SRR2936573.fastq FastQC Report

Basic Statistics

Measure	Value
Filename	SRR2936573.fastq
File type	Conventional base calls
Encoding	Sanger / Illumina 1.9
Total Sequences	128315
Sequences flagged as poor quality	0
Sequence length	51
%GC	44

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	201	0.1566457545883178	No Hit

Adapter graph

Kmer graph

Sequence	Count	PValue	Obs/Exp Max	Max Obs/Exp Position
CGGCGCA	20	7.0098514E-4	45.000004	22
CCGGGAT	20	7.0098514E-4	45.000004	5
ACACGGG	20	7.0098514E-4	45.000004	3
GCGCGAG	20	7.0098514E-4	45.000004	1
AATGGTC	20	7.0098514E-4	45.000004	10
CGCGAGG	20	7.0098514E-4	45.000004	2
CCTCGTG	20	7.0098514E-4	45.000004	34
ATCACAC	20	7.0098514E-4	45.000004	10
CGCTAGG	20	7.0098514E-4	45.000004	2
CGAGGGC	20	7.0098514E-4	45.000004	4
TAACGGG	25	3.8713944E-5	45.0	3
GCGATGC	25	3.8713944E-5	45.0	9
GCGATAC	25	3.8713944E-5	45.0	9
TGAGCGG	25	3.8713944E-5	45.0	2
ATGGGCG	30	2.150402E-6	44.999996	5
CAGGGCG	30	2.150402E-6	44.999996	5
AATGCGG	30	2.150402E-6	44.999996	2
CTAGCGG	30	2.150402E-6	44.999996	2
AGGGCGA	75	0.0	42.0	6
CGGGATA	70	0.0	41.785717	6