0 22 37.85407178411401 40.0 36.0 41.0 33.0 41.0 23 37.81518488871714 40.0 36.0 41.0 33.0 41.0 24 37.79220605960234 40.0 36.0 41.0 33.0 41.0 25 37.654678112377745 40.0 36.0 41.0 33.0 41.0 26 37.53469596179856 39.0 36.0 41.0 33.0 41.0 27 37.40527846016543 39.0 36.0 41.0 32.0 41.0 28 37.325236688840434 39.0 36.0 41.0 32.0 41.0 29 37.29952524220928 39.0 36.0 41.0 32.0 41.0 30 37.17765694149254 39.0 35.0 41.0 32.0 41.0 31 37.06563342442058 39.0 35.0 41.0 31.0 41.0 32 36.937573030813255 39.0 35.0 41.0 31.0 41.0 33 36.84119995951678 39.0 35.0 41.0 31.0 41.0 34 36.687736343812965 39.0 35.0 41.0 30.0 41.0 35 36.59641447459218 39.0 35.0 41.0 30.0 41.0 36 36.44632292730501 39.0 35.0 41.0 30.0 41.0 37 36.36140016745333 39.0 35.0 41.0 30.0 41.0 38 36.21035174399882 39.0 35.0 41.0 29.0 41.0 39 36.13256415210651 39.0 35.0 41.0 29.0 41.0 40 35.948710517357185 39.0 35.0 40.0 28.0 41.0 41 35.846522583197626 39.0 35.0 40.0 28.0 41.0 42 35.76189424678204 38.0 35.0 40.0 28.0 41.0 43 35.7223586997525 38.0 35.0 40.0 28.0 41.0 44 35.53568964089541 38.0 35.0 40.0 27.0 41.0 45 35.429881218545 38.0 34.0 40.0 27.0 41.0 46 35.319334419019754 38.0 34.0 40.0 26.0 41.0 47 35.22303035321612 38.0 34.0 40.0 26.0 41.0 48 35.11143927056594 38.0 34.0 40.0 26.0 41.0 49 34.922483829712846 38.0 34.0 40.0 24.0 41.0 50 34.68589619733731 37.0 34.0 40.0 24.0 41.0 51 32.556211874465205 35.0 30.0 39.0 18.0 40.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 7 1.0 8 5.0 9 14.0 10 17.0 11 16.0 12 14.0 13 9.0 14 5.0 15 21.0 16 25.0 17 63.0 18 86.0 19 197.0 20 306.0 21 523.0 22 732.0 23 1078.0 24 1421.0 25 1889.0 26 2367.0 27 2799.0 28 3213.0 29 3563.0 30 4263.0 31 5603.0 32 7096.0 33 9762.0 34 15312.0 35 18614.0 36 20624.0 37 32391.0 38 40736.0 39 44601.0 40 8.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 42.916356141948896 20.74857158629827 24.048874290393517 12.286197981359317 2 31.424641401455556 24.0576149861529 26.298453356887208 18.21929025550434 3 31.96886472163184 24.66670346959618 26.746989060329202 16.617442748442777 4 28.01853027500989 26.13882065012375 26.243708999236336 19.59894007563002 5 25.507650408972555 29.538951300523518 25.310294699458076 19.643103591045847 6 26.6756833843974 34.47928455105026 24.62898046684516 14.216051597707176 7 61.96785264107023 27.902601047043348 5.998417474030933 4.131128837855493 8 83.06191172817357 5.079724346057946 7.550581026249689 4.307782899518801 9 76.52387130015549 7.7930203244178236 9.91240902775861 5.770699347668074 10 41.46632071912924 26.43094390313469 17.399505000598047 14.703230377138022 11 31.04787141056428 26.28649240479542 24.266471611140247 18.39916457350005 12 27.819794455638668 23.623340417897264 29.030610836622593 19.52625428984147 13 25.15250213917028 25.263370964328765 30.19220329938263 19.39192359711833 14 20.799635650997818 27.75170903603927 30.771389402596444 20.677265910366465 15 20.47346968818718 25.85129776330196 33.76576775511331 19.909464793397554 16 24.182744946497742 25.65532216364423 29.688923238289767 20.473009651568262 17 24.797813905986917 24.64508174850718 27.477987247784924 23.079117097720978 18 25.382980485246627 24.495109810740935 29.698584007286982 20.42332569672546 19 25.290973161463654 26.650381370357078 27.115938428698925 20.942707039480343 20 26.115818819178006 26.522951226917662 26.947565026176086 20.41366492772825 21 25.183324592637575 26.712026277291674 28.735727363898167 19.368921766172587 22 24.276132380137458 24.730648559625344 27.84647657953573 23.146742480701462 23 22.881301351587584 26.505929872017813 28.16528195644373 22.447486819950868 24 23.290733942421816 25.47314766255394 29.287771306596007 21.94834708842824 25 22.677045092789385 26.54825324095798 27.809213613403628 22.965488052849008 26 21.11844102790582 27.786671819076798 27.20932586233864 23.88556129067874 27 21.65530376217947 26.14434108955073 29.879378398520522 22.32097674974928 28 21.34523908103085 26.43002382989686 28.98920754092026 23.235529548152034 29 21.59963933129077 26.07901588966482 28.541131874097182 23.780212904947234 30 22.123161003615888 26.00633010387627 29.357696872671063 22.51281201983678 31 23.346858409929432 25.779992087370157 27.95504522159964 22.918104281100778 32 23.91408356105146 26.004029920781697 27.120078758269155 22.961807759897688 33 23.29395419875422 25.59183711023397 28.290871953407493 22.823336737604315 34 21.014932788649975 25.387580851435775 30.096515682648338 23.50097067726591 35 21.354439813409147 25.682464324160204 29.695363750954577 23.26773211147607 36 24.21770772953527 25.678784031208885 28.28903180693183 21.81447643232401 37 21.822297054845567 26.637500345027465 28.48270722349499 23.05749537663198 38 22.08865825719727 26.842216640444576 28.36309770257712 22.70602739978102 39 22.739150036342892 25.42806407390028 28.22186646057026 23.610919429186563 40 23.644502102367348 23.858419130162762 29.157580943443094 23.339497824026793 41 21.052655791400994 24.57883647538344 28.525490629054072 25.843017104161493 42 22.086358074102698 24.731568632863176 29.282250867169026 23.8998224258651 43 22.05783580372998 24.892121412864466 29.24268771794235 23.807355065463213 44 21.238970622061515 25.218287375675104 28.90778105937233 24.634960942891055 45 21.0899187575331 25.124439905416473 28.293172136502065 25.492469200548364 46 20.976289712661128 25.835196481639937 28.789551648311207 24.39896215738773 47 20.4339065389605 25.161702871548574 30.450743879212784 23.953646710278136 48 20.786754625668202 25.252330085474807 29.920321657603942 24.04059363125305 49 22.268532575192985 24.431624757330685 30.029350336286768 23.270492331189562 50 20.0378150100748 25.667743152354927 30.025210006716534 24.269231830853734 51 20.270593539245723 25.184244665875404 28.5572331557592 25.987928639119673 >>END_MODULE >>Per sequence GC content pass #GC Content Count 0 61.0 1 216.0 2 371.0 3 667.0 4 963.0 5 715.5 6 468.0 7 419.5 8 371.0 9 397.0 10 423.0 11 420.5 12 418.0 13 412.0 14 406.0 15 408.0 16 410.0 17 460.5 18 511.0 19 565.0 20 619.0 21 752.0 22 885.0 23 1015.5 24 1146.0 25 1246.5 26 1704.5 27 2062.0 28 2484.0 29 2906.0 30 3359.0 31 3812.0 32 4279.0 33 4746.0 34 5464.5 35 6183.0 36 7006.5 37 7830.0 38 8481.0 39 9132.0 40 10216.0 41 11300.0 42 12375.5 43 13451.0 44 14522.0 45 15593.0 46 16727.0 47 17861.0 48 18339.0 49 18817.0 50 18521.0 51 18225.0 52 16287.0 53 14349.0 54 13401.0 55 12453.0 56 11683.0 57 10913.0 58 10275.5 59 9638.0 60 8820.0 61 8002.0 62 7293.5 63 6585.0 64 5830.0 65 5075.0 66 4414.0 67 3753.0 68 3125.0 69 2497.0 70 2076.5 71 1656.0 72 1301.0 73 946.0 74 757.0 75 431.0 76 294.0 77 222.5 78 151.0 79 118.5 80 86.0 81 61.5 82 37.0 83 29.0 84 21.0 85 17.0 86 13.0 87 9.0 88 5.0 89 4.5 90 4.0 91 2.5 92 1.0 93 3.0 94 5.0 95 3.0 96 1.0 97 2.5 98 4.0 99 2.0 100 0.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 44 0.0 45 0.0 46 0.0 47 0.0 48 0.0 49 0.0 50 0.0 51 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 51 217374.0 >>END_MODULE >>Sequence Duplication Levels fail #Total Deduplicated Percentage 46.94694306807736 #Duplication Level Percentage of deduplicated Percentage of total 1 69.92565981986537 32.82795970560964 2 9.861694454268772 9.259528161986605 3 5.38617902198083 7.585939196982198 4 3.631681457838296 6.8198537057010675 5 2.5260505560806723 5.929517582170223 6 1.9132793861105304 5.389357104783424 7 1.5734073206221137 5.170666473289976 8 1.2475300702103445 4.685417854550367 9 0.9656362561006052 4.080030330566382 >10 2.9588854223873726 17.565624024776383 >50 0.004998117267545272 0.18396272021670546 >100 0.004998117267545272 0.5021431393670277 >500 0.0 0.0 >1k 0.0 0.0 >5k 0.0 0.0 >10k+ 0.0 0.0 >>END_MODULE >>Overrepresented sequences warn #Sequence Count Percentage Possible Source CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 438 0.20149603908471114 No Hit GCTGTCTCTTATACACATCTGACGCCTTCTCTGTCGTATGCCGTCTTCTGC 218 0.1002879829234407 TruSeq Adapter, Index 16 (95% over 21bp) >>END_MODULE >>Adapter Content fail #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 4.6003661891486563E-4 0.0 0.0 0.08464673788033528 0.0 2 4.6003661891486563E-4 0.0 0.0 0.4443953738717602 0.0 3 4.6003661891486563E-4 0.0 0.0 0.6182892158215794 0.0 4 4.6003661891486563E-4 0.0 0.0 0.8266858041900135 0.0 5 4.6003661891486563E-4 0.0 0.0 1.4665967411005916 0.0 6 4.6003661891486563E-4 0.0 0.0 1.9565357402449235 0.0 7 4.6003661891486563E-4 0.0 0.0 2.3503270860360486 0.0 8 4.6003661891486563E-4 0.0 0.0 3.163671828277531 0.0 9 4.6003661891486563E-4 0.0 0.0 3.484317351661192 0.0 10 4.6003661891486563E-4 0.0 0.0 4.17897264622264 0.0 11 4.6003661891486563E-4 0.0 0.0 5.01393910955312 0.0 12 4.6003661891486563E-4 0.0 0.0 5.638668838039508 0.0 13 4.6003661891486563E-4 0.0 0.0 5.911010516437108 0.0 14 4.6003661891486563E-4 0.0 0.0 6.055922051395291 0.0 15 4.6003661891486563E-4 0.0 0.0 6.28272010452032 0.0 16 4.6003661891486563E-4 0.0 0.0 6.757937931859376 0.0 17 4.6003661891486563E-4 0.0 0.0 7.355065463210871 0.0 18 4.6003661891486563E-4 0.0 0.0 8.003257059261918 0.0 19 4.6003661891486563E-4 0.0 0.0 8.396128331815213 0.0 20 4.6003661891486563E-4 0.0 0.0 8.754496857949892 0.0 21 4.6003661891486563E-4 0.0 0.0 9.223734209243055 0.0 22 4.6003661891486563E-4 0.0 0.0 9.704932512628005 0.0 23 4.6003661891486563E-4 0.0 0.0 10.189811108964273 0.0 24 4.6003661891486563E-4 0.0 0.0 10.567501173093378 0.0 25 4.6003661891486563E-4 0.0 0.0 10.941050907652249 0.0 26 4.6003661891486563E-4 0.0 0.0 11.264916687368315 0.0 27 4.6003661891486563E-4 0.0 0.0 11.617764774076017 0.0 28 4.6003661891486563E-4 0.0 0.0 11.943470700267742 0.0 29 4.6003661891486563E-4 0.0 0.0 12.352443254483056 0.0 30 4.6003661891486563E-4 0.0 0.0 12.823060715632964 0.0 31 4.6003661891486563E-4 0.0 0.0 13.206271219189047 0.0 32 9.200732378297313E-4 0.0 0.0 13.581661100223577 0.0 33 9.200732378297313E-4 0.0 0.0 13.977752629109277 0.0 34 9.200732378297313E-4 0.0 0.0 14.376144341089551 0.0 35 9.200732378297313E-4 0.0 0.0 14.778676382640057 0.0 36 9.200732378297313E-4 0.0 0.0 15.130144359491016 0.0 37 9.200732378297313E-4 0.0 0.0 15.518875302474077 0.0 38 9.200732378297313E-4 0.0 0.0 15.93796866230552 0.0 39 9.200732378297313E-4 0.0 0.0 16.48449216557638 0.0 >>END_MODULE >>Kmer Content fail #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position AAACACG 30 2.157356E-6 45.000004 40 CACAACG 30 2.157356E-6 45.000004 12 GATCGAA 20 7.0206536E-4 45.0 44 CCCACCG 20 7.0206536E-4 45.0 15 AGACGGC 20 7.0206536E-4 45.0 35 TATAGCG 20 7.0206536E-4 45.0 1 CGTTTTA 35 1.2058626E-7 45.0 1 AATACGG 25 3.880338E-5 45.0 2 AGAGACG 20 7.0206536E-4 45.0 33 CGAGATA 80 0.0 42.1875 19 AGGCGAT 70 0.0 41.785713 7 ACAAGCG 85 0.0 39.705883 14 AACGAGC 40 3.4410004E-7 39.375 15 TGACGGG 70 0.0 38.571426 3 AGTTACG 35 6.22494E-6 38.571426 1 CGTCATA 35 6.22494E-6 38.571426 38 AACACGT 35 6.22494E-6 38.571426 41 TACGGGA 65 9.094947E-12 38.076927 4 GTTGATC 30 1.1368787E-4 37.500004 16 CACGGGC 30 1.1368787E-4 37.500004 4 >>END_MODULE