SRR2936560.fastq FastQC Report

Basic Statistics

Measure	Value
Filename	SRR2936560.fastq
File type	Conventional base calls
Encoding	Sanger / Illumina 1.9
Total Sequences	256066
Sequences flagged as poor quality	0
Sequence length	51
%GC	50

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	930	0.3631876156928292	No Hit
GATACTGAAGCTACGAATATACTGACTATGAAGACCTATGCTTTGATTCAT	493	0.1925284887489944	No Hit

Adapter graph

Kmer graph

Sequence	Count	PValue	Obs/Exp Max	Max Obs/Exp Position
CTTCACG	20	7.0230075E-4	45.0	23
GACAATT	20	7.0230075E-4	45.0	9
CGCATCG	25	3.8822876E-5	45.0	21
TAACGCC	25	3.8822876E-5	45.0	12
TCGATCA	25	3.8822876E-5	45.0	17
AATGACG	20	7.0230075E-4	45.0	1
GCGATAC	20	7.0230075E-4	45.0	9
TAAGGCG	20	7.0230075E-4	45.0	5
TAGGCTC	35	1.2069904E-7	45.0	6
ACACGAC	30	2.158873E-6	44.999996	26
TACGGGT	30	2.158873E-6	44.999996	4
CGTTTTA	60	3.6379788E-12	41.249996	1
AACGGGA	55	6.002665E-11	40.909092	4
ATTAGGA	45	1.9183062E-8	40.000004	4
GGGTAAC	40	3.444202E-7	39.375	7
TATGCCA	80	0.0	39.375	10
CACGACC	35	6.2292856E-6	38.571426	27
CGAGACA	35	6.2292856E-6	38.571426	22
TGTACGG	35	6.2292856E-6	38.571426	2
CGTTTTT	370	0.0	37.7027	1