SRR2936570.fastq FastQC Report

Basic Statistics

Measure	Value
Filename	SRR2936570.fastq
File type	Conventional base calls
Encoding	Sanger / Illumina 1.9
Total Sequences	81280
Sequences flagged as poor quality	0
Sequence length	51
%GC	48

Per base quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
GAATGATACCTGTCTCTTATACACATCTGACGCAGTACGAGTCGTATGCCG	251	0.30880905511811024	No Hit
GAATGATACGGCTGTCTCTTATACACATCTGACGCAGTACGAGTCGTATGC	225	0.2768208661417323	No Hit
GAATCTGTCTCTTATACACATCTGACGCAGTACGAGTCGTATGCCGTCTTC	169	0.20792322834645668	No Hit
CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	121	0.14886811023622049	No Hit
GAGGAGCTGAGAACCCCAGTCTAATAATGTCCATCGACACCTCCTTATCCC	111	0.13656496062992127	No Hit
GCCAGACAAAGGTTGCCAATCTTTGTGGTATAAACCAGAAGCTAATGGCTG	83	0.10211614173228348	No Hit

Adapter graph

Kmer graph

Sequence	Count	PValue	Obs/Exp Max	Max Obs/Exp Position
ATCCTAG	25	3.8587797E-5	45.000004	14
AGGCGAT	25	3.8587797E-5	45.000004	7
ACGGGGC	35	1.1933844E-7	45.000004	5
ACGGGCG	20	6.9946056E-4	45.000004	5
ATCCGCC	20	6.9946056E-4	45.000004	18
CAGGGCG	25	3.8587797E-5	45.000004	5
ACTAATC	25	3.8587797E-5	45.000004	10
CACAAAT	25	3.8587797E-5	45.000004	32
AGGGCTA	20	6.9946056E-4	45.000004	6
TAAGCGG	20	6.9946056E-4	45.000004	2
AAGCGGG	45	3.7471182E-10	45.0	3
GCATGGG	60	3.6379788E-12	41.250004	3
TGCATGG	40	3.405621E-7	39.375004	2
TACGGCT	35	6.176917E-6	38.57143	7
AGCGGGC	35	6.176917E-6	38.57143	4
CAAGGAC	35	6.176917E-6	38.57143	5
ATGGGCG	30	1.1306112E-4	37.500004	5
ACAAATA	30	1.1306112E-4	37.500004	33
GGACTAA	30	1.1306112E-4	37.500004	8
TATGAGG	30	1.1306112E-4	37.500004	3