SRR2936565.fastq FastQC Report

Basic Statistics

Measure	Value
Filename	SRR2936565.fastq
File type	Conventional base calls
Encoding	Sanger / Illumina 1.9
Total Sequences	75778
Sequences flagged as poor quality	0
Sequence length	51
%GC	47

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	192	0.25337169099210854	No Hit
GCTGTCTCTTATACACATCTGACGCAGTGCCATTCGTATGCCGTCTTCTGC	121	0.15967695109398505	No Hit
CTGTCTCTTATACACATCTGACGCAGTGCCATTCGTATGCCGTCTTCTGCT	116	0.1530787299743989	No Hit
CCTGTCTCTTATACACATCTGACGCAGTGCCATTCGTATGCCGTCTTCTGC	108	0.14252157618306105	No Hit

Adapter graph

Kmer graph

Sequence	Count	PValue	Obs/Exp Max	Max Obs/Exp Position
ATGGGCT	20	6.99159E-4	45.000004	5
ATAGGAT	35	1.1919474E-7	45.000004	5
TCCTGTA	20	6.99159E-4	45.000004	12
TTTAATG	20	6.99159E-4	45.000004	20
TAAACCA	20	6.99159E-4	45.000004	31
GTAGGGC	20	6.99159E-4	45.000004	4
CAAGGGT	20	6.99159E-4	45.000004	4
GGTATCC	20	6.99159E-4	45.000004	9
GTCAAGC	20	6.99159E-4	45.000004	16
GCGATGT	20	6.99159E-4	45.000004	9
CGAGACA	20	6.99159E-4	45.000004	22
CTAATGG	20	6.99159E-4	45.000004	42
AGTCGGG	20	6.99159E-4	45.000004	3
ATTGGGC	25	3.8562874E-5	44.999996	4
GGTTGCC	25	3.8562874E-5	44.999996	11
GCCAGAC	25	3.8562874E-5	44.999996	1
CAATCTT	25	3.8562874E-5	44.999996	17
GTGGTAT	25	3.8562874E-5	44.999996	25
TAGTAGG	25	3.8562874E-5	44.999996	2
CTATCTC	50	1.0531949E-9	40.499996	5