##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR2936568.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 195238 Sequences flagged as poor quality 0 Sequence length 51 %GC 45 >>END_MODULE >>Per base sequence quality fail #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 31.99930341429435 33.0 31.0 34.0 30.0 34.0 2 32.12930372161157 33.0 31.0 34.0 30.0 34.0 3 31.753019391716776 33.0 31.0 34.0 30.0 34.0 4 35.62506274393304 37.0 35.0 37.0 33.0 37.0 5 35.80787039408312 37.0 35.0 37.0 35.0 37.0 6 35.80318892838484 37.0 35.0 37.0 35.0 37.0 7 26.142963972177547 35.0 0.0 37.0 0.0 37.0 8 30.830693819850644 35.0 19.0 37.0 17.0 37.0 9 35.90148434218749 39.0 32.0 39.0 32.0 39.0 10 36.689076921500934 38.0 35.0 39.0 33.0 39.0 11 37.06750735000359 39.0 37.0 39.0 34.0 39.0 12 37.20995400485561 39.0 37.0 39.0 34.0 39.0 13 37.2125662012518 39.0 37.0 39.0 34.0 39.0 14 38.43533533430992 40.0 38.0 41.0 34.0 41.0 15 38.50962415103617 40.0 38.0 41.0 34.0 41.0 16 38.44895460924615 40.0 38.0 41.0 34.0 41.0 17 38.37594115899569 40.0 38.0 41.0 34.0 41.0 18 38.216192544484166 40.0 37.0 41.0 34.0 41.0 19 38.0371085546871 40.0 37.0 41.0 34.0 41.0 20 38.03402001659513 40.0 37.0 41.0 34.0 41.0 21 37.965339739190114 40.0 36.0 41.0 33.0 41.0 22 37.98033169772278 40.0 36.0 41.0 33.0 41.0 23 37.92333459674858 40.0 36.0 41.0 33.0 41.0 24 37.87520871961401 40.0 36.0 41.0 33.0 41.0 25 37.758622809084294 40.0 36.0 41.0 33.0 41.0 26 37.64679007160491 40.0 36.0 41.0 33.0 41.0 27 37.52678269599156 40.0 36.0 41.0 33.0 41.0 28 37.4989756092564 40.0 36.0 41.0 33.0 41.0 29 37.47040535141724 40.0 36.0 41.0 33.0 41.0 30 37.36088261506469 40.0 35.0 41.0 33.0 41.0 31 37.18367838228214 39.0 35.0 41.0 32.0 41.0 32 36.98721560351981 39.0 35.0 41.0 31.0 41.0 33 36.80271258668907 39.0 35.0 41.0 31.0 41.0 34 36.503001464878764 39.0 35.0 41.0 30.0 41.0 35 36.29432794845266 39.0 35.0 41.0 29.0 41.0 36 36.03384587016872 39.0 35.0 41.0 28.0 41.0 37 35.923196303998196 39.0 35.0 41.0 27.0 41.0 38 35.732214015714156 39.0 35.0 41.0 26.0 41.0 39 35.61431688503263 39.0 35.0 41.0 26.0 41.0 40 35.40870117497618 39.0 35.0 40.0 24.0 41.0 41 35.24864012128786 39.0 35.0 40.0 24.0 41.0 42 35.12127762013542 38.0 34.0 40.0 23.0 41.0 43 35.12088835165285 38.0 34.0 40.0 23.0 41.0 44 34.94050338561141 38.0 34.0 40.0 23.0 41.0 45 34.82095698583267 38.0 34.0 40.0 23.0 41.0 46 34.634538358311396 38.0 34.0 40.0 22.0 41.0 47 34.47139901043854 38.0 34.0 40.0 21.0 41.0 48 34.407917516057324 38.0 34.0 40.0 21.0 41.0 49 34.26694598387609 38.0 33.0 40.0 20.0 41.0 50 34.0673127157623 38.0 33.0 40.0 20.0 41.0 51 32.047956852661876 35.0 30.0 39.0 13.0 40.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 7 2.0 8 7.0 9 17.0 10 20.0 11 9.0 12 9.0 13 7.0 14 9.0 15 9.0 16 26.0 17 42.0 18 81.0 19 153.0 20 256.0 21 369.0 22 668.0 23 1055.0 24 1644.0 25 2335.0 26 3113.0 27 3414.0 28 3477.0 29 3695.0 30 4139.0 31 4847.0 32 6257.0 33 7984.0 34 12056.0 35 15278.0 36 17968.0 37 28947.0 38 37175.0 39 40165.0 40 5.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 32.131552259293784 22.62879152623977 25.796719900838976 19.44293631362747 2 32.061893688728624 26.109159077638573 24.467572911011175 17.36137432262162 3 29.27452647537877 24.198158145442996 29.993136582017843 16.53417879716039 4 26.636208115223468 25.006402442147536 30.07611223224987 18.281277210379127 5 25.600036878066767 27.61296468925107 27.942306313320152 18.84469211936201 6 26.467183642528607 32.45218656204222 27.17094008338541 13.909689712043763 7 59.23846792120386 29.081428820209183 8.519857814564787 3.160245444022168 8 84.01540683678382 4.0202214732787676 9.504297319169424 2.4600743707679857 9 77.62474518280253 6.882881406283612 11.191468873887256 4.300904537026604 10 35.89465165592764 34.67409008492199 17.43922801913562 11.992030240014753 11 26.656695930095577 25.152890318483085 31.549186121554207 16.641227629867135 12 25.814646738852066 22.649791536483676 32.75899158975199 18.77657013491226 13 22.717401325561625 24.055255636710065 34.33501674878866 18.892326288939653 14 20.203034245382558 26.215183519601716 33.03967465349983 20.542107581515893 15 18.907692150093734 26.006207807906247 35.55199295219168 19.534107089808337 16 22.64876714574007 26.16908593613948 32.84094284924041 18.341204068880035 17 23.286962579006136 24.944426802159416 31.337649432999726 20.430961185834725 18 24.081889796043804 24.275499646585192 32.08647906657515 19.55613149079585 19 22.77732818406253 26.658744711582788 30.618014935617044 19.945912168737642 20 23.988670238375725 26.196744486216822 31.404234831334065 18.410350444073387 21 24.156158124955184 25.62718323277231 32.1530644649095 18.06359417736301 22 23.757670125692744 23.300791854044807 31.5870885790676 21.354449441194852 23 21.441010459029492 25.88737848164804 32.307747467193884 20.36386359212858 24 21.349839682848625 25.766500373902623 32.944918509716345 19.938741433532407 25 21.70223009864883 27.10589127116647 30.851576025159037 20.340302605025663 26 21.158278613794444 27.386062139542506 30.138087872237985 21.31757137442506 27 20.560034419528986 27.063379055306857 31.697722779376964 20.678863745787194 28 19.519765619397862 26.638256896710683 32.74823548694414 21.093741996947315 29 20.22864401397269 25.573914914104833 32.37535725627183 21.822083815650643 30 21.479425111914686 25.896597998340486 31.81347893340436 20.810497956340466 31 21.849742365727984 26.505086100042003 30.124258597199315 21.5209129370307 32 22.01979122916645 26.58703735953042 30.264600129073234 21.128571282229895 33 21.833864309202102 26.28740306702589 29.350331390405554 22.528401233366456 34 20.64710763273543 26.967598520779767 31.22035669285692 21.16493715362788 35 20.91037605384198 25.991354142123974 30.87001505854393 22.22825474549012 36 21.621815425275816 27.911574591011995 29.58338028457575 20.88322969913644 37 21.371351888464336 27.310257224515723 29.931673137401532 21.386717749618413 38 21.108083467357787 27.463915836056508 29.65662422274352 21.77137647384218 39 21.82362040176605 26.429281185015213 29.016892203362048 22.73020620985669 40 23.19784058431248 25.97598828096989 30.087380530429524 20.7387906042881 41 21.320644546655878 26.609573955889736 30.426453866562863 21.643327630891527 42 21.302717708642785 26.947622901279466 30.12374640182751 21.62591298825024 43 21.883547260266955 26.679232526454893 29.572111986396095 21.865108226882064 44 21.877400915805325 26.8380130917137 28.820721375961643 22.463864616519324 45 21.69864473104621 26.33093967362911 28.472428523135868 23.497987072188817 46 22.03413269957693 27.284647455925587 28.11440395824583 22.56681588625165 47 20.612278347452854 26.84774480377795 30.7855028221965 21.754474026572694 48 20.878619940790216 26.793452094366877 30.487917311179174 21.840010653663732 49 21.426668988619017 25.80952478513404 30.113502494391458 22.650303731855477 50 20.930863868714084 26.01491512922689 30.57755150124464 22.476669500814392 51 20.818693082289307 26.043598070047842 29.256599637365678 23.881109210297176 >>END_MODULE >>Per sequence GC content warn #GC Content Count 0 61.0 1 206.5 2 352.0 3 1873.0 4 3394.0 5 2365.5 6 1337.0 7 1205.0 8 1073.0 9 995.0 10 917.0 11 933.5 12 950.0 13 906.0 14 862.0 15 858.0 16 854.0 17 810.5 18 767.0 19 814.0 20 861.0 21 947.5 22 1034.0 23 1126.5 24 1219.0 25 1415.0 26 1948.0 27 2285.0 28 2750.0 29 3215.0 30 3587.5 31 3960.0 32 4838.5 33 5717.0 34 6321.0 35 6925.0 36 7424.5 37 7924.0 38 8412.5 39 8901.0 40 9744.0 41 10587.0 42 11367.0 43 12147.0 44 12937.0 45 13727.0 46 14535.5 47 15344.0 48 15470.5 49 15597.0 50 14834.5 51 14072.0 52 13116.0 53 12160.0 54 11143.5 55 10127.0 56 9303.0 57 8479.0 58 7717.0 59 6955.0 60 6465.0 61 5975.0 62 5456.5 63 4938.0 64 4259.0 65 3580.0 66 3075.0 67 2570.0 68 2084.5 69 1599.0 70 1347.5 71 1096.0 72 981.0 73 866.0 74 710.5 75 444.5 76 334.0 77 234.0 78 134.0 79 103.5 80 73.0 81 62.0 82 51.0 83 36.5 84 22.0 85 19.5 86 17.0 87 9.0 88 1.0 89 4.0 90 7.0 91 5.0 92 3.0 93 2.5 94 2.0 95 1.5 96 1.0 97 0.5 98 0.0 99 0.0 100 0.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 44 0.0 45 0.0 46 0.0 47 0.0 48 0.0 49 0.0 50 0.0 51 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 51 195238.0 >>END_MODULE >>Sequence Duplication Levels warn #Total Deduplicated Percentage 52.06143830653184 #Duplication Level Percentage of deduplicated Percentage of total 1 68.8885352845628 35.864362297446085 2 12.065918604472916 12.563381540768031 3 6.624610761912443 10.346602934582746 4 4.051991204480162 8.438099604426144 5 2.7529820110260816 7.166210156301315 6 1.8129877874898777 5.663205110933996 7 1.1889919797119455 4.333044281911422 8 0.812994515634135 3.3860531055388208 9 0.5939959929607023 2.7831857167665652 >10 1.1969919252075512 7.850291324931358 >50 0.002999979762424892 0.1192198894760434 >100 0.005999959524849784 0.6106765517703008 >500 0.0 0.0 >1k 9.999932541416307E-4 0.8756674851471833 >5k 0.0 0.0 >10k+ 0.0 0.0 >>END_MODULE >>Overrepresented sequences warn #Sequence Count Percentage Possible Source CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 1682 0.8615126153720075 No Hit GATACTGAAGCTACGAATATACTGACTATGAAGACCTATGCTTTGATTCAT 288 0.14751226707915469 No Hit CGTTTTATTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 277 0.14187811798932584 No Hit >>END_MODULE >>Adapter Content fail #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.021000010243907435 0.0 2 0.0 0.0 0.0 0.1557073930279966 0.0 3 0.0 0.0 0.0 0.2484147553242709 0.0 4 0.0 0.0 0.0 0.3959270224034256 0.0 5 0.0 0.0 0.0 0.906585808090638 0.0 6 0.0 0.0 0.0 1.2758786711603274 0.0 7 0.0 0.0 0.0 1.5652690562288079 0.0 8 0.0 0.0 0.0 2.11690347166023 0.0 9 0.0 0.0 0.0 2.385806041856606 0.0 10 0.0 0.0 0.0 3.043977094622973 0.0 11 0.0 0.0 0.0 3.6007334637724213 0.0 12 0.0 0.0 0.0 4.217928886794579 0.0 13 0.0 0.0 0.0 4.447392413362153 0.0 14 0.0 0.0 0.0 4.54470953400465 0.0 15 0.0 0.0 0.0 4.717319374302134 0.0 16 0.0 0.0 0.0 4.986221944498509 0.0 17 0.0 0.0 0.0 5.322222108401029 0.0 18 0.0 0.0 0.0 5.685368627009086 0.0 19 0.0 0.0 0.0 5.897417510935371 0.0 20 0.0 0.0 0.0 6.143783484772432 0.0 21 0.0 0.0 0.0 6.433173869840912 0.0 22 0.0 0.0 0.0 6.7640520800254045 0.0 23 0.0 0.0 0.0 7.0626619817863325 0.0 24 0.0 0.0 0.0 7.2992962435591435 0.0 25 0.0 0.0 0.0 7.521076839549678 0.0 26 0.0 0.0 0.0 7.721857425296305 0.0 27 0.0 0.0 0.0 7.960540468556326 0.0 28 0.0 0.0 0.0 8.191540581239307 0.0 29 0.0 0.0 0.0 8.441491922678987 0.0 30 0.0 0.0 0.0 8.75290670873498 0.0 31 0.0 0.0 0.0 9.029492209508394 0.0 32 0.0 0.0 0.0 9.284053309294297 0.0 33 0.0 0.0 0.0 9.546809535029041 0.0 34 0.0 0.0 0.0 9.816736495969023 0.0 35 0.0 0.0 0.0 10.112273225499134 0.0 36 0.0 0.0 0.0 10.380663600323707 0.0 37 0.0 0.0 0.0 10.659297882584333 0.0 38 0.0 0.0 0.0 10.945615095421998 0.0 39 0.0 0.0 0.0 11.344103094684437 0.0 >>END_MODULE >>Kmer Content fail #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position GCGAGAC 35 1.2050077E-7 45.0 21 TAAAGCG 20 7.0188876E-4 45.0 1 GGATCGA 20 7.0188876E-4 45.0 8 TATGCGG 25 3.878875E-5 45.0 2 CGTTTTA 140 0.0 45.0 1 ACACGAC 30 2.1562191E-6 44.999996 26 CGTTTTT 840 0.0 43.125 1 AGCGACT 90 0.0 42.5 19 CACAACG 90 0.0 42.5 12 TACGGCT 40 3.4385994E-7 39.375 7 ATGCATA 40 3.4385994E-7 39.375 26 GAGCGAC 105 0.0 38.57143 18 TGCGGGC 35 6.221677E-6 38.571426 4 AGACACG 35 6.221677E-6 38.571426 24 GTGAAAC 35 6.221677E-6 38.571426 37 AACGAGC 100 0.0 38.25 15 GGCGATA 65 9.094947E-12 38.076927 8 TCGCAGG 30 1.13645365E-4 37.499996 2 TTGCCGG 30 1.13645365E-4 37.499996 2 CACCGGG 30 1.13645365E-4 37.499996 3 >>END_MODULE