##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR2936569.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 178300 Sequences flagged as poor quality 0 Sequence length 51 %GC 45 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 31.85130117779024 31.0 31.0 34.0 30.0 34.0 2 31.974531688166014 33.0 31.0 34.0 30.0 34.0 3 31.8633202467751 33.0 31.0 34.0 30.0 34.0 4 35.64659001682558 37.0 35.0 37.0 33.0 37.0 5 35.75601233875491 37.0 35.0 37.0 35.0 37.0 6 35.73937745372967 37.0 35.0 37.0 35.0 37.0 7 27.079713965227146 35.0 18.0 37.0 0.0 37.0 8 31.330235558048233 36.0 25.0 37.0 17.0 37.0 9 36.02996634885025 39.0 32.0 39.0 32.0 39.0 10 36.57029725182277 38.0 35.0 39.0 32.0 39.0 11 36.95662927650028 39.0 37.0 39.0 33.0 39.0 12 37.093578238923165 39.0 37.0 39.0 34.0 39.0 13 37.09871564778463 39.0 37.0 39.0 33.0 39.0 14 38.202832305103755 40.0 37.0 41.0 33.0 41.0 15 38.278283791362874 40.0 37.0 41.0 34.0 41.0 16 38.21378014582165 40.0 37.0 41.0 34.0 41.0 17 38.148373527762196 40.0 37.0 41.0 33.0 41.0 18 38.081615255187884 40.0 37.0 41.0 33.0 41.0 19 37.98356141334829 40.0 37.0 41.0 33.0 41.0 20 38.01877734155917 40.0 37.0 41.0 34.0 41.0 21 37.94695457094784 40.0 37.0 41.0 33.0 41.0 22 37.966264722378014 40.0 37.0 41.0 33.0 41.0 23 37.908637128435224 40.0 37.0 41.0 33.0 41.0 24 37.90706113292204 40.0 37.0 41.0 33.0 41.0 25 37.82747055524397 39.0 36.0 41.0 33.0 41.0 26 37.72067863151991 39.0 36.0 41.0 33.0 41.0 27 37.62359506449803 39.0 36.0 41.0 33.0 41.0 28 37.636842400448685 39.0 36.0 41.0 33.0 41.0 29 37.645608524957936 40.0 36.0 41.0 33.0 41.0 30 37.57236118900729 40.0 36.0 41.0 33.0 41.0 31 37.45488502523836 39.0 36.0 41.0 33.0 41.0 32 37.34030286034773 39.0 36.0 41.0 32.0 41.0 33 37.312619181155355 39.0 36.0 41.0 32.0 41.0 34 37.2127201346046 39.0 36.0 41.0 32.0 41.0 35 37.13689848569826 39.0 36.0 41.0 32.0 41.0 36 36.97114974761638 39.0 35.0 41.0 31.0 41.0 37 36.856808749298935 39.0 35.0 41.0 31.0 41.0 38 36.72187324733595 39.0 35.0 41.0 30.0 41.0 39 36.688401570386986 39.0 35.0 41.0 30.0 41.0 40 36.504991587212565 39.0 35.0 40.0 30.0 41.0 41 36.44578799775659 39.0 35.0 40.0 30.0 41.0 42 36.37045989904655 39.0 35.0 40.0 30.0 41.0 43 36.32126191811554 39.0 35.0 40.0 30.0 41.0 44 36.06277061132922 39.0 35.0 40.0 29.0 41.0 45 35.92122265844083 39.0 35.0 40.0 28.0 41.0 46 35.718339876612454 38.0 35.0 40.0 27.0 41.0 47 35.54203589455973 38.0 35.0 40.0 27.0 41.0 48 35.49191811553561 38.0 35.0 40.0 26.0 41.0 49 35.316343241727424 38.0 34.0 40.0 26.0 41.0 50 35.04139091418957 38.0 34.0 40.0 24.0 41.0 51 32.63306786315199 36.0 31.0 39.0 17.0 40.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 8 5.0 9 13.0 10 13.0 11 7.0 12 6.0 13 2.0 14 3.0 15 1.0 16 8.0 17 20.0 18 31.0 19 61.0 20 122.0 21 202.0 22 333.0 23 550.0 24 845.0 25 1184.0 26 1657.0 27 1837.0 28 2434.0 29 2817.0 30 3482.0 31 4507.0 32 5842.0 33 7955.0 34 11739.0 35 15332.0 36 17535.0 37 27099.0 38 35185.0 39 37466.0 40 7.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 38.04879416713404 22.042624789680314 27.65675827257431 12.251822770611328 2 28.989904655075716 24.64834548513741 29.173303421200224 17.188446438586652 3 30.848569826135723 24.15423443634324 28.723499719573752 16.27369601794728 4 27.527762198541783 26.118339876612453 28.150308468872687 18.20358945597308 5 24.970835670218733 30.777902411665732 26.879416713404375 17.37184520471116 6 25.84576556365676 34.22546270330903 25.30005608524958 14.628715647784633 7 63.02523836231071 26.914189568143577 6.113292204150309 3.947279865395401 8 85.18620302860349 3.6404935501962985 6.830061693774538 4.343241727425687 9 79.16040381379698 7.192933258553001 8.986539540100953 4.660123387549075 10 34.61637689287717 37.37240605720695 15.41839596186203 12.59282108805384 11 25.45260796410544 27.22097588334268 29.34997195737521 17.97644419517667 12 24.85361749859787 24.341559169938307 31.644980370162646 19.159842961301177 13 22.887829500841278 27.223219293325858 32.019629837352774 17.86932136848009 14 19.347167694896243 30.236679753224905 30.49691531127314 19.91923724060572 15 17.561974200785194 27.860347728547392 35.5614133482894 19.016264722378015 16 20.38137969713965 27.985417835109367 31.42905215928211 20.204150308468876 17 20.01065619742008 26.800336511497473 29.026920919798094 24.162086371284353 18 21.599551318003364 26.48065058889512 31.74312955692653 20.176668536174986 19 21.402131239484014 28.56309590577678 29.27986539540101 20.75490745933819 20 22.30959057767807 29.052159282108807 30.045989904655073 18.592260235558047 21 21.755468311833987 28.21144139091419 30.819405496354456 19.21368480089736 22 20.777341559169937 25.653954010095344 29.589455973079083 23.979248457655636 23 17.832865956253503 28.4649467190129 30.049355019629836 23.652832305103757 24 19.810992708917556 26.74032529444756 31.87436904094223 21.574312955692655 25 18.775659001682556 28.773976444195178 30.19742007851935 22.252944475602916 26 18.42624789680314 29.519910263600675 30.108244531688165 21.94559730790802 27 19.726864834548515 28.32305103757712 31.080762759394283 20.86932136848009 28 17.696578799775658 27.726864834548515 32.481772293886706 22.09478407178912 29 17.928210880538415 25.523275378575434 34.21985417835109 22.32865956253505 30 20.128435221536737 26.333707234997195 32.94111048794167 20.596747055524396 31 22.03589455973079 27.79753224901851 29.286595625350532 20.87997756590017 32 20.522153673583848 27.04823331463825 30.829500841278744 21.60011217049916 33 20.446999439147504 26.351093662366797 30.675827257431294 22.5260796410544 34 20.34828939988783 25.351093662366797 31.462142456533932 22.838474481211442 35 17.99551318003365 25.0 33.190689848569825 23.813796971396524 36 21.536174985978686 25.06057206954571 31.641615255187887 21.761637689287717 37 20.85249579360628 26.09814918676388 32.482893998878296 20.566461020751543 38 19.352215367358387 26.181155356141332 31.063376332024678 23.403252944475604 39 20.64385866517106 24.756590016825577 32.10880538418396 22.490745933819404 40 21.84913067863152 23.98766124509254 31.319685922602357 22.843522153673586 41 19.143578238923165 24.50252383623107 30.40886146943354 25.94503645541223 42 20.525518788558607 23.907459338194055 31.17722938867078 24.389792484576557 43 21.02692091979809 24.02355580482333 31.111048794167136 23.838474481211442 44 20.431856421761076 24.63320246775098 31.28266965787998 23.652271452607966 45 20.86315199102636 24.23948401570387 30.968031407739765 23.929332585530005 46 22.288278182837914 25.135726303982054 30.450925406618058 22.125070106561974 47 19.116657319125068 25.210880538418394 32.50757150869321 23.16489063376332 48 19.787436904094225 23.840717891194615 32.1491867638811 24.22265844083006 49 20.612450925406616 22.592821088053842 32.666853617498596 24.127874369040942 50 19.728547392035896 22.702187324733593 32.92372406057207 24.64554122265844 51 19.215367358384743 22.53785754346607 30.78238923163208 27.464385866517105 >>END_MODULE >>Per sequence GC content fail #GC Content Count 0 91.0 1 153.0 2 215.0 3 525.0 4 835.0 5 612.5 6 390.0 7 357.0 8 324.0 9 325.0 10 326.0 11 324.5 12 323.0 13 334.5 14 346.0 15 380.5 16 415.0 17 416.5 18 418.0 19 427.0 20 436.0 21 565.0 22 694.0 23 815.5 24 937.0 25 1118.0 26 1602.0 27 1905.0 28 2381.0 29 2857.0 30 3328.0 31 3799.0 32 4346.5 33 4894.0 34 5748.5 35 6603.0 36 6945.5 37 7288.0 38 8156.5 39 9025.0 40 10228.0 41 11431.0 42 12664.5 43 13898.0 44 14973.0 45 16048.0 46 17566.0 47 19084.0 48 19877.0 49 20670.0 50 19016.5 51 17363.0 52 14401.5 53 11440.0 54 9602.5 55 7765.0 56 6587.5 57 5410.0 58 4600.0 59 3790.0 60 3355.0 61 2920.0 62 2454.5 63 1989.0 64 1630.0 65 1271.0 66 998.0 67 725.0 68 586.0 69 447.0 70 365.5 71 284.0 72 216.0 73 148.0 74 125.0 75 71.5 76 41.0 77 35.0 78 29.0 79 22.5 80 16.0 81 9.5 82 3.0 83 3.0 84 3.0 85 1.5 86 0.0 87 1.5 88 3.0 89 1.5 90 0.0 91 0.0 92 0.0 93 0.0 94 0.0 95 0.0 96 0.0 97 0.0 98 0.0 99 0.0 100 0.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 44 0.0 45 0.0 46 0.0 47 0.0 48 0.0 49 0.0 50 0.0 51 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 51 178300.0 >>END_MODULE >>Sequence Duplication Levels warn #Total Deduplicated Percentage 55.340437464946724 #Duplication Level Percentage of deduplicated Percentage of total 1 75.2381628020107 41.63712843522154 2 10.264310037295282 11.36062815479529 3 4.447056915842387 7.383062254627033 4 2.8457921193449005 6.299495232753785 5 1.7755796983946814 4.913067863151991 6 1.3965461326414788 4.637128435221537 7 1.0489297875790498 4.063376332024678 8 0.7236095346197503 3.2035894559730793 9 0.5888195232690124 2.932697700504767 >10 1.6519377330955085 12.223219293325856 >50 0.01114804605156478 0.3869882220975883 >100 0.008107669855683477 0.9596186203028604 >500 0.0 0.0 >1k 0.0 0.0 >5k 0.0 0.0 >10k+ 0.0 0.0 >>END_MODULE >>Overrepresented sequences warn #Sequence Count Percentage Possible Source CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 403 0.22602355580482333 No Hit CCTGTCTCTTATACACATCTGACGCTTGTTGCCTCGTATGCCGTCTTCTGC 282 0.15816040381379698 TruSeq Adapter, Index 21 (95% over 21bp) GCTGTCTCTTATACACATCTGACGCTTGTTGCCTCGTATGCCGTCTTCTGC 269 0.15086932136848008 TruSeq Adapter, Index 21 (95% over 21bp) CTGTCTCTTATACACATCTGACGCTTGTTGCCTCGTATGCCGTCTTCTGCT 234 0.13123948401570387 TruSeq Adapter, Index 14 (95% over 22bp) TCTGTCTCTTATACACATCTGACGCTTGTTGCCTCGTATGCCGTCTTCTGC 184 0.10319685922602355 TruSeq Adapter, Index 21 (95% over 21bp) >>END_MODULE >>Adapter Content fail #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.2142456533931576 0.0 2 5.608524957936063E-4 0.0 0.0 0.9921480650588895 0.0 3 5.608524957936063E-4 0.0 0.0 1.3510936623667975 0.0 4 5.608524957936063E-4 0.0 0.0 1.793606281547953 0.0 5 5.608524957936063E-4 0.0 0.0 3.06225462703309 0.0 6 5.608524957936063E-4 0.0 0.0 3.777902411665732 0.0 7 5.608524957936063E-4 0.0 0.0 4.539540100953449 0.0 8 5.608524957936063E-4 0.0 0.0 6.039820527201346 0.0 9 5.608524957936063E-4 0.0 0.0 6.596186203028603 0.0 10 5.608524957936063E-4 0.0 0.0 7.9848569826135725 0.0 11 5.608524957936063E-4 0.0 0.0 9.861469433538979 0.0 12 5.608524957936063E-4 0.0 0.0 11.327537857543467 0.0 13 5.608524957936063E-4 0.0 0.0 11.94223219293326 0.0 14 5.608524957936063E-4 0.0 0.0 12.153112731351655 0.0 15 5.608524957936063E-4 0.0 0.0 12.56758272574313 0.0 16 5.608524957936063E-4 0.0 0.0 13.522153673583848 0.0 17 5.608524957936063E-4 0.0 0.0 14.795288839035333 0.0 18 5.608524957936063E-4 0.0 0.0 16.18003365114975 0.0 19 5.608524957936063E-4 0.0 0.0 16.98429613011778 0.0 20 5.608524957936063E-4 0.0 0.0 17.772293886707796 0.0 21 5.608524957936063E-4 0.0 0.0 18.698822209758834 0.0 22 5.608524957936063E-4 0.0 0.0 19.790802019068984 0.0 23 5.608524957936063E-4 0.0 0.0 20.80257992148065 0.0 24 5.608524957936063E-4 0.0 0.0 21.57375210319686 0.0 25 5.608524957936063E-4 0.0 0.0 22.260796410544028 0.0 26 5.608524957936063E-4 0.0 0.0 22.885586090858105 0.0 27 5.608524957936063E-4 0.0 0.0 23.509814918676387 0.0 28 5.608524957936063E-4 0.0 0.0 24.179472798653954 0.0 29 5.608524957936063E-4 0.0 0.0 24.86483454851374 0.0 30 5.608524957936063E-4 0.0 0.0 25.64105440269209 0.0 31 5.608524957936063E-4 0.0 0.0 26.38754907459338 0.0 32 5.608524957936063E-4 0.0 0.0 27.03757711721817 0.0 33 5.608524957936063E-4 0.0 0.0 27.680314077397643 0.0 34 5.608524957936063E-4 0.0 0.0 28.314077397644418 0.0 35 5.608524957936063E-4 0.0 0.0 29.022994952327537 0.0 36 5.608524957936063E-4 0.0 0.0 29.63600673022995 0.0 37 5.608524957936063E-4 0.0 0.0 30.308468872686483 0.0 38 5.608524957936063E-4 0.0 0.0 30.98934380257992 0.0 39 5.608524957936063E-4 0.0 0.0 31.708356702187324 0.0 >>END_MODULE >>Kmer Content warn #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position GCGCGAC 20 7.017245E-4 45.0 9 GGCGTAG 20 7.017245E-4 45.0 1 AGGACAC 20 7.017245E-4 45.0 7 GTTAGCG 20 7.017245E-4 45.0 1 TTCCGCG 20 7.017245E-4 45.0 1 GCGTTTG 20 7.017245E-4 45.0 1 CGCGACC 20 7.017245E-4 45.0 10 AGGCGAT 45 3.8016879E-10 45.0 7 CGAATAT 35 1.2042256E-7 45.0 14 GCCTATC 20 7.017245E-4 45.0 41 CGAGCGG 20 7.017245E-4 45.0 2 GGCGCGA 20 7.017245E-4 45.0 8 GCTACGA 35 1.2042256E-7 45.0 10 TAGGATC 20 7.017245E-4 45.0 6 AGCTACG 35 1.2042256E-7 45.0 9 TCCGCGG 25 3.8775157E-5 44.999996 2 CTACGGG 30 2.1551605E-6 44.999996 3 TTTTGCG 30 2.1551605E-6 44.999996 1 GCGCTAG 25 3.8775157E-5 44.999996 1 CTAGGGC 65 0.0 41.538464 4 >>END_MODULE