##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR2936563.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 153885 Sequences flagged as poor quality 0 Sequence length 51 %GC 48 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 32.058972609416124 33.0 31.0 34.0 30.0 34.0 2 32.181726614029955 33.0 31.0 34.0 30.0 34.0 3 32.00651785424181 33.0 31.0 34.0 30.0 34.0 4 35.77190109497352 37.0 35.0 37.0 35.0 37.0 5 35.867024076420705 37.0 35.0 37.0 35.0 37.0 6 35.838021899470384 37.0 35.0 37.0 35.0 37.0 7 26.80048087857816 36.0 10.0 37.0 0.0 37.0 8 31.165474217760014 36.0 19.0 37.0 17.0 37.0 9 36.013698541118366 39.0 32.0 39.0 32.0 39.0 10 36.75328329596777 38.0 35.0 39.0 33.0 39.0 11 37.111167430223865 39.0 37.0 39.0 34.0 39.0 12 37.10495499886279 39.0 37.0 39.0 34.0 39.0 13 37.02723462325763 39.0 37.0 39.0 33.0 39.0 14 38.10206322903467 40.0 37.0 41.0 33.0 41.0 15 38.221931962179546 40.0 37.0 41.0 33.0 41.0 16 38.21753907138447 40.0 37.0 41.0 33.0 41.0 17 38.12695194463398 40.0 37.0 41.0 33.0 41.0 18 38.02311466354745 40.0 37.0 41.0 33.0 41.0 19 37.90244663222536 40.0 37.0 41.0 33.0 41.0 20 37.928004678818596 40.0 36.0 41.0 33.0 41.0 21 37.84567046820678 40.0 36.0 41.0 33.0 41.0 22 37.88154141079377 40.0 36.0 41.0 33.0 41.0 23 37.80872729635767 40.0 36.0 41.0 33.0 41.0 24 37.748318549566235 40.0 36.0 41.0 33.0 41.0 25 37.63224485817331 40.0 36.0 41.0 33.0 41.0 26 37.520174156025604 40.0 35.0 41.0 33.0 41.0 27 37.4136205608084 39.0 35.0 41.0 33.0 41.0 28 37.35121681775352 39.0 35.0 41.0 33.0 41.0 29 37.292458654189815 39.0 35.0 41.0 32.0 41.0 30 37.179887578386456 39.0 35.0 41.0 32.0 41.0 31 37.0520388601878 39.0 35.0 41.0 31.0 41.0 32 36.888618123923706 39.0 35.0 41.0 31.0 41.0 33 36.76668941092374 39.0 35.0 41.0 31.0 41.0 34 36.55186665366995 39.0 35.0 41.0 30.0 41.0 35 36.44541703219937 39.0 35.0 41.0 30.0 41.0 36 36.22369301751308 39.0 35.0 41.0 30.0 41.0 37 36.11686649121097 39.0 35.0 41.0 29.0 41.0 38 35.90647561490724 39.0 35.0 40.0 28.0 41.0 39 35.80521818240894 39.0 35.0 40.0 28.0 41.0 40 35.62440783702115 38.0 35.0 40.0 27.0 41.0 41 35.50180979302726 38.0 35.0 40.0 26.0 41.0 42 35.39765409234168 38.0 35.0 40.0 26.0 41.0 43 35.38543717711278 38.0 34.0 40.0 26.0 41.0 44 35.19778405952497 38.0 34.0 40.0 26.0 41.0 45 35.08135295837801 38.0 34.0 40.0 25.0 41.0 46 34.99289729343341 38.0 34.0 40.0 25.0 41.0 47 34.83674172271501 38.0 34.0 40.0 24.0 41.0 48 34.75624654774669 37.0 34.0 40.0 24.0 41.0 49 34.62552555479741 37.0 34.0 40.0 24.0 41.0 50 34.41905318906976 37.0 33.0 40.0 23.0 41.0 51 32.355674692140234 35.0 30.0 39.0 18.0 40.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 7 2.0 8 7.0 9 7.0 10 12.0 11 12.0 12 6.0 13 6.0 14 10.0 15 17.0 16 18.0 17 53.0 18 86.0 19 148.0 20 242.0 21 351.0 22 534.0 23 784.0 24 1082.0 25 1490.0 26 1896.0 27 2091.0 28 2409.0 29 2582.0 30 3040.0 31 3957.0 32 4995.0 33 7097.0 34 10834.0 35 13254.0 36 14721.0 37 23214.0 38 28644.0 39 30280.0 40 4.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 42.70266757643695 19.790752834909185 24.63333008415375 12.873249504500114 2 32.03951002371901 24.29671507944244 26.1721415342626 17.49163336257595 3 32.14803262176301 23.80024043928908 27.34184618383858 16.709880755109335 4 27.900055236052896 25.57299281931312 27.598531370828866 18.928420573805113 5 25.691262956103582 30.261558956363515 24.99203951002372 19.05513857750918 6 27.332098645092113 34.76232251356532 24.10176430451311 13.803814536829451 7 62.38944666471716 27.816876238749717 6.278714624557299 3.5149624719758266 8 85.31240861682426 4.665821879975306 6.969490203723559 3.052279299476882 9 79.302076225753 7.155993111739285 8.789030769730644 4.752899892777074 10 41.94235955421256 30.6852519738766 14.506287162491471 12.866101309419372 11 33.14942976898333 26.349546739448286 23.390193976021052 17.110829515547323 12 29.30565032329337 24.44812684797089 26.99938265587939 19.246840172856352 13 26.0259284530656 25.84267472463203 29.054163823634532 19.07723299866784 14 22.403743054878646 27.298307177437696 30.177080287227476 20.120869480456186 15 21.075478441693473 25.125255872892094 33.29564285018033 20.503622835234104 16 26.720603047730446 25.419631543035383 28.662962601943008 19.196802807291157 17 27.046170841862434 24.564447477012056 26.75634402313416 21.63303765799136 18 27.77723624784742 23.401891022516814 28.211326640023394 20.609546089612373 19 27.01042986645872 26.193586119504825 26.154595964518958 20.6413880495175 20 28.313350878903076 26.295610358384508 26.319004451376028 19.072034311336388 21 26.713454852649704 26.116905481365954 27.90265457971862 19.266985086265716 22 26.773239756961363 23.29466809630568 27.45166845371544 22.480423693017514 23 24.045228579783604 26.528251616466843 27.835071644409787 21.591448159339766 24 23.77684634629756 25.79068785131754 29.207525099912274 21.224940702472626 25 24.2791695096988 26.78688631120642 27.054618708776033 21.879325470318744 26 24.083568898853038 26.870715144426033 26.775839100627092 22.269876856093838 27 23.65662670175781 26.400883776846346 27.82467426974689 22.11781525164896 28 21.53426259869383 27.449069110049713 28.32764726906456 22.689021022191895 29 23.081521915716284 27.00523117912727 27.66026578288982 22.252981122266625 30 25.300711570328495 25.88946291061507 27.84936803457127 20.96045748448517 31 26.019430093901292 26.27351593722585 26.429476557169313 21.277577411703543 32 26.72320239139617 26.005783539656235 25.78938817948468 21.48162588946291 33 26.133801215193163 25.95444650225818 25.242226337849694 22.66952594469896 34 23.11206420378854 28.0254735679241 27.78243493517887 21.08002729310849 35 24.11281151509244 28.069662410241413 26.87851317542321 20.939012899242943 36 25.899860285277963 28.86051272053806 25.120057185560647 20.11956980862332 37 24.505962244533254 28.75199012249407 25.242876173766128 21.49917145920655 38 24.20638788705852 28.86376190012022 25.44627481560906 21.483575397212203 39 24.28501803294668 27.04032231861455 25.550898398154466 23.123761250284304 40 26.631575527179386 25.899210449361536 26.23777496182214 21.231439061636937 41 23.372648406277417 25.89661110569581 26.578938817948465 24.151801670078303 42 24.451376027553042 26.386587386684862 26.647171589173734 22.51486499658836 43 24.115410858758164 26.15654547226825 26.88176235500536 22.846281313968223 44 23.791142736459044 26.28326347597232 27.131299346914904 22.794294440653733 45 23.45647723949703 26.228677258992107 26.354745426779736 23.96010007473113 46 24.010787276212756 26.92270201774052 25.549598726321605 23.51691197972512 47 22.937258342268578 27.213828508301653 27.368489456412252 22.480423693017514 48 23.273223511063456 27.144945901159957 27.744094616109432 21.837735971667154 49 24.67426974688891 25.899860285277963 27.066965591188225 22.358904376644897 50 22.50121844234331 27.50625467069565 27.44192091496897 22.55060597199207 51 23.46947395782565 26.460018845241578 25.613932482048284 24.45657471488449 >>END_MODULE >>Per sequence GC content warn #GC Content Count 0 45.0 1 135.5 2 226.0 3 730.5 4 1235.0 5 870.0 6 505.0 7 444.5 8 384.0 9 384.0 10 384.0 11 377.0 12 370.0 13 369.0 14 368.0 15 375.0 16 382.0 17 382.0 18 382.0 19 373.5 20 365.0 21 450.5 22 536.0 23 599.0 24 662.0 25 792.5 26 1035.5 27 1148.0 28 1355.0 29 1562.0 30 1991.5 31 2421.0 32 2843.5 33 3266.0 34 3763.5 35 4261.0 36 4645.5 37 5030.0 38 5387.0 39 5744.0 40 6533.0 41 7322.0 42 7900.5 43 8479.0 44 9214.5 45 9950.0 46 10865.0 47 11780.0 48 11896.0 49 12012.0 50 12075.5 51 12139.0 52 11564.0 53 10989.0 54 10199.5 55 9410.0 56 8973.0 57 8536.0 58 8026.5 59 7517.0 60 6764.5 61 6012.0 62 5638.0 63 5264.0 64 4722.5 65 4181.0 66 3607.0 67 3033.0 68 2720.0 69 2407.0 70 2030.5 71 1654.0 72 1352.0 73 1050.0 74 943.5 75 695.0 76 553.0 77 420.5 78 288.0 79 202.5 80 117.0 81 91.0 82 65.0 83 47.5 84 30.0 85 24.5 86 19.0 87 20.5 88 22.0 89 16.0 90 10.0 91 8.0 92 6.0 93 4.0 94 2.0 95 1.5 96 1.0 97 1.0 98 1.0 99 0.5 100 0.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 44 0.0 45 0.0 46 0.0 47 0.0 48 0.0 49 0.0 50 0.0 51 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 51 153885.0 >>END_MODULE >>Sequence Duplication Levels warn #Total Deduplicated Percentage 51.368879357962115 #Duplication Level Percentage of deduplicated Percentage of total 1 68.4676592999279 35.171069305000486 2 12.006476995281409 12.335185365695162 3 6.422598641349037 9.897650843162102 4 4.092398385811332 8.40887675861845 5 2.7552530708800873 7.076713129934692 6 1.9456286607041202 5.9966858368262015 7 1.3991321838353425 5.031029665009585 8 0.9766094447747599 4.013386619878481 9 0.6401092992953737 2.9593527634272347 >10 1.2802185985907475 8.146992884296715 >50 0.010120305127199584 0.3769048315300387 >100 0.002530076281799896 0.1787048770185528 >500 0.001265038140899948 0.4074471196023004 >1k 0.0 0.0 >5k 0.0 0.0 >10k+ 0.0 0.0 >>END_MODULE >>Overrepresented sequences warn #Sequence Count Percentage Possible Source CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 627 0.4074471196023004 No Hit GATACTGAAGCTACGAATATACTGACTATGAAGACCTATGCTTTGATTCAT 166 0.1078727621275628 No Hit >>END_MODULE >>Adapter Content fail #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.044188842317314875 0.0 2 0.0 0.0 0.0 0.1754556974363973 0.0 3 0.0 0.0 0.0 0.24238879682880074 0.0 4 0.0 0.0 0.0 0.353510738538519 0.0 5 0.0 0.0 0.0 0.6855768918348117 0.0 6 0.0 0.0 0.0 0.9266660168307502 0.0 7 0.0 0.0 0.0 1.1580076030802222 0.0 8 0.0 0.0 0.0 1.6668291256457743 0.0 9 0.0 0.0 0.0 1.9241641485524905 0.0 10 0.0 0.0 0.0 2.4388341943659224 0.0 11 0.0 0.0 0.0 2.8924196640348314 0.0 12 0.0 0.0 0.0 3.346654969620171 0.0 13 0.0 0.0 0.0 3.5500536114631056 0.0 14 0.0 0.0 0.0 3.6566267017578062 0.0 15 0.0 0.0 0.0 3.7891932287097507 0.0 16 0.0 0.0 0.0 4.025083666374241 0.0 17 0.0 0.0 0.0 4.330506547096858 0.0 18 0.0 0.0 0.0 4.643727458816649 0.0 19 0.0 0.0 0.0 4.865321506319654 0.0 20 0.0 0.0 0.0 5.08691555382266 0.0 21 0.0 0.0 0.0 5.338402053481496 0.0 22 0.0 0.0 0.0 5.58858888130747 0.0 23 0.0 0.0 0.0 5.858920622542808 0.0 24 0.0 0.0 0.0 6.073366474965072 0.0 25 0.0 0.0 0.0 6.27351593722585 0.0 26 0.0 0.0 0.0 6.45027130649511 0.0 27 0.0 0.0 0.0 6.68031322091172 0.0 28 0.0 0.0 0.0 6.906456119829743 0.0 29 0.0 0.0 0.0 7.154693439906423 0.0 30 0.0 0.0 0.0 7.504305162946356 0.0 31 0.0 0.0 0.0 7.781135263346005 0.0 32 0.0 0.0 0.0 8.024173896091236 0.0 33 0.0 0.0 0.0 8.2386197485135 0.0 34 0.0 0.0 0.0 8.518049192578873 0.0 35 0.0 0.0 0.0 8.826721252883647 0.0 36 0.0 0.0 0.0 9.080807096208208 0.0 37 0.0 0.0 0.0 9.354388017025702 0.0 38 0.0 0.0 0.0 9.687753842154855 0.0 39 0.0 0.0 0.0 10.216070442213342 0.0 >>END_MODULE >>Kmer Content fail #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position GCGAGAC 60 0.0 45.000004 21 GTTGATC 25 3.875017E-5 45.000004 16 ACACGTG 60 0.0 45.000004 42 ACTAAGG 25 3.875017E-5 45.000004 3 CGCATAG 20 7.0142304E-4 45.0 2 AGGCGAT 70 0.0 45.0 7 TTATCGT 20 7.0142304E-4 45.0 23 TACGCGG 20 7.0142304E-4 45.0 2 AGTAGCG 20 7.0142304E-4 45.0 1 TATCGTA 20 7.0142304E-4 45.0 24 GTTATCG 20 7.0142304E-4 45.0 22 CGACCAA 65 0.0 41.53846 29 CACGACC 65 0.0 41.53846 27 TCAAGCG 65 0.0 41.53846 17 ACGACCA 65 0.0 41.53846 28 AGCGACT 55 6.002665E-11 40.909092 19 GCCCTAG 50 1.0677468E-9 40.500004 20 CGAATAT 50 1.0677468E-9 40.500004 14 ATGGGCG 35 6.2130803E-6 38.571426 5 ACACGAC 70 0.0 38.571426 26 >>END_MODULE