##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR2936561.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 258813 Sequences flagged as poor quality 0 Sequence length 51 %GC 44 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 31.96116887482468 33.0 31.0 34.0 30.0 34.0 2 32.09018866903904 33.0 31.0 34.0 30.0 34.0 3 31.58097158952603 33.0 31.0 34.0 28.0 34.0 4 35.53185504592118 37.0 35.0 37.0 33.0 37.0 5 35.75614826148609 37.0 35.0 37.0 35.0 37.0 6 35.790516705111415 37.0 35.0 37.0 35.0 37.0 7 26.960763176501953 35.0 11.0 37.0 0.0 37.0 8 31.281029160049922 37.0 21.0 37.0 17.0 37.0 9 36.06723000776623 39.0 32.0 39.0 32.0 39.0 10 36.77425013426683 38.0 35.0 39.0 33.0 39.0 11 37.130298709879334 39.0 37.0 39.0 34.0 39.0 12 37.26682199116737 39.0 37.0 39.0 34.0 39.0 13 37.301572950354114 39.0 37.0 39.0 34.0 39.0 14 38.60050306592018 40.0 38.0 41.0 35.0 41.0 15 38.65655511894688 40.0 38.0 41.0 35.0 41.0 16 38.56493298250088 40.0 38.0 41.0 34.0 41.0 17 38.464938005432494 40.0 38.0 41.0 34.0 41.0 18 38.28546479504507 40.0 38.0 41.0 34.0 41.0 19 38.0918075985364 40.0 37.0 41.0 34.0 41.0 20 38.041929887602244 40.0 36.0 41.0 34.0 41.0 21 37.9751094419523 40.0 36.0 41.0 33.0 41.0 22 37.96570496845212 40.0 36.0 41.0 34.0 41.0 23 37.88813544914668 40.0 36.0 41.0 33.0 41.0 24 37.81905854806366 40.0 36.0 41.0 33.0 41.0 25 37.70212856386657 40.0 35.0 41.0 33.0 41.0 26 37.61465227789949 40.0 35.0 41.0 33.0 41.0 27 37.51449115770846 40.0 35.0 41.0 33.0 41.0 28 37.49363440012673 40.0 35.0 41.0 33.0 41.0 29 37.441036578533534 40.0 35.0 41.0 33.0 41.0 30 37.328155849976625 39.0 35.0 41.0 33.0 41.0 31 37.17860772063227 39.0 35.0 41.0 32.0 41.0 32 36.95252170486027 39.0 35.0 41.0 31.0 41.0 33 36.72324033182259 39.0 35.0 41.0 31.0 41.0 34 36.394999478387874 39.0 35.0 41.0 30.0 41.0 35 36.187648997538766 39.0 35.0 41.0 29.0 41.0 36 35.9457639299417 39.0 35.0 41.0 27.0 41.0 37 35.83252386858465 39.0 35.0 41.0 26.0 41.0 38 35.68244639952398 39.0 35.0 41.0 25.0 41.0 39 35.61769308342317 39.0 35.0 41.0 25.0 41.0 40 35.49873460761245 39.0 35.0 41.0 25.0 41.0 41 35.39524676117506 39.0 35.0 40.0 24.0 41.0 42 35.31631332274654 39.0 35.0 40.0 24.0 41.0 43 35.29787529992697 39.0 35.0 40.0 24.0 41.0 44 35.10063636679765 39.0 35.0 40.0 23.0 41.0 45 35.00734507153814 38.0 34.0 40.0 23.0 41.0 46 34.905553430469105 38.0 34.0 40.0 23.0 41.0 47 34.79909819058548 38.0 34.0 40.0 23.0 41.0 48 34.71009570616623 38.0 34.0 40.0 22.0 41.0 49 34.592253866691394 38.0 34.0 40.0 22.0 41.0 50 34.38161143373787 38.0 34.0 40.0 21.0 41.0 51 32.510260303771446 36.0 31.0 39.0 15.0 41.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 7 1.0 8 9.0 9 15.0 10 12.0 11 14.0 12 8.0 13 11.0 14 4.0 15 20.0 16 32.0 17 51.0 18 105.0 19 184.0 20 323.0 21 553.0 22 882.0 23 1357.0 24 2179.0 25 3268.0 26 4307.0 27 4708.0 28 4585.0 29 4724.0 30 5086.0 31 6058.0 32 7665.0 33 10069.0 34 15316.0 35 19943.0 36 22698.0 37 37075.0 38 49717.0 39 57821.0 40 13.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 37.87522265110331 19.581705710300486 23.566435998191746 18.976635640404464 2 35.45880616506899 23.322244245845454 25.327939477537836 15.891010111547722 3 30.18550072832508 22.88988574762473 31.316046720991604 15.60856680305858 4 26.70576825739047 24.218257970040145 31.73140452759328 17.344569244976103 5 23.751511709226353 29.004339040156406 29.609409110052432 17.63474014056481 6 24.911422532871224 33.32715126365368 28.37685896767164 13.384567235803457 7 58.7729364444599 27.11687589108739 10.589498981890399 3.520688682562313 8 80.93179245246567 4.036118742103372 12.030693975959476 3.001394829471472 9 74.59323913404658 7.20017928002071 13.740809001093455 4.465772584839247 10 36.5823973293459 30.312233156757966 20.367214938971383 12.738154574924753 11 26.040036628762852 25.26611878074131 31.949708863156022 16.744135727339817 12 24.439653340442714 23.35044993875887 33.68223389087874 18.527662829919674 13 21.906936668559926 23.89022189766356 35.23934269144131 18.9634987423352 14 19.602956574824294 26.25988648174551 34.385830696294235 19.751326247135964 15 19.011796161707487 25.53619794987114 36.76283648812076 18.689169400300603 16 22.000054093109696 24.993721335481602 34.717344182865624 18.28888038854308 17 22.440140178429985 24.564453872100707 33.1826453848918 19.812760564577513 18 22.025168751183287 25.11543083229977 33.030025539675364 19.82937487684158 19 22.98184403410957 26.64897049220866 31.420755526190725 18.948429947491046 20 23.49688771429565 26.046991457152462 32.01462059479238 18.44150023375951 21 23.330744591654977 25.77150297705293 32.424182711069385 18.47356972022271 22 22.0356009937677 24.44544903076739 32.31792838845035 21.201021587014562 23 20.682500492633675 25.878143679026945 33.166031072627725 20.273324755711652 24 20.867576203668285 25.23173101814824 34.02456599938952 19.876126778793957 25 20.57276875581984 26.64897049220866 32.297836661991475 20.480424089980023 26 20.255937684737628 27.26679108081897 31.952027139285892 20.525244095157507 27 20.18948043568136 26.51605599409612 32.919907423506544 20.374556146715967 28 19.262556363088407 26.623469454780093 33.75757786509951 20.356396317031987 29 20.53413082032201 26.103016463624318 32.911793457052 20.45105925900167 30 21.02831001533926 25.740979008009646 32.81172120411262 20.418989772538474 31 21.38416540127428 26.2208621668927 31.406845869411505 20.988126562421517 32 21.588560080057803 27.552325424147938 30.904166328584733 19.95494816720953 33 21.468009721304572 26.666357563182686 30.94550891956741 20.920123795945337 34 20.066998180153238 27.757106482286435 31.825294710853008 20.350600626707312 35 20.348282350577442 27.507119039615475 30.985305993130176 21.159292616676908 36 20.61179307067265 28.596708820654293 29.978015014701736 20.81348309397132 37 20.209185782785255 28.945995757554684 30.318415226437622 20.526403233222442 38 20.782959124928038 28.52947881288807 29.891079659831615 20.79648240235228 39 20.861394133988632 27.519869558329756 29.610954627472346 22.007781680209263 40 22.093944276369427 27.096397785273535 30.142226240567517 20.667431697789524 41 19.536499325768027 27.907021672018022 30.05645002376233 22.50002897845162 42 20.393102355754927 28.008639442377316 29.77477947398315 21.823478727884613 43 21.241591419287285 26.83790999679305 30.029789848268827 21.890708735650836 44 20.537221855161835 27.794585279719335 29.99347018890087 21.674722676217964 45 20.71804739329168 27.31392936212632 29.76743826623856 22.20058497834344 46 20.62724824487178 28.00091185527775 29.370626668675836 22.00121323117463 47 20.36914683574627 27.25094952726486 30.55372025361941 21.82618338336946 48 20.302303207335026 26.634288076719486 30.82689045758907 22.23651825835642 49 20.50631150676357 26.432984432775786 30.637950953004676 22.42275310745596 50 19.446472936058083 27.033031571057098 30.69513509754147 22.825360395343356 51 19.910900920742 26.48050909343812 30.021289502459304 23.587300483360572 >>END_MODULE >>Per sequence GC content fail #GC Content Count 0 103.0 1 267.0 2 431.0 3 3554.0 4 6677.0 5 4636.0 6 2595.0 7 2256.0 8 1917.0 9 1800.5 10 1684.0 11 1657.5 12 1631.0 13 1578.5 14 1526.0 15 1455.5 16 1385.0 17 1383.0 18 1381.0 19 1370.5 20 1360.0 21 1404.0 22 1448.0 23 1575.0 24 1702.0 25 2125.5 26 2867.5 27 3186.0 28 3813.0 29 4440.0 30 5095.5 31 5751.0 32 6598.5 33 7446.0 34 8150.5 35 8855.0 36 9705.5 37 10556.0 38 11340.0 39 12124.0 40 12965.0 41 13806.0 42 14818.0 43 15830.0 44 16519.5 45 17209.0 46 18646.5 47 20084.0 48 19699.0 49 19314.0 50 18540.0 51 17766.0 52 16310.5 53 14855.0 54 13424.0 55 11993.0 56 11165.0 57 10337.0 58 9891.5 59 9446.0 60 8850.5 61 8255.0 62 7465.5 63 6676.0 64 5675.5 65 4675.0 66 3868.0 67 3061.0 68 2684.0 69 2307.0 70 1943.5 71 1580.0 72 1328.0 73 1076.0 74 914.0 75 629.0 76 506.0 77 391.0 78 276.0 79 210.0 80 144.0 81 102.5 82 61.0 83 46.0 84 31.0 85 22.5 86 14.0 87 9.0 88 4.0 89 3.5 90 3.0 91 1.5 92 0.0 93 0.5 94 1.0 95 0.5 96 0.0 97 2.0 98 4.0 99 2.0 100 0.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 44 0.0 45 0.0 46 0.0 47 0.0 48 0.0 49 0.0 50 0.0 51 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 51 258813.0 >>END_MODULE >>Sequence Duplication Levels warn #Total Deduplicated Percentage 50.97887373965122 #Duplication Level Percentage of deduplicated Percentage of total 1 69.73202542215547 35.54860119606213 2 11.498817828392612 11.72393564457755 3 6.164714681525553 9.42810634171396 4 3.8089914016259376 7.767123669556233 5 2.646811688816754 6.746573944841117 6 1.8391505630599432 5.625469460546478 7 1.3288203056934567 4.741923381064203 8 0.9242461166994638 3.769362087006793 9 0.6478991590992751 2.9726252484973332 >10 1.3858170605491893 8.895157032001482 >50 0.01210974527057915 0.39432667563868334 >100 0.009082308952934362 0.8376548070563419 >500 7.568590794111968E-4 0.24423560242591638 >1k 7.568590794111968E-4 1.3049049090117681 >5k 0.0 0.0 >10k+ 0.0 0.0 >>END_MODULE >>Overrepresented sequences fail #Sequence Count Percentage Possible Source CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 3382 1.3067349785366267 No Hit CGTTTTATTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 633 0.24457813170126694 No Hit CGGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 344 0.13291449811253683 No Hit >>END_MODULE >>Adapter Content fail #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 3.863793549783048E-4 0.0 0.0 0.05332035098700606 0.0 2 3.863793549783048E-4 0.0 0.0 0.21212226588308933 0.0 3 3.863793549783048E-4 0.0 0.0 0.34928693690038753 0.0 4 3.863793549783048E-4 0.0 0.0 0.4937928156622735 0.0 5 3.863793549783048E-4 0.0 0.0 0.9524251100215213 0.0 6 3.863793549783048E-4 0.0 0.0 1.4010115411513333 0.0 7 3.863793549783048E-4 0.0 0.0 1.7688446870906793 0.0 8 3.863793549783048E-4 0.0 0.0 2.485578390575435 0.0 9 3.863793549783048E-4 0.0 0.0 2.903254473306982 0.0 10 3.863793549783048E-4 0.0 0.0 3.6006692090428225 0.0 11 3.863793549783048E-4 0.0 0.0 4.164396687956169 0.0 12 3.863793549783048E-4 0.0 0.0 4.680985885562163 0.0 13 7.727587099566096E-4 0.0 0.0 4.9135862572591025 0.0 14 7.727587099566096E-4 0.0 0.0 5.039545926982029 0.0 15 7.727587099566096E-4 0.0 0.0 5.174392321869458 0.0 16 7.727587099566096E-4 0.0 0.0 5.433266489704922 0.0 17 7.727587099566096E-4 0.0 0.0 5.757052389176741 0.0 18 7.727587099566096E-4 0.0 0.0 6.135317777700502 0.0 19 7.727587099566096E-4 0.0 0.0 6.359804182942897 0.0 20 7.727587099566096E-4 0.0 0.0 6.569221793341138 0.0 21 7.727587099566096E-4 0.0 0.0 6.8389145831159945 0.0 22 7.727587099566096E-4 0.0 0.0 7.121357891605136 0.0 23 7.727587099566096E-4 0.0 0.0 7.419642753648387 0.0 24 7.727587099566096E-4 0.0 0.0 7.67194847244922 0.0 25 7.727587099566096E-4 0.0 0.0 7.887161773172136 0.0 26 7.727587099566096E-4 0.0 0.0 8.103920591314965 0.0 27 7.727587099566096E-4 0.0 0.0 8.313338201713206 0.0 28 7.727587099566096E-4 0.0 0.0 8.547870470185037 0.0 29 7.727587099566096E-4 0.0 0.0 8.783561876721803 0.0 30 7.727587099566096E-4 0.0 0.0 9.074891910375445 0.0 31 7.727587099566096E-4 0.0 0.0 9.338402630470648 0.0 32 7.727587099566096E-4 0.0 0.0 9.574866795717371 0.0 33 7.727587099566096E-4 0.0 0.0 9.82833165258314 0.0 34 7.727587099566096E-4 0.0 0.0 10.072909784284406 0.0 35 7.727587099566096E-4 0.0 0.0 10.322510847600391 0.0 36 7.727587099566096E-4 0.0 0.0 10.60070398318477 0.0 37 7.727587099566096E-4 0.0 0.0 10.858805392310279 0.0 38 7.727587099566096E-4 0.0 0.0 11.148976287898986 0.0 39 7.727587099566096E-4 0.0 0.0 11.447647529297214 0.0 >>END_MODULE >>Kmer Content warn #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position ATAGGCG 20 7.023149E-4 45.0 5 TACGGGT 20 7.023149E-4 45.0 4 CGACACC 20 7.023149E-4 45.0 35 AGGCGAT 135 0.0 45.0 7 AATGCGG 20 7.023149E-4 45.0 2 TTAAGCC 20 7.023149E-4 45.0 10 TCGACAC 20 7.023149E-4 45.0 34 CGTTTGG 20 7.023149E-4 45.0 2 CGAAGGC 20 7.023149E-4 45.0 4 CGTTTTA 205 0.0 43.90244 1 CGTTTTT 1590 0.0 43.301888 1 CGGGAAT 65 0.0 41.538464 6 GGTATGC 45 1.9183062E-8 40.000004 8 TACACGC 45 1.9183062E-8 40.000004 35 ACACGCG 40 3.444402E-7 39.375 36 TACGAAT 40 3.444402E-7 39.375 12 CGAATAT 40 3.444402E-7 39.375 14 CTGTTAT 35 6.2295458E-6 38.571426 23 CGGGATC 35 6.2295458E-6 38.571426 6 TGCGGGC 65 9.094947E-12 38.076927 4 >>END_MODULE