##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR2936573.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 128315 Sequences flagged as poor quality 0 Sequence length 51 %GC 44 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 32.05901102754939 33.0 31.0 34.0 30.0 34.0 2 32.19501227448077 33.0 31.0 34.0 30.0 34.0 3 32.08559404590266 33.0 31.0 34.0 30.0 34.0 4 35.799415500915714 37.0 35.0 37.0 35.0 37.0 5 35.89109613061606 37.0 35.0 37.0 35.0 37.0 6 35.87064645598722 37.0 35.0 37.0 35.0 37.0 7 26.837657327670186 36.0 10.0 37.0 0.0 37.0 8 31.245723415033318 37.0 19.0 37.0 17.0 37.0 9 36.13887698242606 39.0 32.0 39.0 32.0 39.0 10 36.7274909402642 38.0 35.0 39.0 33.0 39.0 11 37.088952967307016 39.0 37.0 39.0 34.0 39.0 12 37.21525152943927 39.0 37.0 39.0 34.0 39.0 13 37.23312161477614 39.0 37.0 39.0 34.0 39.0 14 38.450274714569616 40.0 38.0 41.0 34.0 41.0 15 38.53042122900674 40.0 38.0 41.0 34.0 41.0 16 38.45571445271403 40.0 38.0 41.0 34.0 41.0 17 38.39376534310096 40.0 38.0 41.0 34.0 41.0 18 38.310470326929824 40.0 37.0 41.0 34.0 41.0 19 38.196789151697 40.0 37.0 41.0 34.0 41.0 20 38.29175856291158 40.0 37.0 41.0 34.0 41.0 21 38.2252815337256 40.0 37.0 41.0 34.0 41.0 22 38.24255932665705 40.0 37.0 41.0 34.0 41.0 23 38.169574874332696 40.0 37.0 41.0 34.0 41.0 24 38.150192884697816 40.0 37.0 41.0 34.0 41.0 25 38.064146826169974 40.0 37.0 41.0 34.0 41.0 26 37.956879554222034 40.0 37.0 41.0 34.0 41.0 27 37.8830845965008 40.0 37.0 41.0 33.0 41.0 28 37.904181116782915 40.0 37.0 41.0 33.0 41.0 29 37.915652885477144 40.0 37.0 41.0 33.0 41.0 30 37.85641585161517 40.0 37.0 41.0 33.0 41.0 31 37.72823909909208 40.0 36.0 41.0 33.0 41.0 32 37.60884541947551 40.0 36.0 41.0 33.0 41.0 33 37.54737949577213 40.0 36.0 41.0 33.0 41.0 34 37.46409227292211 40.0 36.0 41.0 33.0 41.0 35 37.397358064139034 40.0 36.0 41.0 32.0 41.0 36 37.27348322487628 40.0 36.0 41.0 32.0 41.0 37 37.22991076647313 40.0 36.0 41.0 32.0 41.0 38 37.12969645014223 40.0 36.0 41.0 31.0 41.0 39 37.11615165802907 40.0 36.0 41.0 31.0 41.0 40 36.987967112184855 39.0 35.0 41.0 31.0 41.0 41 36.95970852978997 39.0 35.0 41.0 31.0 41.0 42 36.87464442972372 39.0 35.0 41.0 31.0 41.0 43 36.83475041889101 39.0 35.0 41.0 31.0 41.0 44 36.65110859992986 39.0 35.0 41.0 30.0 41.0 45 36.55409733858084 39.0 35.0 41.0 30.0 41.0 46 36.481346685890195 39.0 35.0 40.0 30.0 41.0 47 36.39102988738651 39.0 35.0 40.0 30.0 41.0 48 36.324911350972215 39.0 35.0 40.0 30.0 41.0 49 36.197778903479715 39.0 35.0 40.0 29.0 41.0 50 35.997256750964425 39.0 35.0 40.0 29.0 41.0 51 34.033285274519734 37.0 33.0 40.0 23.0 41.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 7 1.0 8 6.0 9 6.0 10 6.0 11 1.0 12 3.0 13 1.0 14 3.0 15 6.0 16 7.0 17 14.0 18 23.0 19 52.0 20 95.0 21 146.0 22 217.0 23 363.0 24 523.0 25 743.0 26 966.0 27 1149.0 28 1325.0 29 1617.0 30 2011.0 31 2678.0 32 3543.0 33 4802.0 34 7936.0 35 10338.0 36 11605.0 37 19401.0 38 26687.0 39 32029.0 40 12.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 37.82956006702256 22.32085103066672 28.604605852784164 11.244983049526555 2 30.282507890737637 24.877839691384484 28.09414331917547 16.745509098702414 3 31.198223122783773 24.220083388536022 28.2578030627752 16.323890425905 4 27.813583758718778 26.671082881970154 27.60706074893816 17.90827261037291 5 25.335307641351363 31.33304757822546 25.81070022990297 17.520944550520205 6 26.575225032147447 35.16424424268402 24.722752601020925 13.537778124147607 7 64.78354050578655 27.563418150644896 4.657288703581031 2.995752639987531 8 89.66917351829483 3.390094688851654 4.576238163893543 2.3644936289599814 9 83.89821922612322 6.964891088337295 6.060865837976854 3.076023847562639 10 36.10801543077582 39.15910065074231 12.81611658808401 11.91676733039785 11 27.19011806881503 28.647469118965045 28.419904142150177 15.74250867006975 12 25.775630284845885 25.71328371585551 30.103261504890312 18.407824494408292 13 22.382418267544715 28.101936640299265 31.797529517203753 17.718115574952265 14 20.043642598293264 30.287183883411917 29.95129174297627 19.717881775318553 15 18.746833963293458 28.809570198340023 34.12305654054475 18.320539297821767 16 22.396446245567546 27.723181233682737 32.07497174921093 17.80540077153879 17 22.980165997739938 26.591591006507425 29.323929392510617 21.104313603242023 18 23.888087908662275 26.770058060242373 30.49604488952967 18.845809141565677 19 23.132135759653977 28.870358103105637 28.780734910181977 19.21677122705841 20 24.899660990531114 28.205587811245763 29.027783189806332 17.866968008416787 21 23.054981880528388 28.576549896738495 29.947395082414367 18.421073140318747 22 23.005883957448468 25.28620971827144 30.02922495421424 21.678681370065853 23 20.48630323812493 28.217277792931455 30.47344425827066 20.822974710672952 24 20.47461325643923 27.659276000467596 31.8918287028017 19.97428204029147 25 19.89868682539064 29.540583719752174 30.193664029926353 20.367065424930832 26 20.257958929197677 31.60347582122121 28.853212796633287 19.285352452947823 27 20.280559560456688 29.662159529283404 30.60826871371235 19.449012196547557 28 18.419514476093987 29.436153216693295 32.20434087986595 19.939991427346765 29 19.959474730156256 27.374819779449012 31.402408136227255 21.26329735416748 30 21.0630090012859 28.495499357051006 30.693995246074113 19.747496395588982 31 22.754939017262206 28.68487706035927 28.43860811284729 20.12157580953123 32 21.84000311732845 29.44472586992947 28.53602462689475 20.17924638584733 33 22.131473327358453 29.08077777344816 28.748782293574404 20.038966605618985 34 20.665549623972257 29.263141487745003 29.314577407162062 20.75673148112068 35 19.710088454194754 29.777500681915598 29.734637415734717 20.77777344815493 36 22.278767096598216 29.591240307056854 28.877372092117053 19.252620504227878 37 21.552429567860344 29.32159139617348 28.979464598838796 20.146514437127383 38 20.625024354128513 29.888945173985892 28.69189104937069 20.794139422514903 39 21.03573237735261 28.50952733507384 29.609164945641588 20.845575341931966 40 21.634259439660212 28.627206484043178 29.66839418618244 20.070139890114174 41 20.081829871799865 29.701905467014768 29.146241670888053 21.070022990297314 42 22.26084245801348 28.317811635428434 28.450298094532982 20.971047812025095 43 22.456454818220784 27.43560768421463 28.63032381249269 21.477613685071894 44 21.299925963449322 28.329501617114133 28.735533647663953 21.635038771772592 45 20.823754042785332 28.908545376612242 28.254685734325687 22.01301484627674 46 22.076920079491877 29.530452402291235 28.195456493784825 20.197171024432063 47 20.666328956084634 29.44706386626661 29.010637883333985 20.87596929431477 48 21.83532712465417 28.167400537739155 28.842302147059968 21.154970190546702 49 21.698944004987723 27.33663250594241 30.28172855862526 20.682694930444608 50 20.345244125784205 28.17831118731247 29.47278182597514 22.003662860928188 51 20.243151619062463 27.966332852745197 28.450298094532982 23.340217433659355 >>END_MODULE >>Per sequence GC content warn #GC Content Count 0 44.0 1 127.0 2 210.0 3 337.0 4 464.0 5 349.0 6 234.0 7 220.5 8 207.0 9 209.5 10 212.0 11 208.5 12 205.0 13 200.5 14 196.0 15 216.5 16 237.0 17 271.5 18 306.0 19 351.0 20 396.0 21 452.5 22 509.0 23 760.0 24 1011.0 25 1220.5 26 1675.5 27 1921.0 28 2392.5 29 2864.0 30 3250.5 31 3637.0 32 3971.0 33 4305.0 34 5015.0 35 5725.0 36 5975.0 37 6225.0 38 6877.5 39 7530.0 40 8106.5 41 8683.0 42 9138.0 43 9593.0 44 9980.5 45 10368.0 46 10765.5 47 11163.0 48 11091.5 49 11020.0 50 10781.0 51 10542.0 52 9358.0 53 8174.0 54 7037.0 55 5900.0 56 5212.0 57 4524.0 58 4018.5 59 3513.0 60 3088.0 61 2663.0 62 2254.5 63 1846.0 64 1440.0 65 1034.0 66 809.5 67 585.0 68 459.0 69 333.0 70 270.5 71 208.0 72 158.0 73 108.0 74 94.0 75 67.0 76 54.0 77 39.5 78 25.0 79 21.5 80 18.0 81 13.0 82 8.0 83 5.0 84 2.0 85 1.0 86 0.0 87 0.5 88 1.0 89 1.0 90 1.0 91 1.0 92 1.0 93 0.5 94 0.0 95 0.0 96 0.0 97 0.0 98 0.0 99 0.0 100 0.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 44 0.0 45 0.0 46 0.0 47 0.0 48 0.0 49 0.0 50 0.0 51 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 51 128315.0 >>END_MODULE >>Sequence Duplication Levels warn #Total Deduplicated Percentage 52.760004675992676 #Duplication Level Percentage of deduplicated Percentage of total 1 69.67163473611132 36.75875774461287 2 11.703274789878728 12.349296652768578 3 6.165526817235114 9.758796711218485 4 3.949836777500406 8.33573627401317 5 2.657350920988493 7.010092350855317 6 1.7695977784014536 5.601839223785216 7 1.2703289561145659 4.691579316525737 8 0.9616094772448633 4.058761641273429 9 0.6248245912051877 2.966917351829482 >10 1.2171523951609329 8.055176713556483 >50 0.0073856334657823606 0.2564002649729182 >100 0.001477126693156472 0.1566457545883178 >500 0.0 0.0 >1k 0.0 0.0 >5k 0.0 0.0 >10k+ 0.0 0.0 >>END_MODULE >>Overrepresented sequences warn #Sequence Count Percentage Possible Source CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 201 0.1566457545883178 No Hit >>END_MODULE >>Adapter Content fail #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.07481588278845029 0.0 2 0.0 0.0 0.0 0.3429061294470639 0.0 3 0.0 0.0 0.0 0.4644819389782956 0.0 4 0.0 0.0 0.0 0.6273623504656509 0.0 5 0.0 0.0 0.0 1.098078946342984 0.0 6 0.0 0.0 0.0 1.3482445544168646 0.0 7 0.0 0.0 0.0 1.6077621478393018 0.0 8 0.0 0.0 0.0 2.2000545532478664 0.0 9 0.0 0.0 0.0 2.4065775630284847 0.0 10 0.0 0.0 0.0 3.0425125667303123 0.0 11 0.0 0.0 0.0 3.934068503292678 0.0 12 0.0 0.0 0.0 4.620660094299185 0.0 13 0.0 0.0 0.0 4.900440322643495 0.0 14 0.0 0.0 0.0 4.996298172466196 0.0 15 0.0 0.0 0.0 5.202821182246814 0.0 16 0.0 0.0 0.0 5.646261154190858 0.0 17 0.0 0.0 0.0 6.210497603553755 0.0 18 0.0 0.0 0.0 6.823831975996571 0.0 19 0.0 0.0 0.0 7.204925378950239 0.0 20 0.0 0.0 0.0 7.582901453454389 0.0 21 0.0 0.0 0.0 8.055176713556483 0.0 22 0.0 0.0 0.0 8.53758329111951 0.0 23 0.0 0.0 0.0 9.053501149514865 0.0 24 0.0 0.0 0.0 9.447063866266609 0.0 25 0.0 0.0 0.0 9.814129291197444 0.0 26 0.0 0.0 0.0 10.15080076374547 0.0 27 0.0 0.0 0.0 10.50461754276585 0.0 28 0.0 0.0 0.0 10.833495694190079 0.0 29 0.0 0.0 0.0 11.196664458559015 0.0 30 0.0 0.0 0.0 11.647897751626855 0.0 31 0.0 0.0 0.0 12.023535829793866 0.0 32 0.0 0.0 0.0 12.389821922612322 0.0 33 0.0 0.0 0.0 12.759225343880294 0.0 34 0.0 0.0 0.0 13.153567392744417 0.0 35 0.0 0.0 0.0 13.565834080193275 0.0 36 0.0 0.0 0.0 13.964072789619296 0.0 37 0.0 0.0 0.0 14.361532166932939 0.0 38 0.0 0.0 0.0 14.754315551572303 0.0 39 0.0 0.0 0.0 15.18996220239255 0.0 >>END_MODULE >>Kmer Content warn #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position CGGCGCA 20 7.0098514E-4 45.000004 22 CCGGGAT 20 7.0098514E-4 45.000004 5 ACACGGG 20 7.0098514E-4 45.000004 3 GCGCGAG 20 7.0098514E-4 45.000004 1 AATGGTC 20 7.0098514E-4 45.000004 10 CGCGAGG 20 7.0098514E-4 45.000004 2 CCTCGTG 20 7.0098514E-4 45.000004 34 ATCACAC 20 7.0098514E-4 45.000004 10 CGCTAGG 20 7.0098514E-4 45.000004 2 CGAGGGC 20 7.0098514E-4 45.000004 4 TAACGGG 25 3.8713944E-5 45.0 3 GCGATGC 25 3.8713944E-5 45.0 9 GCGATAC 25 3.8713944E-5 45.0 9 TGAGCGG 25 3.8713944E-5 45.0 2 ATGGGCG 30 2.150402E-6 44.999996 5 CAGGGCG 30 2.150402E-6 44.999996 5 AATGCGG 30 2.150402E-6 44.999996 2 CTAGCGG 30 2.150402E-6 44.999996 2 AGGGCGA 75 0.0 42.0 6 CGGGATA 70 0.0 41.785717 6 >>END_MODULE