##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR2936557.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 51482 Sequences flagged as poor quality 0 Sequence length 51 %GC 47 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 32.018550172875955 33.0 31.0 34.0 30.0 34.0 2 32.157899848490736 33.0 31.0 34.0 30.0 34.0 3 32.06670292529428 33.0 31.0 34.0 30.0 34.0 4 35.80037683073696 37.0 35.0 37.0 35.0 37.0 5 35.841556272095104 37.0 35.0 37.0 35.0 37.0 6 35.816615516102715 37.0 35.0 37.0 35.0 37.0 7 26.599763023969544 35.0 10.0 37.0 0.0 37.0 8 31.044850627403754 35.0 19.0 37.0 17.0 37.0 9 35.86774018103415 39.0 32.0 39.0 32.0 39.0 10 36.65673439260324 38.0 35.0 39.0 33.0 39.0 11 37.02742706188571 39.0 37.0 39.0 34.0 39.0 12 37.0551260634785 39.0 37.0 39.0 34.0 39.0 13 36.965230566023074 39.0 37.0 39.0 33.0 39.0 14 38.15587972495241 40.0 37.0 41.0 33.0 41.0 15 38.281982051979334 40.0 37.0 41.0 34.0 41.0 16 38.21316188182277 40.0 37.0 41.0 34.0 41.0 17 38.137057612369375 40.0 37.0 41.0 34.0 41.0 18 38.029719125131116 40.0 37.0 41.0 33.0 41.0 19 37.912260595936445 40.0 36.0 41.0 33.0 41.0 20 37.93461792471155 40.0 36.0 41.0 33.0 41.0 21 37.89860533778796 40.0 36.0 41.0 33.0 41.0 22 37.87440270385766 40.0 36.0 41.0 33.0 41.0 23 37.8212579153879 40.0 36.0 41.0 33.0 41.0 24 37.751602501845305 40.0 36.0 41.0 33.0 41.0 25 37.642651800629345 39.0 36.0 41.0 33.0 41.0 26 37.52047317509032 39.0 35.0 41.0 33.0 41.0 27 37.404549162814185 39.0 35.0 41.0 33.0 41.0 28 37.36051435453168 39.0 35.0 41.0 33.0 41.0 29 37.331280836020355 39.0 35.0 41.0 33.0 41.0 30 37.2149489141836 39.0 35.0 41.0 32.0 41.0 31 37.118623985082166 39.0 35.0 41.0 32.0 41.0 32 36.98092537197467 39.0 35.0 41.0 31.0 41.0 33 36.865991997202904 39.0 35.0 41.0 31.0 41.0 34 36.74556155549512 39.0 35.0 41.0 31.0 41.0 35 36.70818927003613 39.0 35.0 41.0 31.0 41.0 36 36.531137096460895 39.0 35.0 41.0 30.0 41.0 37 36.3953032127734 39.0 35.0 41.0 30.0 41.0 38 36.312050813876695 39.0 35.0 40.0 30.0 41.0 39 36.278466260052056 39.0 35.0 40.0 30.0 41.0 40 36.093430713647486 39.0 35.0 40.0 30.0 41.0 41 36.02235732877511 38.0 35.0 40.0 29.0 41.0 42 35.97233984693679 38.0 35.0 40.0 29.0 41.0 43 35.92704246144284 38.0 35.0 40.0 29.0 41.0 44 35.7296919311604 38.0 35.0 40.0 28.0 41.0 45 35.62122683656423 38.0 35.0 40.0 28.0 41.0 46 35.52853424497883 38.0 35.0 40.0 27.0 41.0 47 35.417233207723086 38.0 34.0 40.0 27.0 41.0 48 35.3507827978711 38.0 34.0 40.0 27.0 41.0 49 35.19637931704285 38.0 34.0 40.0 26.0 41.0 50 34.98098364476905 38.0 34.0 40.0 26.0 41.0 51 32.837399479429706 35.0 31.0 39.0 20.0 40.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 8 4.0 9 4.0 10 5.0 11 2.0 12 2.0 13 6.0 14 4.0 15 8.0 16 6.0 17 13.0 18 30.0 19 43.0 20 57.0 21 89.0 22 146.0 23 210.0 24 306.0 25 404.0 26 519.0 27 544.0 28 687.0 29 784.0 30 1003.0 31 1271.0 32 1619.0 33 2289.0 34 3801.0 35 4931.0 36 4900.0 37 7765.0 38 9866.0 39 10162.0 40 2.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 40.88807738627093 20.071092809137177 24.824210403636222 14.216619400955674 2 30.026028514820712 25.809020628569208 26.976418942543024 17.188531914067052 3 31.735363816479545 24.63579503515792 27.254185929062587 16.37465521929995 4 28.984887921992154 26.03239967367235 26.55879724952411 18.42391515481139 5 25.162192611009672 30.276601530632064 25.467153568237443 19.094052290120818 6 26.045996659026454 34.58684588788314 25.01651062507284 14.35064682801756 7 60.41140592828561 28.62165417038965 6.759644147469018 4.207295753855717 8 82.59780117322559 5.605842818849307 7.499708636028127 4.296647371896974 9 76.17031195369255 8.200924595004079 9.374150188415369 6.254613262887999 10 41.7310904782254 29.183015422866244 15.549123965657898 13.536770133250457 11 32.46183131968455 25.55456275979954 25.22435025834272 16.759255662173185 12 29.216036673011924 23.320772308768113 27.86022299055981 19.602968027660154 13 24.319179519055204 27.67569247503982 28.21180218328736 19.793325822617614 14 20.205120236199058 30.179480206674175 27.937920049726117 21.677479507400648 15 19.212540305349442 25.803193349131735 35.05691309583932 19.9273532496795 16 21.1413697991531 24.37550988695078 33.24462919078513 21.23849112311099 17 22.32430752496018 24.02004584126491 29.035391010450258 24.620255623324656 18 23.796666796161762 25.152480478613885 29.528767336156324 21.522085389068025 19 25.387514082591974 26.183908939046656 26.397575851754013 22.031001126607357 20 26.593760926148946 25.622547686570062 27.95540188803854 19.828289499242455 21 24.171555106639214 26.795773279981354 28.124392991725262 20.90827862165417 22 23.07214171943592 25.168019890447148 27.087137251855015 24.672701138261914 23 22.45250767258459 27.724253137018763 27.4833922536032 22.339846936793442 24 22.050425391398935 24.909677168719163 30.08818616215376 22.951711277728137 25 20.58777825259314 27.667922769123187 28.270074977662098 23.474224000621575 26 20.469290237364515 29.78711005788431 26.85210364787693 22.891496056874246 27 21.23849112311099 29.132512334408144 27.57857115108193 22.050425391398935 28 19.81469251388835 28.58669049376481 30.19501961850744 21.4035973738394 29 21.428848918068454 27.116273649042384 29.07423954003341 22.380637892855756 30 22.060137523794722 27.524183209665516 28.949924245367313 21.46575502117245 31 24.309467386659414 27.30080416456237 25.925566217318675 22.46416223145954 32 24.82615283011538 28.227341595120624 26.0945573210054 20.851948253758597 33 23.612136280641778 27.95540188803854 26.751097470960723 21.68136436035896 34 21.82121906685832 27.652383357289928 27.370731517812054 23.155666058039703 35 23.19451458762286 26.290742395400336 28.068062623829686 22.44668039314712 36 23.899615399557128 27.27749504681248 27.836913872809916 20.98597568082048 37 22.91286274814498 28.299211374849463 28.340002330911773 20.44792354609378 38 23.788897090245133 26.665630705877785 26.61707004389884 22.928402159978244 39 23.98508216464007 26.32959092498349 27.846626005205703 21.83870090517074 40 24.517307019929298 25.274853346800825 29.28984887921992 20.91799075404996 41 21.30647604988151 25.65168408375743 28.516763140515135 24.525076725845928 42 23.42760576512179 26.011032982401616 26.93562798648071 23.625733265995883 43 24.185152091993317 26.424769822462217 26.786061147585567 22.6040169379589 44 21.287051785089933 27.50281651839478 27.611592401227615 23.598539295287672 45 22.149489141835982 27.55137718037372 26.98807350141797 23.311060176372326 46 23.169263043393805 27.147352472708906 27.51058622431141 22.172798259585875 47 21.426906491589293 27.186201002292066 28.97129093663805 22.415601569480597 48 23.221708558331066 25.288450332154927 28.58086321432734 22.908977895186666 49 22.180567965502508 24.690182976574338 29.402509615011073 23.726739442912088 50 20.42072957538557 26.54714269064916 29.202439687657822 23.82968804630745 51 20.38770832523989 26.240239306942232 27.73008041645624 25.64197195136164 >>END_MODULE >>Per sequence GC content warn #GC Content Count 0 32.0 1 65.0 2 98.0 3 171.0 4 244.0 5 183.0 6 122.0 7 116.5 8 111.0 9 119.0 10 127.0 11 122.0 12 117.0 13 125.0 14 133.0 15 126.0 16 119.0 17 122.0 18 125.0 19 121.0 20 117.0 21 152.0 22 187.0 23 235.5 24 284.0 25 316.0 26 452.0 27 556.0 28 633.5 29 711.0 30 847.5 31 984.0 32 1073.0 33 1162.0 34 1308.5 35 1455.0 36 1571.0 37 1687.0 38 1839.5 39 1992.0 40 2313.5 41 2635.0 42 3004.0 43 3373.0 44 3671.0 45 3969.0 46 4314.0 47 4659.0 48 4713.0 49 4767.0 50 4576.5 51 4386.0 52 3898.5 53 3411.0 54 3061.0 55 2711.0 56 2513.5 57 2316.0 58 2208.5 59 2101.0 60 1924.5 61 1748.0 62 1628.5 63 1509.0 64 1308.5 65 1108.0 66 908.5 67 709.0 68 571.0 69 433.0 70 378.0 71 323.0 72 283.5 73 244.0 74 188.0 75 113.5 76 95.0 77 74.0 78 53.0 79 43.5 80 34.0 81 27.5 82 21.0 83 19.0 84 17.0 85 12.0 86 7.0 87 5.0 88 3.0 89 3.0 90 3.0 91 3.0 92 3.0 93 2.0 94 1.0 95 0.5 96 0.0 97 0.0 98 0.0 99 0.0 100 0.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 44 0.0 45 0.0 46 0.0 47 0.0 48 0.0 49 0.0 50 0.0 51 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 51 51482.0 >>END_MODULE >>Sequence Duplication Levels warn #Total Deduplicated Percentage 58.89825570102172 #Duplication Level Percentage of deduplicated Percentage of total 1 70.59560714992415 41.57958121285109 2 13.211529582481365 15.562720951012004 3 6.787151243321681 11.992541082320034 4 3.8783721390409602 9.137174157958121 5 2.4635578128091815 7.254962899654248 6 1.2960886485060352 4.580241637854007 7 0.7750148407097157 3.1952915582145214 8 0.43532748499439355 2.0512023619905984 9 0.17479058109623374 0.9265374305582533 >10 0.3627729041619946 2.8340002330911775 >50 0.016489677461908846 0.6798492677052174 >100 0.0032979354923817687 0.205897206790723 >500 0.0 0.0 >1k 0.0 0.0 >5k 0.0 0.0 >10k+ 0.0 0.0 >>END_MODULE >>Overrepresented sequences warn #Sequence Count Percentage Possible Source CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 106 0.205897206790723 No Hit GATACTGAAGCTACGAATATACTGACTATGAAGACCTATGCTTTGATTCAT 79 0.15345169185346336 No Hit CCTGTCTCTTATACACATCTGACGCAACGTTGGTCGTATGCCGTCTTCTGC 77 0.14956683889514782 No Hit GCTGTCTCTTATACACATCTGACGCAACGTTGGTCGTATGCCGTCTTCTGC 71 0.13791228002020123 No Hit CTGTCTCTTATACACATCTGACGCAACGTTGGTCGTATGCCGTCTTCTGCT 64 0.12431529466609689 Illumina Single End Adapter 2 (95% over 21bp) GAATGATACCTGTCTCTTATACACATCTGACGCAACGTTGGTCGTATGCCG 59 0.11460316227030808 No Hit >>END_MODULE >>Adapter Content fail #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.16510625072840993 0.0 2 0.0 0.0 0.0 0.6390583116429043 0.0 3 0.0 0.0 0.0 0.8527252243502583 0.0 4 0.0 0.0 0.0 1.1246649314323454 0.0 5 0.0 0.0 0.0 1.8977506701371354 0.0 6 0.0 0.0 0.0 2.360048172176683 0.0 7 0.0 0.0 0.0 2.804863835903811 0.0 8 0.0 0.0 0.0 3.818810458024164 0.0 9 0.0 0.0 0.0 4.257798842313818 0.0 10 0.0 0.0 0.0 5.219299949496912 0.0 11 0.0 0.0 0.0 6.128355541742745 0.0 12 0.0 0.0 0.0 7.017986869197001 0.0 13 0.0 0.0 0.0 7.3326599588205585 0.0 14 0.0 0.0 0.0 7.451147974049182 0.0 15 0.0 0.0 0.0 7.6900664309855875 0.0 16 0.0 0.0 0.0 8.167903344858397 0.0 17 0.0 0.0 0.0 8.69624334718931 0.0 18 0.0 0.0 0.0 9.40717143856105 0.0 19 0.0 0.0 0.0 9.67716871916398 0.0 20 0.0 0.0 0.0 10.052057029641428 0.0 21 0.0 0.0 0.0 10.42500291363972 0.0 22 0.0 0.0 0.0 10.82320034186706 0.0 23 0.0 0.0 0.0 11.14370071092809 0.0 24 0.0 0.0 0.0 11.470028359426596 0.0 25 0.0 0.0 0.0 11.749737772425314 0.0 26 0.0 0.0 0.0 11.990598655840877 0.0 27 0.0 0.0 0.0 12.25671108348549 0.0 28 0.0 0.0 0.0 12.52670836408842 0.0 29 0.0 0.0 0.0 12.81224505652461 0.0 30 0.0 0.0 0.0 13.2220970436269 0.0 31 0.0 0.0 0.0 13.529000427333825 0.0 32 0.0 0.0 0.0 13.835903811040753 0.0 33 0.0 0.0 0.0 14.144749621226836 0.0 34 0.0 0.0 0.0 14.41863175478808 0.0 35 0.0 0.0 0.0 14.70611087370343 0.0 36 0.0 0.0 0.0 15.02855366924362 0.0 37 0.0 0.0 0.0 15.310205508721495 0.0 38 0.0 0.0 0.0 15.609339186511791 0.0 39 0.0 0.0 0.0 15.953148673322715 0.0 >>END_MODULE >>Kmer Content fail #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position TGACTAT 30 2.125198E-6 45.000004 23 TAGGGAC 30 2.125198E-6 45.000004 5 CCTATGC 35 1.1819611E-7 45.0 35 TCAAGGG 20 6.9705734E-4 45.0 4 CTGGGTT 25 3.838919E-5 45.0 5 AAGGGTG 20 6.9705734E-4 45.0 6 GCTACGA 35 1.1819611E-7 45.0 10 TACGAAT 35 1.1819611E-7 45.0 12 CTACGAA 35 1.1819611E-7 45.0 11 CTATGAA 35 1.1819611E-7 45.0 26 CCCCACG 20 6.9705734E-4 45.0 38 TTGCTAG 20 6.9705734E-4 45.0 1 GCCCCCC 20 6.9705734E-4 45.0 35 AGGGATA 55 5.820766E-11 40.909092 6 TCAGGGG 40 3.3731703E-7 39.375 4 AGCTACG 40 3.3731703E-7 39.375 9 CGAATAT 40 3.3731703E-7 39.375 14 AGACCTA 40 3.3731703E-7 39.375 32 ACCTATG 40 3.3731703E-7 39.375 34 ACTATGA 40 3.3731703E-7 39.375 25 >>END_MODULE