SRR2936568.fastq FastQC Report

Basic Statistics

Measure	Value
Filename	SRR2936568.fastq
File type	Conventional base calls
Encoding	Sanger / Illumina 1.9
Total Sequences	195238
Sequences flagged as poor quality	0
Sequence length	51
%GC	45

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	1682	0.8615126153720075	No Hit
GATACTGAAGCTACGAATATACTGACTATGAAGACCTATGCTTTGATTCAT	288	0.14751226707915469	No Hit
CGTTTTATTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	277	0.14187811798932584	No Hit

Adapter graph

Kmer graph

Sequence	Count	PValue	Obs/Exp Max	Max Obs/Exp Position
GCGAGAC	35	1.2050077E-7	45.0	21
TAAAGCG	20	7.0188876E-4	45.0	1
GGATCGA	20	7.0188876E-4	45.0	8
TATGCGG	25	3.878875E-5	45.0	2
CGTTTTA	140	0.0	45.0	1
ACACGAC	30	2.1562191E-6	44.999996	26
CGTTTTT	840	0.0	43.125	1
AGCGACT	90	0.0	42.5	19
CACAACG	90	0.0	42.5	12
TACGGCT	40	3.4385994E-7	39.375	7
ATGCATA	40	3.4385994E-7	39.375	26
GAGCGAC	105	0.0	38.57143	18
TGCGGGC	35	6.221677E-6	38.571426	4
AGACACG	35	6.221677E-6	38.571426	24
GTGAAAC	35	6.221677E-6	38.571426	37
AACGAGC	100	0.0	38.25	15
GGCGATA	65	9.094947E-12	38.076927	8
TCGCAGG	30	1.13645365E-4	37.499996	2
TTGCCGG	30	1.13645365E-4	37.499996	2
CACCGGG	30	1.13645365E-4	37.499996	3