##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR2936572.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 192149 Sequences flagged as poor quality 0 Sequence length 51 %GC 47 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 32.07518644385347 33.0 31.0 34.0 30.0 34.0 2 32.198793644515455 33.0 31.0 34.0 30.0 34.0 3 32.08751021342812 33.0 31.0 34.0 30.0 34.0 4 35.82241906020848 37.0 35.0 37.0 35.0 37.0 5 35.86999672129441 37.0 35.0 37.0 35.0 37.0 6 35.84436557046875 37.0 35.0 37.0 35.0 37.0 7 26.735512544952094 36.0 10.0 37.0 0.0 37.0 8 31.124351414787483 36.0 19.0 37.0 17.0 37.0 9 35.92321063341469 39.0 32.0 39.0 32.0 39.0 10 36.656287568501526 38.0 35.0 39.0 33.0 39.0 11 37.02794185762091 39.0 37.0 39.0 34.0 39.0 12 37.05513950111632 39.0 37.0 39.0 34.0 39.0 13 37.049836324935335 39.0 37.0 39.0 33.0 39.0 14 38.1710911844454 40.0 37.0 41.0 33.0 41.0 15 38.25307443702543 40.0 37.0 41.0 33.0 41.0 16 38.23115915253267 40.0 37.0 41.0 33.0 41.0 17 38.16550697635689 40.0 37.0 41.0 33.0 41.0 18 38.034030882284064 40.0 37.0 41.0 33.0 41.0 19 37.92377269722975 40.0 37.0 41.0 33.0 41.0 20 37.991537817006595 40.0 37.0 41.0 33.0 41.0 21 37.94346574793519 40.0 37.0 41.0 33.0 41.0 22 37.972989711109605 40.0 37.0 41.0 33.0 41.0 23 37.907051298731716 40.0 36.0 41.0 33.0 41.0 24 37.87656974535387 40.0 36.0 41.0 33.0 41.0 25 37.751708309697165 40.0 36.0 41.0 33.0 41.0 26 37.626003778317866 40.0 36.0 41.0 33.0 41.0 27 37.49920114078137 40.0 36.0 41.0 33.0 41.0 28 37.445524046443126 40.0 36.0 41.0 33.0 41.0 29 37.38721512992522 40.0 36.0 41.0 33.0 41.0 30 37.272777896320044 40.0 36.0 41.0 32.0 41.0 31 37.16284758182452 39.0 35.0 41.0 32.0 41.0 32 37.01839197705947 39.0 35.0 41.0 31.0 41.0 33 36.92768632675684 39.0 35.0 41.0 31.0 41.0 34 36.78759712514767 39.0 35.0 41.0 31.0 41.0 35 36.651640133438114 39.0 35.0 41.0 30.0 41.0 36 36.53240974452118 39.0 35.0 41.0 30.0 41.0 37 36.41453767649064 39.0 35.0 41.0 30.0 41.0 38 36.28740716839536 39.0 35.0 41.0 30.0 41.0 39 36.24368068530151 39.0 35.0 41.0 30.0 41.0 40 36.0501069482537 39.0 35.0 41.0 29.0 41.0 41 35.93976549448605 39.0 35.0 40.0 28.0 41.0 42 35.81500294042644 39.0 35.0 40.0 28.0 41.0 43 35.76752936523219 39.0 35.0 40.0 28.0 41.0 44 35.573523671733916 38.0 35.0 40.0 27.0 41.0 45 35.480653034884384 38.0 34.0 40.0 26.0 41.0 46 35.375146370785174 38.0 34.0 40.0 26.0 41.0 47 35.22799494142566 38.0 34.0 40.0 26.0 41.0 48 35.13115342780863 38.0 34.0 40.0 26.0 41.0 49 34.97954191799072 38.0 34.0 40.0 24.0 41.0 50 34.778557265455454 38.0 34.0 40.0 24.0 41.0 51 32.747794680170074 36.0 31.0 39.0 18.0 41.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 8 11.0 9 12.0 10 20.0 11 12.0 12 10.0 13 5.0 14 7.0 15 21.0 16 29.0 17 39.0 18 90.0 19 183.0 20 281.0 21 453.0 22 615.0 23 899.0 24 1343.0 25 1654.0 26 1986.0 27 2353.0 28 2707.0 29 3081.0 30 3823.0 31 4675.0 32 6071.0 33 8460.0 34 13184.0 35 15977.0 36 17786.0 37 28616.0 38 36512.0 39 41227.0 40 7.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 44.71113562912115 19.38391560715903 24.019380793030408 11.885567970689413 2 32.563791640862036 24.410743745738984 25.126854680482335 17.898609932916642 3 33.32413907956846 24.961878542173004 25.520299351024466 16.193683027234073 4 29.058699238611702 25.93976549448605 25.9231117518176 19.078423515084648 5 26.094853473085987 29.65927483359268 24.64025313688856 19.60561855643277 6 27.42350988035327 35.09672181484161 24.286881534642387 13.192886770162737 7 61.523088852921425 28.409723704000537 6.240469635543251 3.8267178075347776 8 83.17763818703195 5.627403733560935 7.561319600934692 3.6336384784724354 9 76.59628725624385 8.09528022524187 9.531665530395683 5.776766988118595 10 41.49123857006802 26.33945531852885 17.640476921555667 14.528829189847462 11 32.80318919172101 26.840628886957518 23.27985053265955 17.076331388661924 12 28.776106042706438 25.049310691182363 27.30589282275734 18.868690443353856 13 25.93768377665249 26.178122186428244 29.45630734482095 18.42788669209832 14 22.756818926978543 28.213521798187863 29.28768820030289 19.741971074530703 15 21.776329827373548 26.3228015758604 32.95775674086256 18.943111855903492 16 26.287412372689943 26.211429671765142 29.132600221702948 18.368557733841968 17 26.78234078761794 25.4614908222265 26.590822746930765 21.16534564322479 18 26.93951048405144 25.52758536344191 28.588751437686376 18.94415271482027 19 26.627252809018003 26.559596979427425 26.791708517868944 20.02144169368563 20 27.669152584712904 27.42871417493716 26.386814399242255 18.515318841107682 21 26.380048816283196 27.236155275333207 27.744094426720928 18.63970148166267 22 25.196592227906468 25.38238554455136 27.72119553055181 21.699826696990357 23 23.727940296332534 27.12634465961311 28.6543255494434 20.491389494610953 24 23.9673378471915 25.587434751156657 28.88799837626009 21.557229025391752 25 23.564525446398367 27.568709699243815 27.418826015227765 21.44793883913005 26 22.80782101390067 27.73889013213704 27.541647367407585 21.911641486554707 27 22.488797755908173 27.22054239158153 28.916621996471488 21.374037856038804 28 20.950408276910107 28.157315416681843 28.986359543895624 21.905916762512426 29 23.526534095935965 27.607741908622994 27.858588907566524 21.007135087874516 30 23.88042612764053 27.393845401225093 28.05114780717048 20.674580663963905 31 25.128415968857503 26.968134104262838 26.393059552742926 21.510390374136737 32 24.703225101353638 28.861456473882246 26.338414459612068 20.096903965152045 33 24.36754810069269 27.350649756178797 27.121140365029223 21.16066177809929 34 24.050086131075364 26.990512570973568 28.55492352289109 20.404477775059977 35 22.7302770246007 29.490135259616235 27.772197617473935 20.007390098309124 36 24.523156508751022 28.96606279501845 26.250982310602712 20.25979838562782 37 23.172642064231404 30.451368469260835 25.93976549448605 20.436223972021715 38 22.704255551681246 29.26062586846666 26.5226464878818 21.512472091970295 39 23.721695142831862 27.582761294620322 26.887467538212533 21.808076024335282 40 24.658988597390564 26.2894940905235 27.7409718499706 21.31054546211534 41 22.33683235405857 27.351170185637187 27.049841529229923 23.26215593107432 42 22.822393038735562 27.75346215697193 26.952000791052775 22.472144013239724 43 22.888487579950976 26.76620747440788 27.337639019719074 23.007665925922073 44 22.598608371628266 27.239798281541926 27.1508048441574 23.010788502672405 45 22.18642824058413 27.17838760545202 27.35949705697141 23.27568709699244 46 22.828117762777843 27.46098080135728 26.709480663443475 23.0014207724214 47 21.761237373080267 28.151070263181175 28.33842486820124 21.749267495537318 48 22.537197695538357 27.112813493694997 27.89866197586248 22.45132683490416 49 22.567382604124926 25.998574023284014 29.534371763579305 21.899671609011754 50 21.472919453132725 27.539565649574026 28.449276342838107 22.538238554455138 51 21.916845781138598 26.632457103601894 27.309535828966062 24.14116128629345 >>END_MODULE >>Per sequence GC content pass #GC Content Count 0 46.0 1 190.0 2 334.0 3 538.5 4 743.0 5 553.5 6 364.0 7 353.0 8 342.0 9 345.5 10 349.0 11 358.0 12 367.0 13 382.5 14 398.0 15 430.0 16 462.0 17 463.5 18 465.0 19 497.5 20 530.0 21 621.0 22 712.0 23 833.0 24 954.0 25 1202.0 26 1778.0 27 2106.0 28 2414.5 29 2723.0 30 3237.0 31 3751.0 32 4237.5 33 4724.0 34 5265.5 35 5807.0 36 6505.0 37 7203.0 38 7840.0 39 8477.0 40 9093.5 41 9710.0 42 10880.5 43 12051.0 44 12652.5 45 13254.0 46 14715.0 47 16176.0 48 15709.5 49 15243.0 50 14883.0 51 14523.0 52 13954.5 53 13386.0 54 12658.0 55 11930.0 56 10839.5 57 9749.0 58 9221.0 59 8693.0 60 8189.5 61 7686.0 62 6850.5 63 6015.0 64 5095.0 65 4175.0 66 3457.5 67 2740.0 68 2271.0 69 1802.0 70 1451.5 71 1101.0 72 902.5 73 704.0 74 548.0 75 305.0 76 218.0 77 176.5 78 135.0 79 103.0 80 71.0 81 53.5 82 36.0 83 27.0 84 18.0 85 15.5 86 13.0 87 10.0 88 7.0 89 6.5 90 6.0 91 5.0 92 4.0 93 3.5 94 3.0 95 2.0 96 1.0 97 0.5 98 0.0 99 0.0 100 0.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 44 0.0 45 0.0 46 0.0 47 0.0 48 0.0 49 0.0 50 0.0 51 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 51 192149.0 >>END_MODULE >>Sequence Duplication Levels fail #Total Deduplicated Percentage 47.10927457337795 #Duplication Level Percentage of deduplicated Percentage of total 1 66.90676093680953 31.519289717875193 2 11.049491825011048 10.41067088561481 3 6.483650022094564 9.163201473856226 4 4.295183384887317 8.093718936866702 5 3.0821917808219177 7.2599909445274236 6 2.2470172337604946 6.351321110180121 7 1.6217410517012816 5.3479331144060085 8 1.299160406539991 4.896200344524301 9 0.9600088378258949 4.070278794060859 >10 2.039328325231993 11.977163555365888 >50 0.008837825894829872 0.2622964470280876 >100 0.006628369421122405 0.647934675694383 >500 0.0 0.0 >1k 0.0 0.0 >5k 0.0 0.0 >10k+ 0.0 0.0 >>END_MODULE >>Overrepresented sequences warn #Sequence Count Percentage Possible Source CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 324 0.16861914451805632 No Hit GAATCTGTCTCTTATACACATCTGACGCGACATGAGTCGTATGCCGTCTTC 245 0.12750521730532036 No Hit GAATGATACCTGTCTCTTATACACATCTGACGCGACATGAGTCGTATGCCG 243 0.12646435838854223 No Hit GAATGATACGGCTGTCTCTTATACACATCTGACGCGACATGAGTCGTATGC 210 0.10929018626170314 No Hit >>END_MODULE >>Adapter Content fail #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0010408589167781254 0.0 0.0 0.04371607450468126 0.0 2 0.0010408589167781254 0.0 0.0 0.2675007416119782 0.0 3 0.0010408589167781254 0.0 0.0 0.35597374953811883 0.0 4 0.0010408589167781254 0.0 0.0 0.515225163805172 0.0 5 0.0010408589167781254 0.0 0.0 1.047624499737183 0.0 6 0.0010408589167781254 0.0 0.0 1.3432284321021708 0.0 7 0.0010408589167781254 0.0 0.0 1.561288375167188 0.0 8 0.0010408589167781254 0.0 0.0 1.9989695496723896 0.0 9 0.0010408589167781254 0.0 0.0 2.1608231112313883 0.0 10 0.0010408589167781254 0.0 0.0 2.7202847789996305 0.0 11 0.0010408589167781254 0.0 0.0 3.2006411690927354 0.0 12 0.0010408589167781254 0.0 0.0 3.7340813639415247 0.0 13 0.0010408589167781254 0.0 0.0 3.9589068899655997 0.0 14 0.0010408589167781254 0.0 0.0 4.059349775434689 0.0 15 0.0010408589167781254 0.0 0.0 4.225887202119189 0.0 16 0.0010408589167781254 0.0 0.0 4.53085886473518 0.0 17 0.0010408589167781254 0.0 0.0 4.882148749147797 0.0 18 0.0010408589167781254 0.0 0.0 5.266746118897314 0.0 19 0.0010408589167781254 0.0 0.0 5.497816798422058 0.0 20 0.0010408589167781254 0.0 0.0 5.738255208197804 0.0 21 0.0010408589167781254 0.0 0.0 6.014603250602397 0.0 22 0.0010408589167781254 0.0 0.0 6.291471722465379 0.0 23 0.0010408589167781254 0.0 0.0 6.602688538582038 0.0 24 0.0010408589167781254 0.0 0.0 6.85717854373429 0.0 25 0.0010408589167781254 0.0 0.0 7.087208364342255 0.0 26 0.0010408589167781254 0.0 0.0 7.319319902783777 0.0 27 0.0010408589167781254 0.0 0.0 7.554554017975634 0.0 28 0.0010408589167781254 0.0 0.0 7.775216108332596 0.0 29 0.0010408589167781254 0.0 0.0 8.025022248359345 0.0 30 0.0010408589167781254 0.0 0.0 8.347688512560564 0.0 31 0.001561288375167188 0.0 0.0 8.600617229337649 0.0 32 0.001561288375167188 0.0 0.0 8.858229811240236 0.0 33 0.001561288375167188 0.0 0.0 9.124689693935435 0.0 34 0.001561288375167188 0.0 0.0 9.407282889840696 0.0 35 0.001561288375167188 0.0 0.0 9.706009398956018 0.0 36 0.001561288375167188 0.0 0.0 9.961540263025048 0.0 37 0.001561288375167188 0.0 0.0 10.212907691426965 0.0 38 0.001561288375167188 0.0 0.0 10.512154630000676 0.0 39 0.001561288375167188 0.0 0.0 10.939427215338098 0.0 >>END_MODULE >>Kmer Content warn #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position GATCGTT 20 7.0186064E-4 45.000004 9 TTTCGTG 20 7.0186064E-4 45.000004 15 CGGGCTC 30 2.1560372E-6 45.000004 6 GAAACGT 20 7.0186064E-4 45.000004 9 GGCGATA 50 1.0713848E-9 40.5 8 CAGTCTC 45 1.9139407E-8 40.0 6 CGGGACC 40 3.4382174E-7 39.375004 6 AAGGGCG 40 3.4382174E-7 39.375004 5 AGGCGAT 110 0.0 38.863636 7 CACGCCG 65 9.094947E-12 38.07692 26 CGGTAGT 65 9.094947E-12 38.07692 12 TACGGGA 30 1.1363858E-4 37.500004 4 TATGCGG 30 1.1363858E-4 37.500004 2 TGGGCGA 115 0.0 37.173916 6 GCGATGC 80 0.0 36.562504 9 GGCGATG 240 0.0 36.562504 8 AACGTTC 25 0.0021027524 36.0 11 ATGGGCG 75 1.8189894E-12 36.0 5 CCCTACC 25 0.0021027524 36.0 20 CCACTAG 25 0.0021027524 36.0 33 >>END_MODULE